RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 THBDP07204 575 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 PLS3P13797 630 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 ETFBP38117 255 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 ZNF827Q17R98 1081 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 ZFYVE27Q5T4F4 411 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 GTF2IRD2BQ6EKJ0 949 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 GTF2IRD2Q86UP8 949 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 CABP7Q86V35 215 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 TP53I13Q8NBR0 393 aaPredicted RBP5.46□□□□□ -1.54
ATM-217ENST00000531957 MICAL1Q8TDZ2 1067 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 USP33Q8TEY7 942 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 ALG3Q92685 438 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 MTA3Q9BTC8 594 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 USP40Q9NVE5 1235 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 BTG4Q9NY30 223 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 ACTR10Q9NZ32 417 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 MYRFQ9Y2G1 1151 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 SIT1Q9Y3P8 196 aa5.46□□□□□ -1.54
ATM-217ENST00000531957 NOP56O00567 594 aaKnown RBP5.45□□□□□ -1.54
ATM-217ENST00000531957 PLA2G1BP04054 148 aaKnown RBP5.45□□□□□ -1.54
ATM-217ENST00000531957 FUCA1P04066 466 aa5.45□□□□□ -1.54
ATM-217ENST00000531957 ASGR2P07307 311 aa5.45□□□□□ -1.54
ATM-217ENST00000531957 TCF3P15923 654 aa5.45□□□□□ -1.54
ATM-217ENST00000531957 PMLP29590 882 aa5.45□□□□□ -1.54
ATM-217ENST00000531957 RTP5Q14D33 572 aa5.45□□□□□ -1.54
ATM-217ENST00000531957 NCAPHQ15003 741 aa5.45□□□□□ -1.54
ATM-217ENST00000531957 TRIM59Q8IWR1 403 aa5.45□□□□□ -1.54
ATM-217ENST00000531957 ADGRG2Q8IZP9 1017 aa5.45□□□□□ -1.54
ATM-217ENST00000531957 BTN2A2Q8WVV5 523 aa5.45□□□□□ -1.54
ATM-217ENST00000531957 COPS5Q92905 334 aa5.45□□□□□ -1.54
ATM-217ENST00000531957 CCDC9Q9Y3X0 531 aaKnown RBP5.45□□□□□ -1.54
ATM-217ENST00000531957 A0A1B0GTL3 188 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 FFAR3O14843 346 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 NTRK1P04629 796 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 SLURP1P55000 103 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 FOXO4P98177 505 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 CYP4F3Q08477 520 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 INF2Q27J81 1249 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 SV2CQ496J9 727 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 UBXN11Q5T124 520 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 WWC2Q6AWC2 1192 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 POMZP3Q6PJE2 187 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 FAM178BQ8IXR5 827 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 DPF3Q92784 378 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 MRGPRX3Q96LB0 322 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 GPR20Q99678 358 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.44□□□□□ -1.544e-9■□□□□ 10
ATM-217ENST00000531957 MARCH2Q9P0N8 246 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 FAN1Q9Y2M0 1017 aa5.44□□□□□ -1.54
ATM-217ENST00000531957 TRBV23OR9-2A0A075B6M9 112 aa5.43□□□□□ -1.54
ATM-217ENST00000531957 NPHS1O60500 1241 aa5.43□□□□□ -1.54
ATM-217ENST00000531957 DDAH1O94760 285 aa5.43□□□□□ -1.54
ATM-217ENST00000531957 NAT2P11245 290 aa5.43□□□□□ -1.54
ATM-217ENST00000531957 NCAM1P13591 858 aa5.43□□□□□ -1.54
ATM-217ENST00000531957 ZNF143P52747 638 aaPredicted RBP5.43□□□□□ -1.54
ATM-217ENST00000531957 MRM1Q6IN84 353 aaKnown RBP5.43□□□□□ -1.54
ATM-217ENST00000531957 VPS37DQ86XT2 251 aa5.43□□□□□ -1.54
ATM-217ENST00000531957 TEX2Q8IWB9 1127 aa5.43□□□□□ -1.54
ATM-217ENST00000531957 CRACR2BQ8N4Y2 399 aaPredicted RBP5.43□□□□□ -1.54
ATM-217ENST00000531957 NETO2Q8NC67 525 aa5.43□□□□□ -1.54
ATM-217ENST00000531957 FRS2Q8WU20 508 aa5.43□□□□□ -1.54
ATM-217ENST00000531957 RNF38Q9H0F5 515 aa5.43□□□□□ -1.54
ATM-217ENST00000531957 NKX2-4Q9H2Z4 354 aa5.43□□□□□ -1.54
ATM-217ENST00000531957 ZNF408Q9H9D4 720 aa5.43□□□□□ -1.54
ATM-217ENST00000531957 TMEFF2Q9UIK5 374 aaPredicted RBP5.43□□□□□ -1.54
ATM-217ENST00000531957 SUSD5O60279 629 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 ITGAVP06756 1048 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 FPR2P25090 351 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 ECI1P42126 302 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 PUM1Q14671 1186 aaKnown RBP eCLIP5.42□□□□□ -1.54
ATM-217ENST00000531957 SF1Q15637 639 aaKnown RBP5.42□□□□□ -1.54
ATM-217ENST00000531957 PRSS53Q2L4Q9 553 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 VWA3BQ502W6 1294 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 TNNI3KQ59H18 835 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 HHIPL2Q6UWX4 724 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 LIPIQ6XZB0 460 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 ZNF227Q86WZ6 799 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 CCDC103Q8IW40 242 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 NPLOC4Q8TAT6 608 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 PLEKHO2Q8TD55 490 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 FNIP1Q8TF40 1166 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 ZNF526Q8TF50 670 aaPredicted RBP5.42□□□□□ -1.54
ATM-217ENST00000531957 TSPAN17Q96FV3 270 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 PEX11GQ96HA9 241 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 MMP19Q99542 508 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 TINF2Q9BSI4 451 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 CYP26B1Q9NR63 512 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.42□□□□□ -1.54
ATM-217ENST00000531957 LRP2BPQ9P2M1 347 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 PRKAG3Q9UGI9 489 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 NUDT5Q9UKK9 219 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 PMF1-BGLAPU3KQ54 211 aa5.42□□□□□ -1.54
ATM-217ENST00000531957 ARNTLO00327 626 aa5.41□□□□□ -1.54
ATM-217ENST00000531957 PRICKLE3O43900 615 aaPredicted RBP5.41□□□□□ -1.54
ATM-217ENST00000531957 SNRPB2P08579 225 aaKnown RBP5.41□□□□□ -1.54
ATM-217ENST00000531957 FGRP09769 529 aa5.41□□□□□ -1.54
ATM-217ENST00000531957 INSRRP14616 1297 aa5.41□□□□□ -1.54
ATM-217ENST00000531957 DNAJA1P31689 397 aaKnown RBP5.41□□□□□ -1.54
ATM-217ENST00000531957 RBM25P49756 843 aaKnown RBP5.41□□□□□ -1.54
ATM-217ENST00000531957 GNL2Q13823 731 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms