RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 USP31Q70CQ4 1352 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 PLEKHG3A1L390 1219 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 DCDC2CA8MYV0 355 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 ASAP2O43150 1006 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 PFDN1O60925 122 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 SPATA31D3P0C874 917 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 PEX5P50542 639 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 ZNF844Q08AG5 666 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 PTPAQ15257 358 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 PKN1Q16512 942 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 INF2Q27J81 1249 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 KBTBD12Q3ZCT8 623 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 GALNTL6Q49A17 601 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 BEND3Q5T5X7 828 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 ERMARDQ5T6L9 678 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 SPATA1Q5VX52 437 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 C8orf74Q6P047 294 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 SPATA31D4Q6ZUB0 917 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 CACNA2D4Q7Z3S7 1137 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 SLF2Q8IX21 1173 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 ANKS4BQ8N8V4 417 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 OR2W6PQ8NHA6 318 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 DYDC1Q8WWB3 177 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 DHRS1Q96LJ7 313 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 XPO6Q96QU8 1125 aaKnown RBP8.56□□□□□ -1.04
PTPRK-219ENST00000531050 NUP88Q99567 741 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-219ENST00000531050 OXCT2Q9BYC2 517 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-219ENST00000531050 FAM129AQ9BZQ8 928 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 VCXQ9H320 206 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 PCDH18Q9HCL0 1135 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 GJB4Q9NTQ9 266 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 RBM12Q9NTZ6 932 aaKnown RBP8.56□□□□□ -1.04
PTPRK-219ENST00000531050 CWC25Q9NXE8 425 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-219ENST00000531050 DUSP10Q9Y6W6 482 aa8.56□□□□□ -1.04
PTPRK-219ENST00000531050 PPP6R2O75170 966 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 GNA14O95837 355 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 CYP21A2P08686 494 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 GSTA2P09210 222 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 LTKP29376 864 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 PDIA3P30101 505 aaKnown RBP8.55□□□□□ -1.04
PTPRK-219ENST00000531050 ATP11AP98196 1134 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 KIF23Q02241 960 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-219ENST00000531050 SF3A3Q12874 501 aaKnown RBP eCLIP8.55□□□□□ -1.041e-6■■■■□ 21.5
PTPRK-219ENST00000531050 BIRC3Q13489 604 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 POSTNQ15063 836 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 SLC4A8Q2Y0W8 1093 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 SULT6B1Q6IMI4 303 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 IRGCQ6NXR0 463 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 OLFML1Q6UWY5 402 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 PI16Q6UXB8 463 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 RUFY4Q6ZNE9 571 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 NCCRP1Q6ZVX7 275 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-219ENST00000531050 SLC15A3Q8IY34 581 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 SMC1BQ8NDV3 1235 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 IFT81Q8WYA0 676 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 LZICQ8WZA0 190 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 PTPRN2Q92932 1015 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 NACA2Q9H009 215 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 RFX7Q2KHR2 1363 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 GOLGA6L10A0A0M3HER8 536 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 E7ENQ6 273 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 HIP1RO75146 1068 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 ALOX15P16050 662 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-219ENST00000531050 LACTBP83111 547 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-219ENST00000531050 MCL1Q07820 350 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 UAP1Q16222 522 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-219ENST00000531050 TSNAXIP1Q2TAA8 658 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 ASRGL1Q7L266 308 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 ANKRD24Q8TF21 1146 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 CASKIN2Q8WXE0 1202 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 CTAGE1Q96RT6 745 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.55□□□□□ -1.044e-7■□□□□ 9
PTPRK-219ENST00000531050 AGXT2Q9BYV1 514 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 EPB41L5Q9HCM4 733 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 NLRP2Q9NX02 1062 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 HSFX1Q9UBD0 423 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 SWAP70Q9UH65 585 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 STK38LQ9Y2H1 464 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 CRB1P82279 1406 aa8.55□□□□□ -1.04
PTPRK-219ENST00000531050 SLIT1O75093 1534 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 HNRNPRO43390 633 aaKnown RBP8.54□□□□□ -1.04
PTPRK-219ENST00000531050 PRC1O43663 620 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 KRT86O43790 486 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 PRLRP16471 622 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 VCAM1P19320 739 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 HSD17B3P37058 310 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 CCT6AP40227 531 aaKnown RBP8.54□□□□□ -1.04
PTPRK-219ENST00000531050 ZNF131P52739 623 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 GUCY2DQ02846 1103 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 TRADDQ15628 312 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 CNPY1Q3B7I2 92 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 CCDC92Q53HC0 331 aaPredicted RBP8.54□□□□□ -1.04
PTPRK-219ENST00000531050 AGBL2Q5U5Z8 902 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 DHX32Q7L7V1 743 aaKnown RBP8.54□□□□□ -1.04
PTPRK-219ENST00000531050 CLASRPQ8N2M8 674 aaKnown RBP8.54□□□□□ -1.04
PTPRK-219ENST00000531050 TRIML1Q8N9V2 468 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 MDM1Q8TC05 714 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 WHAMMQ8TF30 809 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 KLHL29Q96CT2 875 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 GPATCH3Q96I76 525 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms