RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 LOC102724159A0A0B4J2E5 919 aa16.5■□□□□ 0.23
SMARCA4-206ENST00000538456 KIF28PB7ZC32 967 aa16.5■□□□□ 0.23
SMARCA4-206ENST00000538456 ORC4O43929 436 aa16.5■□□□□ 0.23
SMARCA4-206ENST00000538456 TOP1P11387 765 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-206ENST00000538456 POU3F3P20264 500 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-206ENST00000538456 NOVP48745 357 aa16.5■□□□□ 0.23
SMARCA4-206ENST00000538456 RPS6P62753 249 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-206ENST00000538456 PWP2Q15269 919 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-206ENST00000538456 BTNL9Q6UXG8 535 aa16.5■□□□□ 0.23
SMARCA4-206ENST00000538456 PHOSPHO2Q8TCD6 241 aa16.5■□□□□ 0.23
SMARCA4-206ENST00000538456 SCFD2Q8WU76 684 aa16.5■□□□□ 0.23
SMARCA4-206ENST00000538456 TMEM47Q9BQJ4 181 aa16.5■□□□□ 0.23
SMARCA4-206ENST00000538456 A6NJR5 290 aa16.49■□□□□ 0.23
SMARCA4-206ENST00000538456 NKRFO15226 690 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMARCA4-206ENST00000538456 TLL1O43897 1013 aa16.49■□□□□ 0.23
SMARCA4-206ENST00000538456 TXNP10599 105 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-206ENST00000538456 MX1P20591 662 aa16.49■□□□□ 0.23
SMARCA4-206ENST00000538456 KCNJ6P48051 423 aa16.49■□□□□ 0.23
SMARCA4-206ENST00000538456 GRB10Q13322 594 aa16.49■□□□□ 0.23
SMARCA4-206ENST00000538456 BFSP2Q13515 415 aa16.49■□□□□ 0.23
SMARCA4-206ENST00000538456 TMCO2Q7Z6W1 182 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-206ENST00000538456 MPHOSPH6Q99547 160 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-206ENST00000538456 EPHX3Q9H6B9 360 aa16.49■□□□□ 0.23
SMARCA4-206ENST00000538456 ANAPC4Q9UJX5 808 aa16.49■□□□□ 0.23
SMARCA4-206ENST00000538456 COG5Q9UP83 839 aa16.49■□□□□ 0.23
SMARCA4-206ENST00000538456 KPNA6O60684 536 aa16.48■□□□□ 0.23
SMARCA4-206ENST00000538456 ARIH2O95376 493 aa16.48■□□□□ 0.23
SMARCA4-206ENST00000538456 PDHBP11177 359 aa16.48■□□□□ 0.23
SMARCA4-206ENST00000538456 EDNRBP24530 442 aa16.48■□□□□ 0.23
SMARCA4-206ENST00000538456 PTGISQ16647 500 aa16.48■□□□□ 0.23
SMARCA4-206ENST00000538456 USH1GQ495M9 461 aa16.48■□□□□ 0.23
SMARCA4-206ENST00000538456 DIEXFQ68CQ4 756 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-206ENST00000538456 HLA-CQ95604 372 aa16.48■□□□□ 0.23
SMARCA4-206ENST00000538456 LCHNA4D1U4 455 aa16.47■□□□□ 0.23
SMARCA4-206ENST00000538456 BAIAP3O94812 1187 aa16.47■□□□□ 0.23
SMARCA4-206ENST00000538456 PTPN11Q06124 597 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-206ENST00000538456 DNERQ8NFT8 737 aa16.47■□□□□ 0.23
SMARCA4-206ENST00000538456 GDPD5Q8WTR4 605 aa16.47■□□□□ 0.23
SMARCA4-206ENST00000538456 LRFN3Q9BTN0 628 aa16.47■□□□□ 0.23
SMARCA4-206ENST00000538456 MTUS1Q9ULD2 1270 aa16.47■□□□□ 0.23
SMARCA4-206ENST00000538456 KIAA1217Q5T5P2 1943 aa16.47■□□□□ 0.23
SMARCA4-206ENST00000538456 RBAK-RBAKDNI3L0D1 243 aa16.46■□□□□ 0.23
SMARCA4-206ENST00000538456 LPXNO60711 386 aa16.46■□□□□ 0.23
SMARCA4-206ENST00000538456 FGRP09769 529 aa16.46■□□□□ 0.23
SMARCA4-206ENST00000538456 WDR5P61964 334 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-206ENST00000538456 ZNF543Q08ER8 600 aa16.46■□□□□ 0.23
SMARCA4-206ENST00000538456 GDF6Q6KF10 455 aaPredicted RBP16.46■□□□□ 0.23
SMARCA4-206ENST00000538456 CCDC155Q8N6L0 562 aa16.46■□□□□ 0.23
SMARCA4-206ENST00000538456 AFG1LQ8WV93 481 aa16.46■□□□□ 0.23
SMARCA4-206ENST00000538456 ZBED2Q9BTP6 218 aa16.46■□□□□ 0.23
SMARCA4-206ENST00000538456 HCN4Q9Y3Q4 1203 aa16.46■□□□□ 0.23
SMARCA4-206ENST00000538456 WDR19Q8NEZ3 1342 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 MYH6P13533 1939 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 B4DLN1 442 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 MMP3P08254 477 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 GOLGA8HP0CJ92 632 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 MRPL12P52815 198 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 HAND2P61296 217 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 DEFB103AP81534 67 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 LRRC8DQ7L1W4 858 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 CHST3Q7LGC8 479 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 CAGE1Q8TC20 777 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 AFAP1L1Q8TED9 768 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 KHSRPQ92945 711 aaKnown RBP eCLIP16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 FAM227BQ96M60 508 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 CTAGE1Q96RT6 745 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 CPVLQ9H3G5 476 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 PNMA2Q9UL42 364 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 PCDHB15Q9Y5E8 787 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 SIP14410 1827 aa16.45■□□□□ 0.22
SMARCA4-206ENST00000538456 FAM86C2PA6NEL3 165 aa16.44■□□□□ 0.22
SMARCA4-206ENST00000538456 FGAP02671 866 aa16.44■□□□□ 0.22
SMARCA4-206ENST00000538456 SELPP16109 830 aa16.44■□□□□ 0.22
SMARCA4-206ENST00000538456 ALX1Q15699 326 aa16.44■□□□□ 0.22
SMARCA4-206ENST00000538456 LY6KQ17RY6 165 aa16.44■□□□□ 0.22
SMARCA4-206ENST00000538456 TMEM31Q5JXX7 168 aa16.44■□□□□ 0.22
SMARCA4-206ENST00000538456 SEPT14Q6ZU15 432 aa16.44■□□□□ 0.22
SMARCA4-206ENST00000538456 DHX38Q92620 1227 aaKnown RBP16.44■□□□□ 0.22
SMARCA4-206ENST00000538456 TCP11L1Q9NUJ3 509 aa16.44■□□□□ 0.22
SMARCA4-206ENST00000538456 A0A0D9SFI3 127 aa16.43■□□□□ 0.22
SMARCA4-206ENST00000538456 GH1P01241 217 aa16.43■□□□□ 0.22
SMARCA4-206ENST00000538456 ARHGAP1Q07960 439 aa16.43■□□□□ 0.22
SMARCA4-206ENST00000538456 GPNMBQ14956 572 aa16.43■□□□□ 0.22
SMARCA4-206ENST00000538456 CCDC62Q6P9F0 684 aa16.43■□□□□ 0.22
SMARCA4-206ENST00000538456 EVI5LQ96CN4 794 aa16.43■□□□□ 0.22
SMARCA4-206ENST00000538456 HELLSQ9NRZ9 838 aa16.43■□□□□ 0.22
SMARCA4-206ENST00000538456 MYH7BA7E2Y1 1941 aa16.43■□□□□ 0.22
SMARCA4-206ENST00000538456 SALL3Q9BXA9 1300 aa16.43■□□□□ 0.22
SMARCA4-206ENST00000538456 NBNO60934 754 aa16.42■□□□□ 0.22
SMARCA4-206ENST00000538456 SNHG28P0DPA3 235 aa16.42■□□□□ 0.22
SMARCA4-206ENST00000538456 HOXD11P31277 338 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-206ENST00000538456 TCTN1Q2MV58 587 aa16.42■□□□□ 0.22
SMARCA4-206ENST00000538456 FAM117BQ6P1L5 589 aa16.42■□□□□ 0.22
SMARCA4-206ENST00000538456 CNKSR3Q6P9H4 555 aa16.42■□□□□ 0.22
SMARCA4-206ENST00000538456 TBC1D10CQ8IV04 446 aa16.42■□□□□ 0.22
SMARCA4-206ENST00000538456 TBC1D5Q92609 795 aa16.42■□□□□ 0.22
SMARCA4-206ENST00000538456 KAT2BQ92831 832 aa16.42■□□□□ 0.22
SMARCA4-206ENST00000538456 ZKSCAN3Q9BRR0 538 aa16.42■□□□□ 0.22
SMARCA4-206ENST00000538456 UBA5Q9GZZ9 404 aa16.42■□□□□ 0.22
SMARCA4-206ENST00000538456 ZNF286BP0CG31 522 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms