RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 A1CFQ9NQ94 594 aaKnown RBP8.19□□□□□ -1.1
LIN7A-202ENST00000549417 INCENPQ9NQS7 918 aa8.19□□□□□ -1.1
LIN7A-202ENST00000549417 SWAP70Q9UH65 585 aa8.19□□□□□ -1.1
LIN7A-202ENST00000549417 BAZ2AQ9UIF9 1905 aaKnown RBP8.19□□□□□ -1.1
LIN7A-202ENST00000549417 MICAL3Q7RTP6 2002 aa8.19□□□□□ -1.1
LIN7A-202ENST00000549417 UPP2O95045 317 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 CDK8P49336 464 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 NDUFV1P49821 464 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 CPT1AP50416 773 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 LRRFIP1Q32MZ4 808 aaKnown RBP8.18□□□□□ -1.1
LIN7A-202ENST00000549417 TNNI3KQ59H18 835 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 NFRKBQ6P4R8 1299 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 KIAA2013Q8IYS2 634 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 CCDC155Q8N6L0 562 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 TMEM105Q8N8V8 129 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 CHST13Q8NET6 341 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 AFAP1L1Q8TED9 768 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 DHX38Q92620 1227 aaKnown RBP8.18□□□□□ -1.1
LIN7A-202ENST00000549417 MS4A3Q96HJ5 214 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 CTAGE1Q96RT6 745 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 YME1L1Q96TA2 773 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 WDR11Q9BZH6 1224 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 CRNKL1Q9BZJ0 848 aaKnown RBP8.18□□□□□ -1.1
LIN7A-202ENST00000549417 ACAD9Q9H845 621 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 KANSL2Q9H9L4 492 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 SLC38A10Q9HBR0 1119 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 DCP1AQ9NPI6 582 aaPredicted RBP8.18□□□□□ -1.1
LIN7A-202ENST00000549417 TLR7Q9NYK1 1049 aaKnown RBP8.18□□□□□ -1.1
LIN7A-202ENST00000549417 FBXO40Q9UH90 709 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 Q9Y3F1 56 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 FPGT-TNNI3KV9GXZ4 949 aa8.18□□□□□ -1.1
LIN7A-202ENST00000549417 CHD6Q8TD26 2715 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 USP17L12C9JPN9 530 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 USP17L21D6R901 530 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 ATP2A1O14983 1001 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 GRM6O15303 877 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 NCK2O43639 380 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 PRKAB2O43741 272 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 NDUFB10O96000 172 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 CXCL10P02778 98 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 CKBP12277 381 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 SP100P23497 879 aaPredicted RBP8.17□□□□□ -1.1
LIN7A-202ENST00000549417 CTNNB1P35222 781 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 RRP1P56182 461 aaKnown RBP8.17□□□□□ -1.1
LIN7A-202ENST00000549417 HTRA4P83105 476 aaPredicted RBP8.17□□□□□ -1.1
LIN7A-202ENST00000549417 DUSP28Q4G0W2 176 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 GDF6Q6KF10 455 aaPredicted RBP8.17□□□□□ -1.1
LIN7A-202ENST00000549417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.17□□□□□ -1.1
LIN7A-202ENST00000549417 ZBTB33Q86T24 672 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 FBXO11Q86XK2 927 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 STK11IPQ8N1F8 1099 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 LCORLQ8N3X6 602 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 CAGE1Q8TC20 777 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 COPS5Q92905 334 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 RNF146Q9NTX7 359 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 ISY1Q9ULR0 285 aaKnown RBP8.17□□□□□ -1.1
LIN7A-202ENST00000549417 LCTP09848 1927 aa8.17□□□□□ -1.1
LIN7A-202ENST00000549417 PNMA6EA0A0J9YXQ4 647 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 F5H6K3 240 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 ACACBO00763 2458 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 LGR5O75473 907 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 AMHP03971 560 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 ALAS1P13196 640 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 SNAP25P60880 206 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 KLRC3Q07444 240 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 ADAM15Q13444 863 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 ST3GAL2Q16842 350 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 KCNG4Q8TDN1 519 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 MSLNLQ96KJ4 702 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 CCDC17Q96LX7 622 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 RIPOR3Q96MK2 946 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 SAMD11Q96NU1 681 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 CCDC8Q9H0W5 538 aaPredicted RBP8.16□□□□□ -1.1
LIN7A-202ENST00000549417 VTA1Q9NP79 307 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 PLSCR2Q9NRY7 297 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 SMC4Q9NTJ3 1288 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 DBNLQ9UJU6 430 aaKnown RBP8.16□□□□□ -1.1
LIN7A-202ENST00000549417 HDAC5Q9UQL6 1122 aa8.16□□□□□ -1.1
LIN7A-202ENST00000549417 USP15Q9Y4E8 981 aaPredicted RBP8.16□□□□□ -1.1
LIN7A-202ENST00000549417 EP300Q09472 2414 aaPredicted RBP8.15□□□□□ -1.1
LIN7A-202ENST00000549417 CHD8Q9HCK8 2581 aa8.15□□□□□ -1.1
LIN7A-202ENST00000549417 EFCAB14O75071 495 aa8.15□□□□□ -1.1
LIN7A-202ENST00000549417 PTPN11Q06124 597 aaPredicted RBP8.15□□□□□ -1.1
LIN7A-202ENST00000549417 OS9Q13438 667 aaPredicted RBP8.15□□□□□ -1.1
LIN7A-202ENST00000549417 MBTPS1Q14703 1052 aa8.15□□□□□ -1.1
LIN7A-202ENST00000549417 CBX2Q14781 532 aaPredicted RBP8.15□□□□□ -1.1
LIN7A-202ENST00000549417 PTPN21Q16825 1174 aa8.15□□□□□ -1.1
LIN7A-202ENST00000549417 SLFNL1Q499Z3 407 aa8.15□□□□□ -1.1
LIN7A-202ENST00000549417 BRDTQ58F21 947 aaPredicted RBP8.15□□□□□ -1.1
LIN7A-202ENST00000549417 MUM1L1Q5H9M0 696 aa8.15□□□□□ -1.1
LIN7A-202ENST00000549417 ZNF618Q5T7W0 954 aa8.15□□□□□ -1.1
LIN7A-202ENST00000549417 MCTP2Q6DN12 878 aa8.15□□□□□ -1.1
LIN7A-202ENST00000549417 NSMFQ6X4W1 530 aa8.15□□□□□ -1.1
LIN7A-202ENST00000549417 RASEFQ8IZ41 740 aa8.15□□□□□ -1.1
LIN7A-202ENST00000549417 SMRP1Q8NCR6 262 aa8.15□□□□□ -1.1
LIN7A-202ENST00000549417 WNT8BQ93098 351 aa8.15□□□□□ -1.1
LIN7A-202ENST00000549417 KIF12Q96FN5 646 aa8.15□□□□□ -1.1
LIN7A-202ENST00000549417 TRERF1Q96PN7 1200 aa8.15□□□□□ -1.1
LIN7A-202ENST00000549417 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.15□□□□□ -1.1
LIN7A-202ENST00000549417 ARMT1Q9H993 441 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms