RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 PPP2R5BQ15173 497 aa12.55□□□□□ -0.4
VPS26B-203ENST00000525918 NBPF20Q3BBV1 942 aa12.55□□□□□ -0.4
VPS26B-203ENST00000525918 FAM47CQ5HY64 1035 aa12.55□□□□□ -0.4
VPS26B-203ENST00000525918 PPP2R2DQ66LE6 453 aa12.55□□□□□ -0.4
VPS26B-203ENST00000525918 NFRKBQ6P4R8 1299 aa12.55□□□□□ -0.4
VPS26B-203ENST00000525918 RGS22Q8NE09 1264 aa12.55□□□□□ -0.4
VPS26B-203ENST00000525918 MAF1Q9H063 256 aa12.55□□□□□ -0.4
VPS26B-203ENST00000525918 TSPYL2Q9H2G4 693 aaPredicted RBP12.55□□□□□ -0.4
VPS26B-203ENST00000525918 CHD7Q9P2D1 2997 aa12.55□□□□□ -0.4
VPS26B-203ENST00000525918 TTC28Q96AY4 2481 aa12.54□□□□□ -0.4
VPS26B-203ENST00000525918 LAMA4Q16363 1823 aa12.54□□□□□ -0.4
VPS26B-203ENST00000525918 TRIM6-TRIM34B2RNG4 842 aa12.54□□□□□ -0.4
VPS26B-203ENST00000525918 PITPNM1O00562 1244 aa12.54□□□□□ -0.4
VPS26B-203ENST00000525918 TXNP10599 105 aaKnown RBP12.54□□□□□ -0.4
VPS26B-203ENST00000525918 ACTN1P12814 892 aa12.54□□□□□ -0.4
VPS26B-203ENST00000525918 MYOGP15173 224 aa12.54□□□□□ -0.4
VPS26B-203ENST00000525918 RFC2P35250 354 aa12.54□□□□□ -0.4
VPS26B-203ENST00000525918 MFAP1P55081 439 aaKnown RBP12.54□□□□□ -0.4
VPS26B-203ENST00000525918 PTPN11Q06124 597 aaPredicted RBP12.54□□□□□ -0.4
VPS26B-203ENST00000525918 NMIQ13287 307 aaPredicted RBP12.54□□□□□ -0.4
VPS26B-203ENST00000525918 HDAC1Q13547 482 aaPredicted RBP12.54□□□□□ -0.4
VPS26B-203ENST00000525918 TTLL4Q14679 1199 aa12.54□□□□□ -0.4
VPS26B-203ENST00000525918 GPATCH4Q5T3I0 446 aaKnown RBP12.54□□□□□ -0.4
VPS26B-203ENST00000525918 DEFB128Q7Z7B8 93 aa12.54□□□□□ -0.4
VPS26B-203ENST00000525918 ZNF589Q86UQ0 364 aaPredicted RBP12.54□□□□□ -0.4
VPS26B-203ENST00000525918 RNF41Q9H4P4 317 aaPredicted RBP12.54□□□□□ -0.4
VPS26B-203ENST00000525918 CCDC171Q6TFL3 1326 aa12.54□□□□□ -0.4
VPS26B-203ENST00000525918 MYH7BA7E2Y1 1941 aa12.54□□□□□ -0.4
VPS26B-203ENST00000525918 REV3LO60673 3130 aa12.53□□□□□ -0.4
VPS26B-203ENST00000525918 TCF20Q9UGU0 1960 aaKnown RBP12.53□□□□□ -0.4
VPS26B-203ENST00000525918 IQCF3P0C7M6 154 aa12.53□□□□□ -0.4
VPS26B-203ENST00000525918 NT5C2P49902 561 aa12.53□□□□□ -0.4
VPS26B-203ENST00000525918 RRP1P56182 461 aaKnown RBP12.53□□□□□ -0.4
VPS26B-203ENST00000525918 TMEM67Q5HYA8 995 aa12.53□□□□□ -0.4
VPS26B-203ENST00000525918 DGKHQ86XP1 1220 aa12.53□□□□□ -0.4
VPS26B-203ENST00000525918 RETREG2Q8NC44 543 aa12.53□□□□□ -0.4
VPS26B-203ENST00000525918 ESR2Q92731 530 aa12.53□□□□□ -0.4
VPS26B-203ENST00000525918 TET1Q8NFU7 2136 aa12.52□□□□□ -0.4
VPS26B-203ENST00000525918 ZNF213O14771 459 aa12.52□□□□□ -0.41
VPS26B-203ENST00000525918 BFSP2Q13515 415 aa12.52□□□□□ -0.41
VPS26B-203ENST00000525918 USH1GQ495M9 461 aa12.52□□□□□ -0.41
VPS26B-203ENST00000525918 CCDC178Q5BJE1 867 aa12.52□□□□□ -0.41
VPS26B-203ENST00000525918 TBC1D10CQ8IV04 446 aa12.52□□□□□ -0.41
VPS26B-203ENST00000525918 IL27Q8NEV9 243 aa12.52□□□□□ -0.41
VPS26B-203ENST00000525918 PHOSPHO2Q8TCD6 241 aa12.52□□□□□ -0.41
VPS26B-203ENST00000525918 ADAMTS19Q8TE59 1207 aa12.52□□□□□ -0.41
VPS26B-203ENST00000525918 COPS5Q92905 334 aa12.52□□□□□ -0.41
VPS26B-203ENST00000525918 RILPL2Q969X0 211 aa12.52□□□□□ -0.41
VPS26B-203ENST00000525918 CRBNQ96SW2 442 aa12.52□□□□□ -0.41
VPS26B-203ENST00000525918 SLC9A7Q96T83 725 aa12.52□□□□□ -0.41
VPS26B-203ENST00000525918 ZKSCAN3Q9BRR0 538 aa12.52□□□□□ -0.41
VPS26B-203ENST00000525918 TRANK1O15050 2925 aa12.52□□□□□ -0.41
VPS26B-203ENST00000525918 PTPRSQ13332 1948 aa12.51□□□□□ -0.41
VPS26B-203ENST00000525918 CA3P07451 260 aa12.51□□□□□ -0.41
VPS26B-203ENST00000525918 GOLGA8HP0CJ92 632 aa12.51□□□□□ -0.41
VPS26B-203ENST00000525918 POU3F3P20264 500 aaPredicted RBP12.51□□□□□ -0.41
VPS26B-203ENST00000525918 IQCA1Q86XH1 822 aa12.51□□□□□ -0.41
VPS26B-203ENST00000525918 NSUN6Q8TEA1 469 aaKnown RBP12.51□□□□□ -0.41
VPS26B-203ENST00000525918 FTOQ9C0B1 505 aaKnown RBP eCLIP12.51□□□□□ -0.41
VPS26B-203ENST00000525918 UBA5Q9GZZ9 404 aa12.51□□□□□ -0.41
VPS26B-203ENST00000525918 NOD1Q9Y239 953 aa12.51□□□□□ -0.41
VPS26B-203ENST00000525918 XIRP2A4UGR9 3374 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 KIF28PB7ZC32 967 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 ARIH2O95376 493 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 SDSP20132 328 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 CDC37Q16543 378 aaPredicted RBP12.5□□□□□ -0.41
VPS26B-203ENST00000525918 PTGISQ16647 500 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 AAK1Q2M2I8 961 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 CCDC62Q6P9F0 684 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 MCF2L2Q86YR7 1114 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 MICALL1Q8N3F8 863 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 CCDC155Q8N6L0 562 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 PNMA1Q8ND90 353 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 PPP1R13LQ8WUF5 828 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 ANKS1AQ92625 1134 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 IWS1Q96ST2 819 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 UHRF1Q96T88 793 aaPredicted RBP12.5□□□□□ -0.41
VPS26B-203ENST00000525918 LNPKQ9C0E8 428 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 CPVLQ9H3G5 476 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 KAT14Q9H8E8 782 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 ABCB11O95342 1321 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 NEDD4P46934 1319 aa12.5□□□□□ -0.41
VPS26B-203ENST00000525918 GTPBP6O43824 516 aaPredicted RBP12.49□□□□□ -0.41
VPS26B-203ENST00000525918 KDM4AO75164 1064 aa12.49□□□□□ -0.41
VPS26B-203ENST00000525918 BAIAP3O94812 1187 aa12.49□□□□□ -0.41
VPS26B-203ENST00000525918 GH1P01241 217 aa12.49□□□□□ -0.41
VPS26B-203ENST00000525918 CASTP20810 708 aaKnown RBP12.49□□□□□ -0.41
VPS26B-203ENST00000525918 CHMP4BP1P59074 171 aa12.49□□□□□ -0.41
VPS26B-203ENST00000525918 AAMPQ13685 434 aa12.49□□□□□ -0.41
VPS26B-203ENST00000525918 STXBP2Q15833 593 aa12.49□□□□□ -0.41
VPS26B-203ENST00000525918 LY6KQ17RY6 165 aa12.49□□□□□ -0.41
VPS26B-203ENST00000525918 ASPRV1Q53RT3 343 aa12.49□□□□□ -0.41
VPS26B-203ENST00000525918 SEPT14Q6ZU15 432 aa12.49□□□□□ -0.41
VPS26B-203ENST00000525918 SESTD1Q86VW0 696 aa12.49□□□□□ -0.41
VPS26B-203ENST00000525918 HERC6Q8IVU3 1022 aa12.49□□□□□ -0.41
VPS26B-203ENST00000525918 ADGRF4Q8IZF3 695 aa12.49□□□□□ -0.41
VPS26B-203ENST00000525918 CAGE1Q8TC20 777 aa12.49□□□□□ -0.41
VPS26B-203ENST00000525918 SYTL5Q8TDW5 730 aaPredicted RBP12.49□□□□□ -0.41
VPS26B-203ENST00000525918 AFAP1L1Q8TED9 768 aa12.49□□□□□ -0.41
VPS26B-203ENST00000525918 AFG1LQ8WV93 481 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms