RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 PIK3CDO00329 1044 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 NKRFO15226 690 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 PRPF3O43395 683 aaKnown RBP6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 DUSP11O75319 330 aaKnown RBP6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 EIF3JO75822 258 aaKnown RBP6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 STAM2O75886 525 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 DEXIO95424 95 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 SNAI1O95863 264 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 FOSP01100 380 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 IGHA2P01877 340 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 C6orf222P0C671 652 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 ZNF865P0CJ78 1059 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 MYCLP12524 364 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 IFNAR1P17181 557 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 GNA11P29992 359 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 RBM25P49756 843 aaKnown RBP6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 AK2P54819 239 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 GHRHRQ02643 423 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 TTLL4Q14679 1199 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 RABEP1Q15276 862 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 PFKFB3Q16875 520 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 SLC35G1Q2M3R5 365 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 ANO1Q5XXA6 986 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 LHX8Q68G74 356 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 WWC2Q6AWC2 1192 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 XRRA1Q6P2D8 792 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 TLK2Q86UE8 772 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 PCSK9Q8NBP7 692 aaKnown RBP6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 MORC4Q8TE76 937 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 PHKBQ93100 1093 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 SHISA4Q96DD7 197 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 IL17RAQ96F46 866 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 FGD4Q96M96 766 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 PURBQ96QR8 312 aaKnown RBP6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 TAAR1Q96RJ0 339 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 WDR11Q9BZH6 1224 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 NCOA5Q9HCD5 579 aaKnown RBP6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 BARHL2Q9NY43 387 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 LIMCH1Q9UPQ0 1083 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 SYNRGQ9UMZ2 1314 aa6.2□□□□□ -1.42
HMGB1P40-201ENST00000525121 RBBP6Q7Z6E9 1792 aaKnown RBP6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 ESYT2A0FGR8 921 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 SMCO2A6NFE2 343 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 MOXD2PA6NHM9 499 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 STXBP3O00186 592 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 OPLAHO14841 1288 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 PFKFB2O60825 505 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 PGK1P00558 417 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 NR3C2P08235 984 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 TXNP10599 105 aaKnown RBP6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 EDNRBP24530 442 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 ADCYAP1R1P41586 468 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 CPT1AP50416 773 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 NLRP5P59047 1200 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 FUT2Q10981 343 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 AP3B2Q13367 1082 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 TRIM29Q14134 588 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 PGM5Q15124 567 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 LRRC41Q15345 812 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 GJC2Q5T442 439 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 KCNV1Q6PIU1 500 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 SEPT14Q6ZU15 432 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 NLRX1Q86UT6 975 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 FAM177A1Q8N128 213 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 REXO1Q8N1G1 1221 aaKnown RBP6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 OR6J1Q8NGC5 347 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 TBC1D5Q92609 795 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 DPF3Q92784 378 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 VTI1AQ96AJ9 217 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 PAWRQ96IZ0 340 aaKnown RBP6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 CDHR1Q96JP9 859 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 ZSCAN31Q96LW9 406 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 PDCD2LQ9BRP1 358 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 LARP6Q9BRS8 491 aaKnown RBP6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 TSEN34Q9BSV6 310 aaKnown RBP6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 BRMS1Q9HCU9 246 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 RIC8AQ9NPQ8 531 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 SH3GLB2Q9NR46 395 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 SH2B1Q9NRF2 756 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 FAM217BQ9NTX9 383 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 COL20A1Q9P218 1284 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 TPCN1Q9ULQ1 816 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 Q9Y3F1 56 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 NR2E3Q9Y5X4 410 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 MRVI1Q9Y6F6 885 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 ASTN1O14525 1302 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 STK36Q9NRP7 1315 aa6.19□□□□□ -1.42
HMGB1P40-201ENST00000525121 DYNC1LI2O43237 492 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 FIBPO43427 364 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 EVI5O60447 810 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 KPNA6O60684 536 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 CABYRO75952 493 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 GH1P01241 217 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 TGFB3P10600 412 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 CST5P28325 142 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 ZNF76P36508 570 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 MCM2P49736 904 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 GJA9P57773 515 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 SCRN1Q12765 414 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 FSCN1Q16658 493 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms