RNA–Protein interactions for RNA: ENST00000533318.5

SNX19-212, Transcript of sorting nexin 19, humanhuman

TSL 2

Gene SNX19, Length 1,565 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-212ENST00000533318 SLFN12Q8IYM2 578 aa21.23■□□□□ 0.99
SNX19-212ENST00000533318 ZKSCAN4Q969J2 545 aaPredicted RBP21.23■□□□□ 0.99
SNX19-212ENST00000533318 MRFAP1L1Q96HT8 127 aa21.23■□□□□ 0.99
SNX19-212ENST00000533318 TTC12Q9H892 705 aaPredicted RBP21.23■□□□□ 0.99
SNX19-212ENST00000533318 GOLGA6L6A8MZA4 724 aa21.23■□□□□ 0.99
SNX19-212ENST00000533318 C19orf81C9J6K1 198 aa21.23■□□□□ 0.99
SNX19-212ENST00000533318 MARCH6O60337 910 aa21.23■□□□□ 0.99
SNX19-212ENST00000533318 ERCC5P28715 1186 aaPredicted RBP21.23■□□□□ 0.99
SNX19-212ENST00000533318 DCPSQ96C86 337 aaKnown RBP21.23■□□□□ 0.99
SNX19-212ENST00000533318 L3MBTL3Q96JM7 780 aaPredicted RBP21.23■□□□□ 0.99
SNX19-212ENST00000533318 TANGO6Q9C0B7 1094 aa21.23■□□□□ 0.99
SNX19-212ENST00000533318 STK17AQ9UEE5 414 aa21.23■□□□□ 0.99
SNX19-212ENST00000533318 PPP1R9AQ9ULJ8 1098 aa21.23■□□□□ 0.99
SNX19-212ENST00000533318 ZNF536O15090 1300 aa21.22■□□□□ 0.99
SNX19-212ENST00000533318 POLR2AP24928 1970 aaKnown RBP21.22■□□□□ 0.99
SNX19-212ENST00000533318 ESPNB1AK53 854 aa21.22■□□□□ 0.99
SNX19-212ENST00000533318 CFBP00751 764 aa21.22■□□□□ 0.99
SNX19-212ENST00000533318 TPM3P06753 285 aa21.22■□□□□ 0.99
SNX19-212ENST00000533318 HOXA13P31271 388 aaPredicted RBP21.22■□□□□ 0.99
SNX19-212ENST00000533318 KRT79Q5XKE5 535 aa21.22■□□□□ 0.99
SNX19-212ENST00000533318 DPY19L2Q6NUT2 758 aa21.22■□□□□ 0.99
SNX19-212ENST00000533318 ZSCAN30Q86W11 494 aa21.22■□□□□ 0.99
SNX19-212ENST00000533318 FAM43AQ8N2R8 423 aa21.22■□□□□ 0.99
SNX19-212ENST00000533318 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.22■□□□□ 0.99
SNX19-212ENST00000533318 RPAP3Q9H6T3 665 aaPredicted RBP21.22■□□□□ 0.99
SNX19-212ENST00000533318 SLC38A10Q9HBR0 1119 aa21.22■□□□□ 0.99
SNX19-212ENST00000533318 CCPG1Q9ULG6 757 aa21.22■□□□□ 0.99
SNX19-212ENST00000533318 PCDHA12Q9UN75 941 aa21.22■□□□□ 0.99
SNX19-212ENST00000533318 SMCHD1A6NHR9 2005 aa21.21■□□□□ 0.99
SNX19-212ENST00000533318 ZC3H4Q9UPT8 1303 aaKnown RBP21.21■□□□□ 0.99
SNX19-212ENST00000533318 RPN1P04843 607 aaKnown RBP21.21■□□□□ 0.99
SNX19-212ENST00000533318 CASP1P29466 404 aa21.21■□□□□ 0.99
SNX19-212ENST00000533318 GHRHRQ02643 423 aa21.21■□□□□ 0.99
SNX19-212ENST00000533318 CUL4BQ13620 913 aa21.21■□□□□ 0.99
SNX19-212ENST00000533318 SAMD3Q8N6K7 520 aa21.21■□□□□ 0.99
SNX19-212ENST00000533318 ENOX1Q8TC92 643 aaKnown RBP21.21■□□□□ 0.99
SNX19-212ENST00000533318 STAMQ92783 540 aa21.21■□□□□ 0.99
SNX19-212ENST00000533318 BLZF1Q9H2G9 400 aa21.21■□□□□ 0.99
SNX19-212ENST00000533318 PARP14Q460N5 1801 aa21.21■□□□□ 0.99
SNX19-212ENST00000533318 FLOT1O75955 427 aa21.2■□□□□ 0.98
SNX19-212ENST00000533318 GRB10Q13322 594 aa21.2■□□□□ 0.98
SNX19-212ENST00000533318 KCNB1Q14721 858 aa21.2■□□□□ 0.98
SNX19-212ENST00000533318 SAMD1Q6SPF0 538 aaPredicted RBP21.2■□□□□ 0.98
SNX19-212ENST00000533318 SULF1Q8IWU6 871 aa21.2■□□□□ 0.98
SNX19-212ENST00000533318 ETNPPLQ8TBG4 499 aa21.2■□□□□ 0.98
SNX19-212ENST00000533318 CDK5RAP3Q96JB5 506 aa21.2■□□□□ 0.98
SNX19-212ENST00000533318 POTEMA6NI47 508 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 HSD17B4P51659 736 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 AMPD3Q01432 767 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 TMEM119Q4V9L6 283 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 MCF2L2Q86YR7 1114 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 SNX29Q8TEQ0 813 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 LRRC15Q8TF66 581 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 FAM20AQ96MK3 541 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 RABGAP1Q9Y3P9 1069 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 ZHX2Q9Y6X8 837 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 PAPPA2Q9BXP8 1791 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 KDM3AQ9Y4C1 1321 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 ZBED4O75132 1171 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 USP2O75604 605 aaPredicted RBP21.19■□□□□ 0.98
SNX19-212ENST00000533318 PRR16Q569H4 304 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 HYIQ5T013 277 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 USP50Q70EL3 339 aaPredicted RBP21.19■□□□□ 0.98
SNX19-212ENST00000533318 FCHSD1Q86WN1 690 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 LENG9Q96B70 501 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 AGBL1Q96MI9 1066 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 PNMA5Q96PV4 448 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 PLIN2Q99541 437 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 GTPBP4Q9BZE4 634 aaKnown RBP21.19■□□□□ 0.98
SNX19-212ENST00000533318 HSD3B7Q9H2F3 369 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 MAP3K20Q9NYL2 800 aaKnown RBP21.19■□□□□ 0.98
SNX19-212ENST00000533318 STK24Q9Y6E0 443 aa21.19■□□□□ 0.98
SNX19-212ENST00000533318 RBBP6Q7Z6E9 1792 aaKnown RBP21.18■□□□□ 0.98
SNX19-212ENST00000533318 DGKZQ13574 1117 aa21.18■□□□□ 0.98
SNX19-212ENST00000533318 ZNF658Q5TYW1 1059 aaPredicted RBP21.18■□□□□ 0.98
SNX19-212ENST00000533318 TBC1D5Q92609 795 aa21.18■□□□□ 0.98
SNX19-212ENST00000533318 C7orf25Q9BPX7 421 aa21.18■□□□□ 0.98
SNX19-212ENST00000533318 FZD1Q9UP38 647 aa21.18■□□□□ 0.98
SNX19-212ENST00000533318 ZKSCAN5Q9Y2L8 839 aa21.18■□□□□ 0.98
SNX19-212ENST00000533318 CTDP1Q9Y5B0 961 aaPredicted RBP21.18■□□□□ 0.98
SNX19-212ENST00000533318 FAM86B1E9PN63 330 aa21.17■□□□□ 0.98
SNX19-212ENST00000533318 FAM86B2P0C5J1 330 aa21.17■□□□□ 0.98
SNX19-212ENST00000533318 ZNF76P36508 570 aa21.17■□□□□ 0.98
SNX19-212ENST00000533318 MAP3K9P80192 1104 aa21.17■□□□□ 0.98
SNX19-212ENST00000533318 ZC3H15Q8WU90 426 aaKnown RBP21.17■□□□□ 0.98
SNX19-212ENST00000533318 LRRC27Q9C0I9 530 aa21.17■□□□□ 0.98
SNX19-212ENST00000533318 NT5C3AQ9H0P0 336 aa21.17■□□□□ 0.98
SNX19-212ENST00000533318 PPP1R3GB7ZBB8 358 aa21.16■□□□□ 0.98
SNX19-212ENST00000533318 HMGCS2P54868 508 aa21.16■□□□□ 0.98
SNX19-212ENST00000533318 FMR1Q06787 632 aaKnown RBP eCLIP21.16■□□□□ 0.98
SNX19-212ENST00000533318 SH3D19Q5HYK7 790 aa21.16■□□□□ 0.98
SNX19-212ENST00000533318 SV2BQ7L1I2 683 aa21.16■□□□□ 0.98
SNX19-212ENST00000533318 DRC7Q8IY82 874 aa21.16■□□□□ 0.98
SNX19-212ENST00000533318 RBM46Q8TBY0 533 aaKnown RBP21.16■□□□□ 0.98
SNX19-212ENST00000533318 CLEC4DQ8WXI8 215 aa21.16■□□□□ 0.98
SNX19-212ENST00000533318 CCDC47Q96A33 483 aaKnown RBP21.16■□□□□ 0.98
SNX19-212ENST00000533318 TRIM9Q9C026 710 aa21.16■□□□□ 0.98
SNX19-212ENST00000533318 BLOC1S4Q9NUP1 217 aa21.16■□□□□ 0.98
SNX19-212ENST00000533318 TMOD4Q9NZQ9 345 aa21.16■□□□□ 0.98
SNX19-212ENST00000533318 AFG3L2Q9Y4W6 797 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms