RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 RAD51AP2Q09MP3 1159 aa21.67■■□□□ 1.06
PCF11-203ENST00000530304 ORC2Q13416 577 aaPredicted RBP21.67■■□□□ 1.06
PCF11-203ENST00000530304 SPA17Q15506 151 aa21.67■■□□□ 1.06
PCF11-203ENST00000530304 CAGE1Q8TC20 777 aa21.67■■□□□ 1.06
PCF11-203ENST00000530304 TRERF1Q96PN7 1200 aa21.67■■□□□ 1.06
PCF11-203ENST00000530304 TSGA10Q9BZW7 698 aa21.67■■□□□ 1.06
PCF11-203ENST00000530304 DDX60LQ5H9U9 1706 aaKnown RBP21.67■■□□□ 1.06
PCF11-203ENST00000530304 GPR75-ASB3A0A0A6YYF3 556 aa21.67■■□□□ 1.06
PCF11-203ENST00000530304 A0A0U1RQG5 324 aaPredicted RBP21.67■■□□□ 1.06
PCF11-203ENST00000530304 USP17L5A8MUK1 530 aa21.67■■□□□ 1.06
PCF11-203ENST00000530304 PDE2AO00408 941 aaPredicted RBP21.67■■□□□ 1.06
PCF11-203ENST00000530304 CALCRLQ16602 461 aa21.67■■□□□ 1.06
PCF11-203ENST00000530304 MAP9Q49MG5 647 aa21.67■■□□□ 1.06
PCF11-203ENST00000530304 NDST4Q9H3R1 872 aa21.67■■□□□ 1.06
PCF11-203ENST00000530304 CAPN2P17655 700 aa21.66■■□□□ 1.06
PCF11-203ENST00000530304 HNRNPH3P31942 346 aaKnown RBP21.66■■□□□ 1.06
PCF11-203ENST00000530304 UNC13DQ70J99 1090 aa21.66■■□□□ 1.06
PCF11-203ENST00000530304 PNMA5Q96PV4 448 aa21.66■■□□□ 1.06
PCF11-203ENST00000530304 CDK5RAP2Q96SN8 1893 aa21.66■■□□□ 1.06
PCF11-203ENST00000530304 EPHB6O15197 1021 aa21.66■■□□□ 1.06
PCF11-203ENST00000530304 ZMYND10O75800 440 aa21.66■■□□□ 1.06
PCF11-203ENST00000530304 CCDC96Q2M329 555 aa21.66■■□□□ 1.06
PCF11-203ENST00000530304 DYMQ7RTS9 669 aa21.66■■□□□ 1.06
PCF11-203ENST00000530304 C2CD5Q86YS7 1000 aa21.66■■□□□ 1.06
PCF11-203ENST00000530304 CERS3Q8IU89 383 aa21.66■■□□□ 1.06
PCF11-203ENST00000530304 IQCDQ96DY2 449 aa21.66■■□□□ 1.06
PCF11-203ENST00000530304 FAM207AQ9NSI2 230 aaPredicted RBP21.66■■□□□ 1.06
PCF11-203ENST00000530304 ARHGAP20Q9P2F6 1191 aa21.66■■□□□ 1.06
PCF11-203ENST00000530304 SIK3Q9Y2K2 1263 aa21.66■■□□□ 1.06
PCF11-203ENST00000530304 ESYT2A0FGR8 921 aa21.65■■□□□ 1.06
PCF11-203ENST00000530304 TNNT3P45378 269 aaPredicted RBP21.65■■□□□ 1.06
PCF11-203ENST00000530304 SMCR8Q8TEV9 937 aaPredicted RBP21.65■■□□□ 1.06
PCF11-203ENST00000530304 LARP4BQ92615 738 aaKnown RBP21.65■■□□□ 1.06
PCF11-203ENST00000530304 RIOX1Q9H6W3 641 aa21.65■■□□□ 1.06
PCF11-203ENST00000530304 CD209Q9NNX6 404 aa21.65■■□□□ 1.06
PCF11-203ENST00000530304 STK17AQ9UEE5 414 aa21.65■■□□□ 1.06
PCF11-203ENST00000530304 PVALEFA0A1B0GWK0 134 aa21.65■■□□□ 1.06
PCF11-203ENST00000530304 FXR2P51116 673 aaKnown RBP eCLIP21.65■■□□□ 1.06
PCF11-203ENST00000530304 PCDHA13Q9Y5I0 950 aa21.65■■□□□ 1.06
PCF11-203ENST00000530304 FRMPD2Q68DX3 1309 aaPredicted RBP21.64■■□□□ 1.06
PCF11-203ENST00000530304 SLC37A4O43826 429 aa21.64■■□□□ 1.06
PCF11-203ENST00000530304 USO1O60763 962 aaKnown RBP21.64■■□□□ 1.06
PCF11-203ENST00000530304 C15orf52Q6ZUT6 534 aaKnown RBP21.64■■□□□ 1.06
PCF11-203ENST00000530304 IFIH1Q9BYX4 1025 aaKnown RBP21.64■■□□□ 1.06
PCF11-203ENST00000530304 CCNL1Q9UK58 526 aaPredicted RBP21.64■■□□□ 1.06
PCF11-203ENST00000530304 SYF2O95926 243 aaKnown RBP21.64■■□□□ 1.05
PCF11-203ENST00000530304 AARSP49588 968 aaKnown RBP eCLIP21.64■■□□□ 1.05
PCF11-203ENST00000530304 GPSM2P81274 684 aa21.64■■□□□ 1.05
PCF11-203ENST00000530304 LEKR1Q6ZMV7 388 aa21.64■■□□□ 1.05
PCF11-203ENST00000530304 TRIM58Q8NG06 486 aa21.64■■□□□ 1.05
PCF11-203ENST00000530304 COA7Q96BR5 231 aa21.64■■□□□ 1.05
PCF11-203ENST00000530304 CDK5RAP3Q96JB5 506 aa21.64■■□□□ 1.05
PCF11-203ENST00000530304 MMRN2Q9H8L6 949 aa21.64■■□□□ 1.05
PCF11-203ENST00000530304 CWC15Q9P013 229 aaKnown RBP21.64■■□□□ 1.05
PCF11-203ENST00000530304 HPCAL4Q9UM19 191 aa21.64■■□□□ 1.05
PCF11-203ENST00000530304 JRKLQ9Y4A0 524 aa21.64■■□□□ 1.05
PCF11-203ENST00000530304 EDIL3O43854 480 aa21.63■■□□□ 1.05
PCF11-203ENST00000530304 TDP2O95551 362 aa21.63■■□□□ 1.05
PCF11-203ENST00000530304 PDHBP11177 359 aa21.63■■□□□ 1.05
PCF11-203ENST00000530304 NOVP48745 357 aa21.63■■□□□ 1.05
PCF11-203ENST00000530304 RHBDL3P58872 404 aa21.63■■□□□ 1.05
PCF11-203ENST00000530304 C2orf54Q08AI8 447 aa21.63■■□□□ 1.05
PCF11-203ENST00000530304 MAN2A1Q16706 1144 aa21.63■■□□□ 1.05
PCF11-203ENST00000530304 GUF1Q8N442 669 aaKnown RBP21.63■■□□□ 1.05
PCF11-203ENST00000530304 CAPN6Q9Y6Q1 641 aa21.63■■□□□ 1.05
PCF11-203ENST00000530304 KIF11P52732 1056 aa21.63■■□□□ 1.05
PCF11-203ENST00000530304 TMEM266Q2M3C6 531 aa21.63■■□□□ 1.05
PCF11-203ENST00000530304 COG1Q8WTW3 980 aa21.63■■□□□ 1.05
PCF11-203ENST00000530304 GDAP1L1Q96MZ0 367 aa21.63■■□□□ 1.05
PCF11-203ENST00000530304 SH2D4AQ9H788 454 aa21.63■■□□□ 1.05
PCF11-203ENST00000530304 SNX12Q9UMY4 172 aa21.63■■□□□ 1.05
PCF11-203ENST00000530304 POTEMA6NI47 508 aa21.62■■□□□ 1.05
PCF11-203ENST00000530304 CCNI2Q6ZMN8 369 aaPredicted RBP21.62■■□□□ 1.05
PCF11-203ENST00000530304 CREG2Q8IUH2 290 aa21.62■■□□□ 1.05
PCF11-203ENST00000530304 FNBP4Q8N3X1 1017 aaPredicted RBP21.62■■□□□ 1.05
PCF11-203ENST00000530304 NUDT12Q9BQG2 462 aa21.62■■□□□ 1.05
PCF11-203ENST00000530304 FAM204AQ9H8W3 233 aa21.62■■□□□ 1.05
PCF11-203ENST00000530304 RNF40O75150 1001 aa21.62■■□□□ 1.05
PCF11-203ENST00000530304 TACC1O75410 805 aa21.62■■□□□ 1.05
PCF11-203ENST00000530304 FGFR1OPO95684 399 aaKnown RBP21.62■■□□□ 1.05
PCF11-203ENST00000530304 PLCG2P16885 1265 aa21.62■■□□□ 1.05
PCF11-203ENST00000530304 EIF4A3P38919 411 aaKnown RBP21.62■■□□□ 1.05
PCF11-203ENST00000530304 IQCEQ6IPM2 695 aa21.62■■□□□ 1.05
PCF11-203ENST00000530304 CCDC84Q86UT8 332 aaPredicted RBP21.62■■□□□ 1.05
PCF11-203ENST00000530304 DEF6Q9H4E7 631 aa21.62■■□□□ 1.05
PCF11-203ENST00000530304 MLXIPQ9HAP2 919 aa21.62■■□□□ 1.05
PCF11-203ENST00000530304 hCG_1984214I3L0E3 225 aa21.61■■□□□ 1.05
PCF11-203ENST00000530304 LCA5LO95447 670 aa21.61■■□□□ 1.05
PCF11-203ENST00000530304 MYBL2P10244 700 aa21.61■■□□□ 1.05
PCF11-203ENST00000530304 RFC4P35249 363 aa21.61■■□□□ 1.05
PCF11-203ENST00000530304 GSPT2Q8IYD1 628 aaKnown RBP21.61■■□□□ 1.05
PCF11-203ENST00000530304 ZNF713Q8N859 430 aaPredicted RBP21.61■■□□□ 1.05
PCF11-203ENST00000530304 RAD54LQ92698 747 aa21.61■■□□□ 1.05
PCF11-203ENST00000530304 ABCB11O95342 1321 aa21.61■■□□□ 1.05
PCF11-203ENST00000530304 LRRC53A6NM62 1247 aa21.61■■□□□ 1.05
PCF11-203ENST00000530304 UFL1O94874 794 aa21.61■■□□□ 1.05
PCF11-203ENST00000530304 ADCY7P51828 1080 aa21.61■■□□□ 1.05
PCF11-203ENST00000530304 LRRC63Q05C16 580 aa21.61■■□□□ 1.05
PCF11-203ENST00000530304 PDIA5Q14554 519 aa21.61■■□□□ 1.05
PCF11-203ENST00000530304 RRAGAQ7L523 313 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms