RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 TMCO3Q6UWJ1 677 aa19.8■□□□□ 0.76
SCARB1-208ENST00000544327 PODNQ7Z5L7 613 aa19.8■□□□□ 0.76
SCARB1-208ENST00000544327 SRGAP1Q7Z6B7 1085 aa19.8■□□□□ 0.76
SCARB1-208ENST00000544327 CEP112Q8N8E3 955 aa19.8■□□□□ 0.76
SCARB1-208ENST00000544327 MKL1Q969V6 931 aa19.8■□□□□ 0.76
SCARB1-208ENST00000544327 MXD3Q9BW11 206 aa19.8■□□□□ 0.76
SCARB1-208ENST00000544327 ATF5Q9Y2D1 282 aaPredicted RBP19.8■□□□□ 0.76
SCARB1-208ENST00000544327 FHOD1Q9Y613 1164 aa19.8■□□□□ 0.76
SCARB1-208ENST00000544327 A0A1W2PQJ5 194 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 CRKP46108 304 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 SCNN1DP51172 638 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 HDLBPQ00341 1268 aaKnown RBP19.79■□□□□ 0.76
SCARB1-208ENST00000544327 EHHADHQ08426 723 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 PSMD2Q13200 908 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 MCM6Q14566 821 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 MIIPQ5JXC2 388 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 KRT79Q5XKE5 535 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 TTBK2Q6IQ55 1244 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 GUF1Q8N442 669 aaKnown RBP19.79■□□□□ 0.76
SCARB1-208ENST00000544327 CDK5RAP3Q96JB5 506 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 CHP1Q99653 195 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 DHX36Q9H2U1 1008 aaKnown RBP19.79■□□□□ 0.76
SCARB1-208ENST00000544327 SEMA6BQ9H3T3 888 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 REXO2Q9Y3B8 237 aaKnown RBP19.79■□□□□ 0.76
SCARB1-208ENST00000544327 RASSF10A6NK89 507 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 TNNI2P48788 182 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 CDK17Q00537 523 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 SEPT2Q15019 361 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 TSR1Q2NL82 804 aaKnown RBP19.79■□□□□ 0.76
SCARB1-208ENST00000544327 HYIQ5T013 277 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 WDR59Q6PJI9 974 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 COL23A1Q86Y22 540 aaPredicted RBP19.79■□□□□ 0.76
SCARB1-208ENST00000544327 SLC35F6Q8N357 371 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 DCAF4Q8WV16 495 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 NAPGQ99747 312 aaPredicted RBP19.79■□□□□ 0.76
SCARB1-208ENST00000544327 SLF1Q9BQI6 1058 aa19.79■□□□□ 0.76
SCARB1-208ENST00000544327 TMX4Q9H1E5 349 aaPredicted RBP19.79■□□□□ 0.76
SCARB1-208ENST00000544327 ZBED6P86452 979 aa19.78■□□□□ 0.76
SCARB1-208ENST00000544327 TBC1D8BQ0IIM8 1120 aa19.78■□□□□ 0.76
SCARB1-208ENST00000544327 CCDC96Q2M329 555 aa19.78■□□□□ 0.76
SCARB1-208ENST00000544327 SNX29Q8TEQ0 813 aa19.78■□□□□ 0.76
SCARB1-208ENST00000544327 IDI2Q9BXS1 227 aa19.78■□□□□ 0.76
SCARB1-208ENST00000544327 HAUS4Q9H6D7 363 aa19.78■□□□□ 0.76
SCARB1-208ENST00000544327 PRDM10Q9NQV6 1147 aa19.78■□□□□ 0.76
SCARB1-208ENST00000544327 NYAP2Q9P242 653 aa19.78■□□□□ 0.76
SCARB1-208ENST00000544327 MYH7BA7E2Y1 1941 aa19.78■□□□□ 0.76
SCARB1-208ENST00000544327 ARFGEF1Q9Y6D6 1849 aa19.77■□□□□ 0.76
SCARB1-208ENST00000544327 USP17L10C9JJH3 530 aa19.77■□□□□ 0.76
SCARB1-208ENST00000544327 FGFR1OPO95684 399 aaKnown RBP19.77■□□□□ 0.76
SCARB1-208ENST00000544327 PNMA6AP0CW24 399 aaPredicted RBP19.77■□□□□ 0.76
SCARB1-208ENST00000544327 MTIF2P46199 727 aaKnown RBP19.77■□□□□ 0.76
SCARB1-208ENST00000544327 NFIAQ12857 509 aa19.77■□□□□ 0.76
SCARB1-208ENST00000544327 UBE2SQ16763 222 aa19.77■□□□□ 0.76
SCARB1-208ENST00000544327 TEX35Q5T0J7 233 aa19.77■□□□□ 0.76
SCARB1-208ENST00000544327 FLAD1Q8NFF5 587 aa19.77■□□□□ 0.76
SCARB1-208ENST00000544327 HAS1Q92839 578 aa19.77■□□□□ 0.76
SCARB1-208ENST00000544327 ZMYND15Q9H091 742 aa19.77■□□□□ 0.76
SCARB1-208ENST00000544327 DNAJC18Q9H819 358 aa19.77■□□□□ 0.76
SCARB1-208ENST00000544327 DDX25Q9UHL0 483 aaKnown RBP19.77■□□□□ 0.76
SCARB1-208ENST00000544327 POTEMA6NI47 508 aa19.76■□□□□ 0.75
SCARB1-208ENST00000544327 PLSCR1O15162 318 aa19.76■□□□□ 0.75
SCARB1-208ENST00000544327 CHMP4BP1P59074 171 aa19.76■□□□□ 0.75
SCARB1-208ENST00000544327 LRRC63Q05C16 580 aa19.76■□□□□ 0.75
SCARB1-208ENST00000544327 WHAMMP3Q1A5X7 153 aa19.76■□□□□ 0.75
SCARB1-208ENST00000544327 KIF4BQ2VIQ3 1234 aa19.76■□□□□ 0.75
SCARB1-208ENST00000544327 CCDC170Q8IYT3 715 aa19.76■□□□□ 0.75
SCARB1-208ENST00000544327 NOC4LQ9BVI4 516 aaKnown RBP19.76■□□□□ 0.75
SCARB1-208ENST00000544327 PSTPIP2Q9H939 334 aa19.76■□□□□ 0.75
SCARB1-208ENST00000544327 SLC39A2Q9NP94 309 aa19.76■□□□□ 0.75
SCARB1-208ENST00000544327 G3V3G9 751 aa19.76■□□□□ 0.75
SCARB1-208ENST00000544327 MPHOSPH10O00566 681 aaKnown RBP19.76■□□□□ 0.75
SCARB1-208ENST00000544327 FKBP15Q5T1M5 1219 aa19.76■□□□□ 0.75
SCARB1-208ENST00000544327 DCAF8Q5TAQ9 597 aa19.76■□□□□ 0.75
SCARB1-208ENST00000544327 STRIP1Q5VSL9 837 aa19.76■□□□□ 0.75
SCARB1-208ENST00000544327 MBOAT7Q96N66 472 aa19.76■□□□□ 0.75
SCARB1-208ENST00000544327 NUDT12Q9BQG2 462 aa19.76■□□□□ 0.75
SCARB1-208ENST00000544327 KDM3AQ9Y4C1 1321 aa19.75■□□□□ 0.75
SCARB1-208ENST00000544327 POTEB2H3BUK9 544 aa19.75■□□□□ 0.75
SCARB1-208ENST00000544327 PES1O00541 588 aaKnown RBP19.75■□□□□ 0.75
SCARB1-208ENST00000544327 KRT83P78385 493 aa19.75■□□□□ 0.75
SCARB1-208ENST00000544327 AMPD2Q01433 879 aa19.75■□□□□ 0.75
SCARB1-208ENST00000544327 KANSL2Q9H9L4 492 aa19.75■□□□□ 0.75
SCARB1-208ENST00000544327 ZNHIT6Q9NWK9 470 aaKnown RBP19.75■□□□□ 0.75
SCARB1-208ENST00000544327 CYP3A7-CYP3A51PA0A087WV96 503 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 ABL1P00519 1130 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 TRIM21P19474 475 aaKnown RBP19.74■□□□□ 0.75
SCARB1-208ENST00000544327 CYP3A7P24462 503 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 HNRNPH3P31942 346 aaKnown RBP19.74■□□□□ 0.75
SCARB1-208ENST00000544327 CYLC1P35663 651 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-208ENST00000544327 SLC16A2P36021 539 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 USP11P51784 963 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 HERVK_113P62684 666 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 CC2D1AQ6P1N0 951 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-208ENST00000544327 TATDN1Q6P1N9 297 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 MOXD1Q6UVY6 613 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 KCTD1Q719H9 257 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 ZFPM1Q8IX07 1006 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 HPS3Q969F9 1004 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 PARD6BQ9BYG5 372 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 PI4KBQ9UBF8 816 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms