RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 MAF1Q9H063 256 aa15.4■□□□□ 0.06
SCARB1-207ENST00000541661 TOMM22Q9NS69 142 aa15.4■□□□□ 0.06
SCARB1-207ENST00000541661 MTCH2Q9Y6C9 303 aa15.4■□□□□ 0.06
SCARB1-207ENST00000541661 TCF20Q9UGU0 1960 aaKnown RBP15.4■□□□□ 0.06
SCARB1-207ENST00000541661 B4DLN1 442 aa15.39■□□□□ 0.05
SCARB1-207ENST00000541661 CA3P07451 260 aa15.39■□□□□ 0.05
SCARB1-207ENST00000541661 PCP11498 1178 aaKnown RBP15.39■□□□□ 0.05
SCARB1-207ENST00000541661 MRPL12P52815 198 aaKnown RBP15.39■□□□□ 0.05
SCARB1-207ENST00000541661 AAK1Q2M2I8 961 aa15.39■□□□□ 0.05
SCARB1-207ENST00000541661 MCMDC2Q4G0Z9 681 aa15.39■□□□□ 0.05
SCARB1-207ENST00000541661 FAM47CQ5HY64 1035 aa15.39■□□□□ 0.05
SCARB1-207ENST00000541661 RRP12Q5JTH9 1297 aaKnown RBP15.39■□□□□ 0.05
SCARB1-207ENST00000541661 RETREG2Q8NC44 543 aa15.39■□□□□ 0.05
SCARB1-207ENST00000541661 TXNP10599 105 aaKnown RBP15.38■□□□□ 0.05
SCARB1-207ENST00000541661 HSPD1P10809 573 aaKnown RBP15.38■□□□□ 0.05
SCARB1-207ENST00000541661 PDE1AP54750 535 aa15.38■□□□□ 0.05
SCARB1-207ENST00000541661 BFSP2Q13515 415 aa15.38■□□□□ 0.05
SCARB1-207ENST00000541661 COPS5Q92905 334 aa15.38■□□□□ 0.05
SCARB1-207ENST00000541661 FAM227BQ96M60 508 aa15.38■□□□□ 0.05
SCARB1-207ENST00000541661 TET1Q8NFU7 2136 aa15.38■□□□□ 0.05
SCARB1-207ENST00000541661 TRIP12Q14669 1992 aaPredicted RBP15.38■□□□□ 0.05
SCARB1-207ENST00000541661 PRRC2BQ5JSZ5 2229 aaKnown RBP15.37■□□□□ 0.05
SCARB1-207ENST00000541661 PTPRSQ13332 1948 aa15.37■□□□□ 0.05
SCARB1-207ENST00000541661 A0A0D9SFI3 127 aa15.37■□□□□ 0.05
SCARB1-207ENST00000541661 RFXAPO00287 272 aa15.37■□□□□ 0.05
SCARB1-207ENST00000541661 GTPBP6O43824 516 aaPredicted RBP15.37■□□□□ 0.05
SCARB1-207ENST00000541661 BAIAP3O94812 1187 aa15.37■□□□□ 0.05
SCARB1-207ENST00000541661 TFF2Q03403 129 aa15.37■□□□□ 0.05
SCARB1-207ENST00000541661 TAP1Q03518 808 aa15.37■□□□□ 0.05
SCARB1-207ENST00000541661 GPATCH4Q5T3I0 446 aaKnown RBP15.37■□□□□ 0.05
SCARB1-207ENST00000541661 ANKRD45Q5TZF3 282 aa15.37■□□□□ 0.05
SCARB1-207ENST00000541661 CCDC62Q6P9F0 684 aa15.37■□□□□ 0.05
SCARB1-207ENST00000541661 HERC6Q8IVU3 1022 aa15.37■□□□□ 0.05
SCARB1-207ENST00000541661 MICALL1Q8N3F8 863 aa15.37■□□□□ 0.05
SCARB1-207ENST00000541661 KIAA1217Q5T5P2 1943 aa15.37■□□□□ 0.05
SCARB1-207ENST00000541661 EPOPA6NHQ4 379 aa15.36■□□□□ 0.05
SCARB1-207ENST00000541661 KIF28PB7ZC32 967 aa15.36■□□□□ 0.05
SCARB1-207ENST00000541661 ARIH2O95376 493 aa15.36■□□□□ 0.05
SCARB1-207ENST00000541661 MFSD6Q6ZSS7 791 aa15.36■□□□□ 0.05
SCARB1-207ENST00000541661 SESTD1Q86VW0 696 aa15.36■□□□□ 0.05
SCARB1-207ENST00000541661 CAGE1Q8TC20 777 aa15.36■□□□□ 0.05
SCARB1-207ENST00000541661 PPP1R13LQ8WUF5 828 aa15.36■□□□□ 0.05
SCARB1-207ENST00000541661 FTOQ9C0B1 505 aaKnown RBP eCLIP15.36■□□□□ 0.05
SCARB1-207ENST00000541661 ZBTB47Q9UFB7 747 aaPredicted RBP15.36■□□□□ 0.05
SCARB1-207ENST00000541661 COG5Q9UP83 839 aa15.36■□□□□ 0.05
SCARB1-207ENST00000541661 ARHGEF15O94989 841 aa15.35■□□□□ 0.05
SCARB1-207ENST00000541661 NT5C2P49902 561 aa15.35■□□□□ 0.05
SCARB1-207ENST00000541661 PTGISQ16647 500 aa15.35■□□□□ 0.05
SCARB1-207ENST00000541661 ZNF589Q86UQ0 364 aaPredicted RBP15.35■□□□□ 0.05
SCARB1-207ENST00000541661 DGKHQ86XP1 1220 aa15.35■□□□□ 0.05
SCARB1-207ENST00000541661 CCDC155Q8N6L0 562 aa15.35■□□□□ 0.05
SCARB1-207ENST00000541661 AFAP1L1Q8TED9 768 aa15.35■□□□□ 0.05
SCARB1-207ENST00000541661 NECAB3Q96P71 396 aaPredicted RBP15.35■□□□□ 0.05
SCARB1-207ENST00000541661 CTAGE1Q96RT6 745 aa15.35■□□□□ 0.05
SCARB1-207ENST00000541661 C1QTNF1Q9BXJ1 281 aa15.35■□□□□ 0.05
SCARB1-207ENST00000541661 CERS4Q9HA82 394 aa15.35■□□□□ 0.05
SCARB1-207ENST00000541661 NOD1Q9Y239 953 aa15.35■□□□□ 0.05
SCARB1-207ENST00000541661 KCNQ1P51787 676 aa15.34■□□□□ 0.05
SCARB1-207ENST00000541661 HAND2P61296 217 aa15.34■□□□□ 0.05
SCARB1-207ENST00000541661 RBL2Q08999 1139 aa15.34■□□□□ 0.05
SCARB1-207ENST00000541661 NMIQ13287 307 aaPredicted RBP15.34■□□□□ 0.05
SCARB1-207ENST00000541661 GPNMBQ14956 572 aa15.34■□□□□ 0.05
SCARB1-207ENST00000541661 SKIV2LQ15477 1246 aaKnown RBP15.34■□□□□ 0.05
SCARB1-207ENST00000541661 TBC1D10CQ8IV04 446 aa15.34■□□□□ 0.05
SCARB1-207ENST00000541661 AFG1LQ8WV93 481 aa15.34■□□□□ 0.05
SCARB1-207ENST00000541661 ARNTL2Q8WYA1 636 aa15.34■□□□□ 0.05
SCARB1-207ENST00000541661 IWS1Q96ST2 819 aa15.34■□□□□ 0.05
SCARB1-207ENST00000541661 RNF41Q9H4P4 317 aaPredicted RBP15.34■□□□□ 0.05
SCARB1-207ENST00000541661 RAPGEFL1Q9UHV5 662 aa15.34■□□□□ 0.05
SCARB1-207ENST00000541661 CCDC171Q6TFL3 1326 aa15.34■□□□□ 0.05
SCARB1-207ENST00000541661 PARNO95453 639 aaKnown RBP15.33■□□□□ 0.04
SCARB1-207ENST00000541661 GH1P01241 217 aa15.33■□□□□ 0.04
SCARB1-207ENST00000541661 MMP3P08254 477 aa15.33■□□□□ 0.04
SCARB1-207ENST00000541661 GOLGA8HP0CJ92 632 aa15.33■□□□□ 0.04
SCARB1-207ENST00000541661 CASTP20810 708 aaKnown RBP15.33■□□□□ 0.04
SCARB1-207ENST00000541661 ARHGAP1Q07960 439 aa15.33■□□□□ 0.04
SCARB1-207ENST00000541661 USH1GQ495M9 461 aa15.33■□□□□ 0.04
SCARB1-207ENST00000541661 KRT40Q6A162 431 aa15.33■□□□□ 0.04
SCARB1-207ENST00000541661 GDF6Q6KF10 455 aaPredicted RBP15.33■□□□□ 0.04
SCARB1-207ENST00000541661 SYTL5Q8TDW5 730 aaPredicted RBP15.33■□□□□ 0.04
SCARB1-207ENST00000541661 NSUN6Q8TEA1 469 aaKnown RBP15.33■□□□□ 0.04
SCARB1-207ENST00000541661 TBC1D5Q92609 795 aa15.33■□□□□ 0.04
SCARB1-207ENST00000541661 ANKS1AQ92625 1134 aa15.33■□□□□ 0.04
SCARB1-207ENST00000541661 ESR2Q92731 530 aa15.33■□□□□ 0.04
SCARB1-207ENST00000541661 KAT2BQ92831 832 aa15.33■□□□□ 0.04
SCARB1-207ENST00000541661 TAAR1Q96RJ0 339 aa15.33■□□□□ 0.04
SCARB1-207ENST00000541661 UBA5Q9GZZ9 404 aa15.33■□□□□ 0.04
SCARB1-207ENST00000541661 ABCB11O95342 1321 aa15.33■□□□□ 0.04
SCARB1-207ENST00000541661 LAMA4Q16363 1823 aa15.32■□□□□ 0.04
SCARB1-207ENST00000541661 TLL1O43897 1013 aa15.32■□□□□ 0.04
SCARB1-207ENST00000541661 LPXNO60711 386 aa15.32■□□□□ 0.04
SCARB1-207ENST00000541661 CXCL10P02778 98 aa15.32■□□□□ 0.04
SCARB1-207ENST00000541661 SELPP16109 830 aa15.32■□□□□ 0.04
SCARB1-207ENST00000541661 KCNJ6P48051 423 aa15.32■□□□□ 0.04
SCARB1-207ENST00000541661 MFAP1P55081 439 aaKnown RBP15.32■□□□□ 0.04
SCARB1-207ENST00000541661 WDR5P61964 334 aaKnown RBP15.32■□□□□ 0.04
SCARB1-207ENST00000541661 GRB10Q13322 594 aa15.32■□□□□ 0.04
SCARB1-207ENST00000541661 HDAC1Q13547 482 aaPredicted RBP15.32■□□□□ 0.04
SCARB1-207ENST00000541661 STXBP2Q15833 593 aa15.32■□□□□ 0.04
SCARB1-207ENST00000541661 CDC37Q16543 378 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms