RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 PXMP2Q9NR77 195 aa20.06■□□□□ 0.8
USP35-202ENST00000528910 A0A1W2PQ45 241 aaPredicted RBP20.05■□□□□ 0.8
USP35-202ENST00000528910 A0A1W2PQY0 241 aa20.05■□□□□ 0.8
USP35-202ENST00000528910 GOLGA8AA7E2F4 631 aa20.05■□□□□ 0.8
USP35-202ENST00000528910 GOLGA8BA8MQT2 603 aa20.05■□□□□ 0.8
USP35-202ENST00000528910 MYCNP04198 464 aaPredicted RBP20.05■□□□□ 0.8
USP35-202ENST00000528910 C6orf222P0C671 652 aaPredicted RBP20.05■□□□□ 0.8
USP35-202ENST00000528910 DUSP28Q4G0W2 176 aa20.05■□□□□ 0.8
USP35-202ENST00000528910 PIBF1Q8WXW3 757 aa20.05■□□□□ 0.8
USP35-202ENST00000528910 BRF1Q92994 677 aa20.05■□□□□ 0.8
USP35-202ENST00000528910 SPC25Q9HBM1 224 aa20.05■□□□□ 0.8
USP35-202ENST00000528910 FAM217BQ9NTX9 383 aaPredicted RBP20.05■□□□□ 0.8
USP35-202ENST00000528910 GCOM1H8Y6P7 765 aaPredicted RBP20.04■□□□□ 0.8
USP35-202ENST00000528910 POLR2MP0CAP2 368 aa20.04■□□□□ 0.8
USP35-202ENST00000528910 ACLYP53396 1101 aa20.04■□□□□ 0.8
USP35-202ENST00000528910 EVCP57679 992 aa20.04■□□□□ 0.8
USP35-202ENST00000528910 IRX5P78411 483 aaPredicted RBP20.04■□□□□ 0.8
USP35-202ENST00000528910 FGD1P98174 961 aa20.04■□□□□ 0.8
USP35-202ENST00000528910 PPP2R5BQ15173 497 aa20.04■□□□□ 0.8
USP35-202ENST00000528910 SLC39A5Q6ZMH5 540 aa20.04■□□□□ 0.8
USP35-202ENST00000528910 RUFY3Q7L099 469 aa20.04■□□□□ 0.8
USP35-202ENST00000528910 PCSK9Q8NBP7 692 aaKnown RBP20.04■□□□□ 0.8
USP35-202ENST00000528910 SCFD2Q8WU76 684 aa20.04■□□□□ 0.8
USP35-202ENST00000528910 SCN10AQ9Y5Y9 1956 aa20.03■□□□□ 0.8
USP35-202ENST00000528910 PIK3CDO00329 1044 aa20.03■□□□□ 0.8
USP35-202ENST00000528910 EIF2AK2P19525 551 aaKnown RBP20.03■□□□□ 0.8
USP35-202ENST00000528910 HOXA13P31271 388 aaPredicted RBP20.03■□□□□ 0.8
USP35-202ENST00000528910 ATN1P54259 1190 aaPredicted RBP20.03■□□□□ 0.8
USP35-202ENST00000528910 RTP1P59025 263 aa20.03■□□□□ 0.8
USP35-202ENST00000528910 APOBRQ0VD83 1088 aa20.03■□□□□ 0.8
USP35-202ENST00000528910 TMEM63BQ5T3F8 832 aa20.03■□□□□ 0.8
USP35-202ENST00000528910 ARHGEF16Q5VV41 709 aa20.03■□□□□ 0.8
USP35-202ENST00000528910 IL17RAQ96F46 866 aa20.03■□□□□ 0.8
USP35-202ENST00000528910 PDCD2LQ9BRP1 358 aa20.03■□□□□ 0.8
USP35-202ENST00000528910 WDR11Q9BZH6 1224 aa20.03■□□□□ 0.8
USP35-202ENST00000528910 NKRFO15226 690 aaKnown RBP eCLIP20.02■□□□□ 0.8
USP35-202ENST00000528910 EIF5BO60841 1220 aaKnown RBP20.02■□□□□ 0.8
USP35-202ENST00000528910 PTGS1P23219 599 aa20.02■□□□□ 0.8
USP35-202ENST00000528910 CDC27P30260 824 aa20.02■□□□□ 0.8
USP35-202ENST00000528910 METAP2P50579 478 aaKnown RBP eCLIP20.02■□□□□ 0.8
USP35-202ENST00000528910 KCNA10Q16322 511 aa20.02■□□□□ 0.8
USP35-202ENST00000528910 NOL8Q76FK4 1167 aaKnown RBP20.02■□□□□ 0.8
USP35-202ENST00000528910 FERMT2Q96AC1 680 aa20.02■□□□□ 0.8
USP35-202ENST00000528910 MYH7BA7E2Y1 1941 aa20.02■□□□□ 0.79
USP35-202ENST00000528910 ASGR1P07306 291 aa20.01■□□□□ 0.79
USP35-202ENST00000528910 NR3C2P08235 984 aa20.01■□□□□ 0.79
USP35-202ENST00000528910 ANAPC15P60006 121 aa20.01■□□□□ 0.79
USP35-202ENST00000528910 TOB2Q14106 344 aaPredicted RBP20.01■□□□□ 0.79
USP35-202ENST00000528910 PGM5Q15124 567 aa20.01■□□□□ 0.79
USP35-202ENST00000528910 STXBP2Q15833 593 aa20.01■□□□□ 0.79
USP35-202ENST00000528910 FSCN1Q16658 493 aaKnown RBP20.01■□□□□ 0.79
USP35-202ENST00000528910 GNASQ5JWF2 1037 aa20.01■□□□□ 0.79
USP35-202ENST00000528910 AP5M1Q9H0R1 490 aa20.01■□□□□ 0.79
USP35-202ENST00000528910 CYP46A1Q9Y6A2 500 aa20.01■□□□□ 0.79
USP35-202ENST00000528910 DNAH12Q6ZR08 3092 aa20.01■□□□□ 0.79
USP35-202ENST00000528910 ELP1O95163 1332 aa20.01■□□□□ 0.79
USP35-202ENST00000528910 CCDC196A0A1B0GTZ2 297 aa20■□□□□ 0.79
USP35-202ENST00000528910 hCG_1642624A0A1W2PR95 340 aa20■□□□□ 0.79
USP35-202ENST00000528910 hCG_1984214I3L0E3 225 aa20■□□□□ 0.79
USP35-202ENST00000528910 ARIH2O95376 493 aa20■□□□□ 0.79
USP35-202ENST00000528910 BEX3Q00994 111 aa20■□□□□ 0.79
USP35-202ENST00000528910 TTLL4Q14679 1199 aa20■□□□□ 0.79
USP35-202ENST00000528910 TRIM60Q495X7 471 aa20■□□□□ 0.79
USP35-202ENST00000528910 PPP1R18Q6NYC8 613 aa20■□□□□ 0.79
USP35-202ENST00000528910 CCDC62Q6P9F0 684 aa20■□□□□ 0.79
USP35-202ENST00000528910 CCDC82Q8N4S0 544 aa20■□□□□ 0.79
USP35-202ENST00000528910 ZNF713Q8N859 430 aaPredicted RBP20■□□□□ 0.79
USP35-202ENST00000528910 IL31RAQ8NI17 732 aa20■□□□□ 0.79
USP35-202ENST00000528910 PRO3102Q9H379 93 aa20■□□□□ 0.79
USP35-202ENST00000528910 STARD7Q9NQZ5 370 aa20■□□□□ 0.79
USP35-202ENST00000528910 MEIS2O14770 477 aa19.99■□□□□ 0.79
USP35-202ENST00000528910 DYNC1LI2O43237 492 aaPredicted RBP19.99■□□□□ 0.79
USP35-202ENST00000528910 EIF3JO75822 258 aaKnown RBP19.99■□□□□ 0.79
USP35-202ENST00000528910 WWC2Q6AWC2 1192 aa19.99■□□□□ 0.79
USP35-202ENST00000528910 TEX2Q8IWB9 1127 aa19.99■□□□□ 0.79
USP35-202ENST00000528910 GPKOWQ92917 476 aaPredicted RBP eCLIP19.99■□□□□ 0.79
USP35-202ENST00000528910 GLT1D1Q96MS3 346 aa19.99■□□□□ 0.79
USP35-202ENST00000528910 UPF3BQ9BZI7 483 aaKnown RBP19.99■□□□□ 0.79
USP35-202ENST00000528910 ZMYND8Q9ULU4 1186 aaPredicted RBP19.99■□□□□ 0.79
USP35-202ENST00000528910 DOCK5Q9H7D0 1870 aa19.99■□□□□ 0.79
USP35-202ENST00000528910 TXNP10599 105 aaKnown RBP19.98■□□□□ 0.79
USP35-202ENST00000528910 HEATR3Q7Z4Q2 680 aa19.98■□□□□ 0.79
USP35-202ENST00000528910 VSIG10LQ86VR7 867 aa19.98■□□□□ 0.79
USP35-202ENST00000528910 FCHSD1Q86WN1 690 aa19.98■□□□□ 0.79
USP35-202ENST00000528910 OR6J1Q8NGC5 347 aa19.98■□□□□ 0.79
USP35-202ENST00000528910 SMARCC2Q8TAQ2 1214 aa19.98■□□□□ 0.79
USP35-202ENST00000528910 CUL5Q93034 780 aa19.98■□□□□ 0.79
USP35-202ENST00000528910 NAP1L2Q9ULW6 460 aaPredicted RBP19.98■□□□□ 0.79
USP35-202ENST00000528910 ATP11BQ9Y2G3 1177 aa19.98■□□□□ 0.79
USP35-202ENST00000528910 ZEB2O60315 1214 aa19.97■□□□□ 0.79
USP35-202ENST00000528910 CABYRO75952 493 aa19.97■□□□□ 0.79
USP35-202ENST00000528910 RGS20O76081 388 aa19.97■□□□□ 0.79
USP35-202ENST00000528910 PDIA3P30101 505 aaKnown RBP19.97■□□□□ 0.79
USP35-202ENST00000528910 CCND2P30279 289 aa19.97■□□□□ 0.79
USP35-202ENST00000528910 ADD1P35611 737 aaKnown RBP19.97■□□□□ 0.79
USP35-202ENST00000528910 TYW1BQ6NUM6 668 aa19.97■□□□□ 0.79
USP35-202ENST00000528910 USP17L6PQ6QN14 398 aa19.97■□□□□ 0.79
USP35-202ENST00000528910 SEPT14Q6ZU15 432 aa19.97■□□□□ 0.79
USP35-202ENST00000528910 ANKRD33Q7Z3H0 272 aa19.97■□□□□ 0.79
USP35-202ENST00000528910 PSTPIP2Q9H939 334 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms