RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CUEDC2Q9H467 287 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 KAT14Q9H8E8 782 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 MAGEF1Q9HAY2 307 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 MCM9Q9NXL9 1143 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 TFCP2L1Q9NZI6 479 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 CAPN11Q9UMQ6 739 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 GDAQ9Y2T3 454 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 EPN1Q9Y6I3 576 aaPredicted RBP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 DDX60LQ5H9U9 1706 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 MYH8P13535 1937 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 FLT1P17948 1338 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 TTC26A0AVF1 554 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 CCDC66A2RUB6 948 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 PSMD14O00487 310 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 COBLO75128 1261 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 RPS6KA4O75676 772 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 NDUFA10O95299 355 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 TUBBP07437 444 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 SRGNP10124 158 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 SMARCA1P28370 1054 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 OAS2P29728 719 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 NOVP48745 357 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 PMS1P54277 932 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 MEA1Q16626 185 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 KIF4BQ2VIQ3 1234 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 WDR59Q6PJI9 974 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 C15orf52Q6ZUT6 534 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 TXNRD3Q86VQ6 643 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 CCDC148Q8NFR7 591 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 OR8K1Q8NGG5 319 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 GPKOWQ92917 476 aaPredicted RBP eCLIP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 DHTKD1Q96HY7 919 aaPredicted RBP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 AK8Q96MA6 479 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 PNKPQ96T60 521 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 CHP1Q99653 195 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 DUSP9Q99956 384 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 TTYH3Q9C0H2 523 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 ZMYND12Q9H0C1 365 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 BARHL2Q9NY43 387 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 PSD3Q9NYI0 1048 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 L1RE1Q9UN81 338 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 USTQ9Y2C2 406 aa5.83□□□□□ -1.48
ATPAF1-212ENST00000542495 TNRC6CQ9HCJ0 1690 aaKnown RBP5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 NAV1Q8NEY1 1877 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 CCDC194A0A1B0GVG4 234 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 TRIM49BA6NDI0 452 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 RASSF10A6NK89 507 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 PP2D1A8MPX8 630 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 COL9A1P20849 921 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 DNM2P50570 870 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 HERVK_113P62684 666 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 UBXN1Q04323 297 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 KCNA1Q09470 495 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 ORC2Q13416 577 aaPredicted RBP5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 PRPF38BQ5VTL8 546 aaKnown RBP5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 TRAPPC11Q7Z392 1133 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 ZSCAN29Q8IWY8 852 aaPredicted RBP5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 WDR66Q8TBY9 1149 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 RASGRP4Q8TDF6 673 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 SH3RF3Q8TEJ3 882 aaPredicted RBP5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 DYNLL2Q96FJ2 89 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 SETDB2Q96T68 719 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 NUP88Q99567 741 aaPredicted RBP5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 C7orf25Q9BPX7 421 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 SLF1Q9BQI6 1058 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 TMEM47Q9BQJ4 181 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 SPZ1Q9BXG8 430 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 HAUS4Q9H6D7 363 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 PUF60Q9UHX1 559 aaKnown RBP5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 TSKSQ9UJT2 592 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 SNED1Q8TER0 1413 aa5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 BAZ2BQ9UIF8 2168 aaKnown RBP5.82□□□□□ -1.48
ATPAF1-212ENST00000542495 MYH1P12882 1939 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 CDK5RAP2Q96SN8 1893 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 A0A1W2PQJ5 194 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 CTAGE15A4D2H0 777 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 USP17L3A6NCW0 530 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 USP17L4A6NCW7 530 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 H3BQF6 201 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 PSMA7O14818 248 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 LDHBP07195 334 aaKnown RBP5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 NUDT7P0C024 238 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 CTAGE8P0CG41 777 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 RASA1P20936 1047 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 RFX1P22670 979 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 CCNE1P24864 410 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 DNAJB2P25686 324 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 UBA7P41226 1012 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 PPP1R2P41236 205 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 GSTO1P78417 241 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 CDK17Q00537 523 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 STIM1Q13586 685 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 INF2Q27J81 1249 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 FIGNQ5HY92 759 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 PAPD7Q5XG87 772 aaKnown RBP5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 GPR153Q6NV75 609 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 WDR93Q6P2C0 686 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 TPTE2Q6XPS3 522 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 BICDL1Q6ZP65 573 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 USP17L1Q7RTZ2 530 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms