RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 CLEC1BQ9P126 229 aa8.85□□□□□ -0.99
CCDC7-209ENST00000539197 DUSP10Q9Y6W6 482 aa8.85□□□□□ -0.99
CCDC7-209ENST00000539197 NPHP3-ACAD11A0A0J9YXS1 232 aa8.84□□□□□ -0.99
CCDC7-209ENST00000539197 ZBTB7CA1YPR0 619 aa8.84□□□□□ -0.99
CCDC7-209ENST00000539197 EFEMP1Q12805 493 aa8.84□□□□□ -0.99
CCDC7-209ENST00000539197 USP33Q8TEY7 942 aa8.84□□□□□ -0.99
CCDC7-209ENST00000539197 AKT3Q9Y243 479 aa8.84□□□□□ -0.99
CCDC7-209ENST00000539197 KCNH1O95259 989 aa8.83□□□□□ -1
CCDC7-209ENST00000539197 ZBTB7AO95365 584 aa8.83□□□□□ -1
CCDC7-209ENST00000539197 FUCA1P04066 466 aa8.83□□□□□ -1
CCDC7-209ENST00000539197 NTRK1P04629 796 aa8.83□□□□□ -1
CCDC7-209ENST00000539197 GJA8P48165 433 aa8.83□□□□□ -1
CCDC7-209ENST00000539197 VHLLQ6RSH7 139 aa8.83□□□□□ -1
CCDC7-209ENST00000539197 CARFQ8N187 725 aa8.83□□□□□ -1
CCDC7-209ENST00000539197 CPA5Q8WXQ8 436 aa8.83□□□□□ -1
CCDC7-209ENST00000539197 NPHS1O60500 1241 aa8.82□□□□□ -1
CCDC7-209ENST00000539197 PLS3P13797 630 aa8.82□□□□□ -1
CCDC7-209ENST00000539197 WWC2Q6AWC2 1192 aa8.82□□□□□ -1
CCDC7-209ENST00000539197 DDX1Q92499 740 aaKnown RBP8.82□□□□□ -1
CCDC7-209ENST00000539197 DPF3Q92784 378 aa8.82□□□□□ -1
CCDC7-209ENST00000539197 DDX11Q96FC9 970 aa8.82□□□□□ -1
CCDC7-209ENST00000539197 SPATA6Q9NWH7 488 aaPredicted RBP8.82□□□□□ -1
CCDC7-209ENST00000539197 CASP7P55210 303 aa8.81□□□□□ -1
CCDC7-209ENST00000539197 CACNB2Q08289 660 aaPredicted RBP8.81□□□□□ -1
CCDC7-209ENST00000539197 SCRN1Q12765 414 aa8.81□□□□□ -1
CCDC7-209ENST00000539197 SMAD4Q13485 552 aaKnown RBP8.81□□□□□ -1
CCDC7-209ENST00000539197 CPLX3Q8WVH0 158 aa8.81□□□□□ -1
CCDC7-209ENST00000539197 ACBD3Q9H3P7 528 aa8.81□□□□□ -1
CCDC7-209ENST00000539197 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.81□□□□□ -1
CCDC7-209ENST00000539197 CNOT11Q9UKZ1 510 aaKnown RBP8.81□□□□□ -1
CCDC7-209ENST00000539197 EMC9Q9Y3B6 208 aa8.81□□□□□ -1
CCDC7-209ENST00000539197 ANKRD34BA5PLL1 514 aa8.8□□□□□ -1
CCDC7-209ENST00000539197 GJA9P57773 515 aa8.8□□□□□ -1
CCDC7-209ENST00000539197 CYP4F3Q08477 520 aa8.8□□□□□ -1
CCDC7-209ENST00000539197 INF2Q27J81 1249 aa8.8□□□□□ -1
CCDC7-209ENST00000539197 PLEKHO2Q8TD55 490 aa8.8□□□□□ -1
CCDC7-209ENST00000539197 COPS5Q92905 334 aa8.8□□□□□ -1
CCDC7-209ENST00000539197 MRRFQ96E11 262 aaKnown RBP8.8□□□□□ -1
CCDC7-209ENST00000539197 MARCH2Q9P0N8 246 aa8.8□□□□□ -1
CCDC7-209ENST00000539197 NTMQ9P121 344 aa8.8□□□□□ -1
CCDC7-209ENST00000539197 K7ESM1 405 aa8.79□□□□□ -1
CCDC7-209ENST00000539197 NOBOXO60393 691 aa8.79□□□□□ -1
CCDC7-209ENST00000539197 C8BP07358 591 aa8.79□□□□□ -1
CCDC7-209ENST00000539197 SARSP49591 514 aaKnown RBP8.79□□□□□ -1
CCDC7-209ENST00000539197 TEX2Q8IWB9 1127 aa8.79□□□□□ -1
CCDC7-209ENST00000539197 ZBTB8AQ96BR9 441 aa8.79□□□□□ -1
CCDC7-209ENST00000539197 ANAPC16Q96DE5 110 aa8.79□□□□□ -1
CCDC7-209ENST00000539197 BTG4Q9NY30 223 aa8.79□□□□□ -1
CCDC7-209ENST00000539197 KIAA1522Q9P206 1035 aaPredicted RBP8.79□□□□□ -1
CCDC7-209ENST00000539197 THBDP07204 575 aa8.78□□□□□ -1
CCDC7-209ENST00000539197 TTLL7Q6ZT98 887 aa8.78□□□□□ -1
CCDC7-209ENST00000539197 CRACR2BQ8N4Y2 399 aaPredicted RBP8.78□□□□□ -1
CCDC7-209ENST00000539197 FAM26EQ8N5C1 309 aa8.78□□□□□ -1
CCDC7-209ENST00000539197 TBX1O43435 398 aa8.77□□□□□ -1.01
CCDC7-209ENST00000539197 CNR2P34972 360 aa8.77□□□□□ -1.01
CCDC7-209ENST00000539197 GTF2IRD2BQ6EKJ0 949 aa8.77□□□□□ -1.01
CCDC7-209ENST00000539197 POMZP3Q6PJE2 187 aa8.77□□□□□ -1.01
CCDC7-209ENST00000539197 GTF2IRD2Q86UP8 949 aa8.77□□□□□ -1.01
CCDC7-209ENST00000539197 STK32CQ86UX6 486 aa8.77□□□□□ -1.01
CCDC7-209ENST00000539197 BVESQ8NE79 360 aa8.77□□□□□ -1.01
CCDC7-209ENST00000539197 APBA2Q99767 749 aa8.77□□□□□ -1.01
CCDC7-209ENST00000539197 GORASP1Q9BQQ3 440 aa8.77□□□□□ -1.01
CCDC7-209ENST00000539197 UNCXA6NJT0 531 aa8.76□□□□□ -1.01
CCDC7-209ENST00000539197 ARNTLO00327 626 aa8.76□□□□□ -1.01
CCDC7-209ENST00000539197 SGSM2O43147 1006 aa8.76□□□□□ -1.01
CCDC7-209ENST00000539197 SMARCA5O60264 1052 aaPredicted RBP8.76□□□□□ -1.01
CCDC7-209ENST00000539197 CYP2C8P10632 490 aa8.76□□□□□ -1.01
CCDC7-209ENST00000539197 ZXDCQ2QGD7 858 aaPredicted RBP8.76□□□□□ -1.01
CCDC7-209ENST00000539197 HHIPL2Q6UWX4 724 aa8.76□□□□□ -1.01
CCDC7-209ENST00000539197 ZNF761Q86XN6 746 aaPredicted RBP8.76□□□□□ -1.01
CCDC7-209ENST00000539197 DCP2Q8IU60 420 aaKnown RBP8.76□□□□□ -1.01
CCDC7-209ENST00000539197 PPP1R14AQ96A00 147 aa8.76□□□□□ -1.01
CCDC7-209ENST00000539197 MMP19Q99542 508 aa8.76□□□□□ -1.01
CCDC7-209ENST00000539197 LNPKQ9C0E8 428 aa8.76□□□□□ -1.01
CCDC7-209ENST00000539197 NAT2P11245 290 aa8.75□□□□□ -1.01
CCDC7-209ENST00000539197 ZNF827Q17R98 1081 aa8.75□□□□□ -1.01
CCDC7-209ENST00000539197 FRS2Q8WU20 508 aa8.75□□□□□ -1.01
CCDC7-209ENST00000539197 MRGPRX3Q96LB0 322 aa8.75□□□□□ -1.01
CCDC7-209ENST00000539197 AP5M1Q9H0R1 490 aa8.75□□□□□ -1.01
CCDC7-209ENST00000539197 PCDH18Q9HCL0 1135 aa8.75□□□□□ -1.01
CCDC7-209ENST00000539197 TMEFF2Q9UIK5 374 aaPredicted RBP8.75□□□□□ -1.01
CCDC7-209ENST00000539197 PALD1Q9ULE6 856 aa8.75□□□□□ -1.01
CCDC7-209ENST00000539197 NOP56O00567 594 aaKnown RBP8.74□□□□□ -1.01
CCDC7-209ENST00000539197 FPR2P25090 351 aa8.74□□□□□ -1.01
CCDC7-209ENST00000539197 TRIM59Q8IWR1 403 aa8.74□□□□□ -1.01
CCDC7-209ENST00000539197 LINC00482Q8N8I6 264 aa8.74□□□□□ -1.01
CCDC7-209ENST00000539197 SEC16BQ96JE7 1060 aa8.74□□□□□ -1.01
CCDC7-209ENST00000539197 GPR20Q99678 358 aa8.74□□□□□ -1.01
CCDC7-209ENST00000539197 C22orf46C9J442 243 aa8.73□□□□□ -1.01
CCDC7-209ENST00000539197 ZNF143P52747 638 aaPredicted RBP8.73□□□□□ -1.01
CCDC7-209ENST00000539197 ETV3LQ6ZN32 361 aa8.73□□□□□ -1.01
CCDC7-209ENST00000539197 CCDC103Q8IW40 242 aa8.73□□□□□ -1.01
CCDC7-209ENST00000539197 NPLOC4Q8TAT6 608 aa8.73□□□□□ -1.01
CCDC7-209ENST00000539197 BTN2A2Q8WVV5 523 aa8.73□□□□□ -1.01
CCDC7-209ENST00000539197 INPP5FQ9Y2H2 1132 aa8.73□□□□□ -1.01
CCDC7-209ENST00000539197 MRVI1Q9Y6F6 885 aa8.73□□□□□ -1.01
CCDC7-209ENST00000539197 B2RBV5 119 aa8.72□□□□□ -1.01
CCDC7-209ENST00000539197 ADAMTS17Q8TE56 1095 aa8.72□□□□□ -1.01
CCDC7-209ENST00000539197 C11orf84Q9BUA3 381 aaPredicted RBP8.72□□□□□ -1.01
CCDC7-209ENST00000539197 NKX2-4Q9H2Z4 354 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms