RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 NOP9Q86U38 636 aaKnown RBP11.35□□□□□ -0.59
MRPS35-204ENST00000542199 SLC51AQ86UW1 340 aa11.35□□□□□ -0.59
MRPS35-204ENST00000542199 UNC5CLQ8IV45 518 aa11.35□□□□□ -0.59
MRPS35-204ENST00000542199 PPP1R14AQ96A00 147 aa11.35□□□□□ -0.59
MRPS35-204ENST00000542199 APBA2Q99767 749 aa11.35□□□□□ -0.59
MRPS35-204ENST00000542199 DUSP15Q9H1R2 295 aaPredicted RBP11.35□□□□□ -0.59
MRPS35-204ENST00000542199 NOL6Q9H6R4 1146 aaKnown RBP11.35□□□□□ -0.59
MRPS35-204ENST00000542199 WHRNQ9P202 907 aa11.35□□□□□ -0.59
MRPS35-204ENST00000542199 ZMYM5Q9UJ78 669 aa11.35□□□□□ -0.59
MRPS35-204ENST00000542199 RGPD8O14715 1765 aaPredicted RBP11.34□□□□□ -0.59
MRPS35-204ENST00000542199 SIGLEC6O43699 453 aa11.34□□□□□ -0.59
MRPS35-204ENST00000542199 SRFP11831 508 aa11.34□□□□□ -0.59
MRPS35-204ENST00000542199 NOL9Q5SY16 702 aaKnown RBP11.34□□□□□ -0.59
MRPS35-204ENST00000542199 LILRB2Q8N423 598 aa11.34□□□□□ -0.59
MRPS35-204ENST00000542199 NETO1Q8TDF5 533 aa11.34□□□□□ -0.59
MRPS35-204ENST00000542199 HDAC8Q9BY41 377 aa11.34□□□□□ -0.59
MRPS35-204ENST00000542199 GPR62Q9BZJ7 368 aa11.34□□□□□ -0.59
MRPS35-204ENST00000542199 KANSL2Q9H9L4 492 aa11.34□□□□□ -0.59
MRPS35-204ENST00000542199 SUGT1Q9Y2Z0 365 aa11.34□□□□□ -0.59
MRPS35-204ENST00000542199 ATP7BP35670 1465 aa11.33□□□□□ -0.6
MRPS35-204ENST00000542199 GPRASP1Q5JY77 1395 aa11.33□□□□□ -0.6
MRPS35-204ENST00000542199 TBX1O43435 398 aa11.33□□□□□ -0.6
MRPS35-204ENST00000542199 IFI16Q16666 785 aaKnown RBP11.33□□□□□ -0.6
MRPS35-204ENST00000542199 FIBCD1Q8N539 461 aa11.33□□□□□ -0.6
MRPS35-204ENST00000542199 CHST7Q9NS84 486 aa11.33□□□□□ -0.6
MRPS35-204ENST00000542199 FHOD1Q9Y613 1164 aa11.33□□□□□ -0.6
MRPS35-204ENST00000542199 RALGAPBQ86X10 1494 aa11.32□□□□□ -0.6
MRPS35-204ENST00000542199 ARHGEF28Q8N1W1 1705 aaKnown RBP11.32□□□□□ -0.6
MRPS35-204ENST00000542199 MARF1Q9Y4F3 1742 aaKnown RBP11.32□□□□□ -0.6
MRPS35-204ENST00000542199 PPM1BO75688 479 aa11.32□□□□□ -0.6
MRPS35-204ENST00000542199 NAT2P11245 290 aa11.32□□□□□ -0.6
MRPS35-204ENST00000542199 SSRP1Q08945 709 aaKnown RBP11.32□□□□□ -0.6
MRPS35-204ENST00000542199 PPP2R5DQ14738 602 aa11.32□□□□□ -0.6
MRPS35-204ENST00000542199 ASCC2Q9H1I8 757 aaPredicted RBP11.32□□□□□ -0.6
MRPS35-204ENST00000542199 EPN3Q9H201 632 aa11.32□□□□□ -0.6
MRPS35-204ENST00000542199 SEMA3GQ9NS98 782 aa11.32□□□□□ -0.6
MRPS35-204ENST00000542199 ZSWIM5Q9P217 1185 aa11.32□□□□□ -0.6
MRPS35-204ENST00000542199 CGGBP1Q9UFW8 167 aaPredicted RBP11.32□□□□□ -0.6
MRPS35-204ENST00000542199 MRPL42Q9Y6G3 142 aaKnown RBP11.32□□□□□ -0.6
MRPS35-204ENST00000542199 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.32□□□□□ -0.6
MRPS35-204ENST00000542199 KIAA1210Q9ULL0 1709 aa11.32□□□□□ -0.6
MRPS35-204ENST00000542199 FAM83GA6ND36 823 aa11.31□□□□□ -0.6
MRPS35-204ENST00000542199 H0Y8X5 98 aa11.31□□□□□ -0.6
MRPS35-204ENST00000542199 ITGAVP06756 1048 aa11.31□□□□□ -0.6
MRPS35-204ENST00000542199 CTSKP43235 329 aa11.31□□□□□ -0.6
MRPS35-204ENST00000542199 CLCN7P51798 805 aa11.31□□□□□ -0.6
MRPS35-204ENST00000542199 VPS72Q15906 364 aa11.31□□□□□ -0.6
MRPS35-204ENST00000542199 MSMPQ1L6U9 139 aa11.31□□□□□ -0.6
MRPS35-204ENST00000542199 CLEC16AQ2KHT3 1053 aa11.31□□□□□ -0.6
MRPS35-204ENST00000542199 ZNF227Q86WZ6 799 aa11.31□□□□□ -0.6
MRPS35-204ENST00000542199 LRRN4CLQ8ND94 238 aa11.31□□□□□ -0.6
MRPS35-204ENST00000542199 NGDNQ8NEJ9 315 aaKnown RBP11.31□□□□□ -0.6
MRPS35-204ENST00000542199 SYTL5Q8TDW5 730 aaPredicted RBP11.31□□□□□ -0.6
MRPS35-204ENST00000542199 DSCC1Q9BVC3 393 aa11.31□□□□□ -0.6
MRPS35-204ENST00000542199 CDK19Q9BWU1 502 aa11.31□□□□□ -0.6
MRPS35-204ENST00000542199 TRPM3Q9HCF6 1732 aaPredicted RBP11.31□□□□□ -0.6
MRPS35-204ENST00000542199 KDM2BQ8NHM5 1336 aa11.31□□□□□ -0.6
MRPS35-204ENST00000542199 A0A1W2PQU0 124 aa11.3□□□□□ -0.6
MRPS35-204ENST00000542199 SMARCA5O60264 1052 aaPredicted RBP11.3□□□□□ -0.6
MRPS35-204ENST00000542199 CRTC3Q6UUV7 619 aa11.3□□□□□ -0.6
MRPS35-204ENST00000542199 UBE2FQ969M7 185 aa11.3□□□□□ -0.6
MRPS35-204ENST00000542199 ZDHHC15Q96MV8 337 aa11.3□□□□□ -0.6
MRPS35-204ENST00000542199 PRR13Q9NZ81 148 aa11.3□□□□□ -0.6
MRPS35-204ENST00000542199 PITPNM2Q9BZ72 1349 aa11.3□□□□□ -0.6
MRPS35-204ENST00000542199 POLR3AO14802 1390 aaPredicted RBP11.29□□□□□ -0.6
MRPS35-204ENST00000542199 GLI3P10071 1580 aa11.29□□□□□ -0.6
MRPS35-204ENST00000542199 NLGN1Q8N2Q7 840 aa11.29□□□□□ -0.6
MRPS35-204ENST00000542199 ARHGEF39Q8N4T4 335 aa11.29□□□□□ -0.6
MRPS35-204ENST00000542199 BVESQ8NE79 360 aa11.29□□□□□ -0.6
MRPS35-204ENST00000542199 RNPC3Q96LT9 517 aaKnown RBP11.29□□□□□ -0.6
MRPS35-204ENST00000542199 SPATA9Q9BWV2 254 aa11.29□□□□□ -0.6
MRPS35-204ENST00000542199 GPATCH2Q9NW75 528 aa11.29□□□□□ -0.6
MRPS35-204ENST00000542199 LRP2BPQ9P2M1 347 aa11.29□□□□□ -0.6
MRPS35-204ENST00000542199 AKT3Q9Y243 479 aa11.29□□□□□ -0.6
MRPS35-204ENST00000542199 ALS2Q96Q42 1657 aa11.29□□□□□ -0.6
MRPS35-204ENST00000542199 ABCA3Q99758 1704 aa11.29□□□□□ -0.6
MRPS35-204ENST00000542199 TMEM265A0A087WTH1 108 aa11.28□□□□□ -0.6
MRPS35-204ENST00000542199 TPP2P29144 1249 aaPredicted RBP11.28□□□□□ -0.6
MRPS35-204ENST00000542199 CD96P40200 585 aa11.28□□□□□ -0.6
MRPS35-204ENST00000542199 TSPYL5Q86VY4 417 aaPredicted RBP11.28□□□□□ -0.6
MRPS35-204ENST00000542199 ZNF669Q96BR6 464 aaPredicted RBP11.28□□□□□ -0.6
MRPS35-204ENST00000542199 TCTN2Q96GX1 697 aa11.28□□□□□ -0.6
MRPS35-204ENST00000542199 RCC1LQ96I51 464 aaKnown RBP11.28□□□□□ -0.6
MRPS35-204ENST00000542199 TRIT1Q9H3H1 467 aaKnown RBP11.28□□□□□ -0.6
MRPS35-204ENST00000542199 ATP13A1Q9HD20 1204 aa11.28□□□□□ -0.6
MRPS35-204ENST00000542199 EMC9Q9Y3B6 208 aa11.28□□□□□ -0.6
MRPS35-204ENST00000542199 CENPJQ9HC77 1338 aaPredicted RBP11.28□□□□□ -0.6
MRPS35-204ENST00000542199 A0A087WZG4 1122 aa11.27□□□□□ -0.61
MRPS35-204ENST00000542199 ADCY3O60266 1144 aa11.27□□□□□ -0.61
MRPS35-204ENST00000542199 MED26O95402 600 aa11.27□□□□□ -0.61
MRPS35-204ENST00000542199 DAGLBQ8NCG7 672 aa11.27□□□□□ -0.61
MRPS35-204ENST00000542199 SH3TC2Q8TF17 1288 aa11.27□□□□□ -0.61
MRPS35-204ENST00000542199 MRGPRX3Q96LB0 322 aa11.27□□□□□ -0.61
MRPS35-204ENST00000542199 SIN3AQ96ST3 1273 aa11.27□□□□□ -0.61
MRPS35-204ENST00000542199 ARHGEF4Q9NR80 690 aa11.27□□□□□ -0.61
MRPS35-204ENST00000542199 NWD2Q9ULI1 1742 aa11.26□□□□□ -0.61
MRPS35-204ENST00000542199 AGRPO00253 132 aa11.26□□□□□ -0.61
MRPS35-204ENST00000542199 VAMP4O75379 141 aa11.26□□□□□ -0.61
MRPS35-204ENST00000542199 KCNH1O95259 989 aa11.26□□□□□ -0.61
MRPS35-204ENST00000542199 FAM153BP0C7A2 387 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms