RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 MAGEC2Q9UBF1 373 aaPredicted RBP15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 ATF5Q9Y2D1 282 aaPredicted RBP15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 PCDHA1Q9Y5I3 950 aa15.42■□□□□ 0.06
LDLRAD3-202ENST00000524419 MARCH6O60337 910 aa15.41■□□□□ 0.06
LDLRAD3-202ENST00000524419 RBM26Q5T8P6 1007 aaKnown RBP15.41■□□□□ 0.06
LDLRAD3-202ENST00000524419 CNNM4Q6P4Q7 775 aa15.41■□□□□ 0.06
LDLRAD3-202ENST00000524419 TOGARAM2Q6ZUX3 1019 aa15.41■□□□□ 0.06
LDLRAD3-202ENST00000524419 CREBRFQ8IUR6 639 aa15.41■□□□□ 0.06
LDLRAD3-202ENST00000524419 SNX29Q8TEQ0 813 aa15.41■□□□□ 0.06
LDLRAD3-202ENST00000524419 CPLX3Q8WVH0 158 aa15.41■□□□□ 0.06
LDLRAD3-202ENST00000524419 GMCL1Q96IK5 515 aa15.41■□□□□ 0.06
LDLRAD3-202ENST00000524419 PNMA5Q96PV4 448 aa15.41■□□□□ 0.06
LDLRAD3-202ENST00000524419 PRDM10Q9NQV6 1147 aa15.41■□□□□ 0.06
LDLRAD3-202ENST00000524419 POTEMA6NI47 508 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 H2AFXP16104 143 aaPredicted RBP15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 SIAH1Q8IUQ4 282 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 CSRNP1Q96S65 589 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 LRRC27Q9C0I9 530 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 F5H6K3 240 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 GYPCP04921 128 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 CCNE1P24864 410 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 CASP14P31944 242 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 PMS1P54277 932 aaKnown RBP15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 KLRC3Q07444 240 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 IKQ13123 557 aaPredicted RBP15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 MCM6Q14566 821 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 TMEM119Q4V9L6 283 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 TTI2Q6NXR4 508 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 RTKN2Q8IZC4 609 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 LARP4BQ92615 738 aaKnown RBP15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 RAD54LQ92698 747 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 P2RX5Q93086 422 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 PRMT6Q96LA8 375 aaPredicted RBP15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 BLOC1S4Q9NUP1 217 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 FAM53CQ9NYF3 392 aa15.4■□□□□ 0.06
LDLRAD3-202ENST00000524419 NDUFB10O96000 172 aa15.39■□□□□ 0.05
LDLRAD3-202ENST00000524419 GH2P01242 217 aa15.39■□□□□ 0.05
LDLRAD3-202ENST00000524419 UBXN1Q04323 297 aa15.39■□□□□ 0.05
LDLRAD3-202ENST00000524419 ERCC6LQ2NKX8 1250 aa15.39■□□□□ 0.05
LDLRAD3-202ENST00000524419 COBLL1Q53SF7 1204 aa15.39■□□□□ 0.05
LDLRAD3-202ENST00000524419 SYDE2Q5VT97 1194 aa15.39■□□□□ 0.05
LDLRAD3-202ENST00000524419 MCTP2Q6DN12 878 aa15.39■□□□□ 0.05
LDLRAD3-202ENST00000524419 RSBN1LQ6PCB5 846 aaPredicted RBP15.39■□□□□ 0.05
LDLRAD3-202ENST00000524419 IRF2BP1Q8IU81 584 aa15.39■□□□□ 0.05
LDLRAD3-202ENST00000524419 FAM114A1Q8IWE2 563 aa15.39■□□□□ 0.05
LDLRAD3-202ENST00000524419 TTLL6Q8N841 843 aa15.39■□□□□ 0.05
LDLRAD3-202ENST00000524419 ANO3Q9BYT9 981 aa15.39■□□□□ 0.05
LDLRAD3-202ENST00000524419 HERC5Q9UII4 1024 aaKnown RBP15.39■□□□□ 0.05
LDLRAD3-202ENST00000524419 LGALS16A8MUM7 142 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 URI1O94763 535 aaPredicted RBP15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 CASQ1P31415 396 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 AP3B2Q13367 1082 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 CSGALNACT2Q8N6G5 542 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 PSMD1Q99460 953 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 AMNQ9BXJ7 453 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 PRDM4Q9UKN5 801 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 HDAC9Q9UKV0 1011 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 SYNPO2Q9UMS6 1093 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 KDM3AQ9Y4C1 1321 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 PVALEFA0A1B0GWK0 134 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 SPDYE2BA6NHP3 402 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 MYMKA6NI61 221 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 SOWAHDA6NJG2 315 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 USP17L15C9J2P7 530 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 USP17L13C9JLJ4 530 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 USP17L11C9JVI0 530 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 USP17L18D6R9N7 530 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 USP17L22D6RA61 530 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 USP17L17D6RBQ6 530 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 USP17L19D6RCP7 530 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 USP17L20D6RJB6 530 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 CCDC175P0C221 793 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 SPDYE6P0CI01 402 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 HOXA7P31268 230 aaPredicted RBP15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 USP11P51784 963 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 USP17L24Q0WX57 530 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 STK4Q13043 487 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 USP17L6PQ6QN14 398 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 UNC13DQ70J99 1090 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 FBXO11Q86XK2 927 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 KRT222Q8N1A0 295 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 LRRN4CLQ8ND94 238 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 MNS1Q8NEH6 495 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 HAS1Q92839 578 aa15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 NUP88Q99567 741 aaPredicted RBP15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 DUSP9Q99956 384 aaKnown RBP15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.38■□□□□ 0.05
LDLRAD3-202ENST00000524419 EFCAB8A8MWE9 144 aa15.37■□□□□ 0.05
LDLRAD3-202ENST00000524419 TCP10L2B9ZVM9 353 aa15.37■□□□□ 0.05
LDLRAD3-202ENST00000524419 FANCGO15287 622 aa15.37■□□□□ 0.05
LDLRAD3-202ENST00000524419 FCER1AP12319 257 aa15.37■□□□□ 0.05
LDLRAD3-202ENST00000524419 BMP3P12645 472 aa15.37■□□□□ 0.05
LDLRAD3-202ENST00000524419 FXR1P51114 621 aaKnown RBP eCLIP15.37■□□□□ 0.05
LDLRAD3-202ENST00000524419 GABPB1Q06547 395 aaPredicted RBP15.37■□□□□ 0.05
LDLRAD3-202ENST00000524419 LARGE2Q8N3Y3 721 aa15.37■□□□□ 0.05
LDLRAD3-202ENST00000524419 UBXN4Q92575 508 aa15.37■□□□□ 0.05
LDLRAD3-202ENST00000524419 DESI2Q9BSY9 194 aa15.37■□□□□ 0.05
LDLRAD3-202ENST00000524419 PES1O00541 588 aaKnown RBP15.36■□□□□ 0.05
LDLRAD3-202ENST00000524419 SLC26A4O43511 780 aa15.36■□□□□ 0.05
LDLRAD3-202ENST00000524419 TADA3O75528 432 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms