RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 KANSL3Q9P2N6 904 aa6.54□□□□□ -1.36
PABPC1-223ENST00000523636 PARP2Q9UGN5 583 aa6.54□□□□□ -1.36
PABPC1-223ENST00000523636 GGA1Q9UJY5 639 aa6.54□□□□□ -1.36
PABPC1-223ENST00000523636 LAS1LQ9Y4W2 734 aaKnown RBP6.54□□□□□ -1.36
PABPC1-223ENST00000523636 ARAP2Q8WZ64 1704 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 MAP3K15Q6ZN16 1313 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 NEURL1BA8MQ27 555 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 ERVV-1B6SEH8 477 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 ADH7P40394 386 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 ACAP1Q15027 740 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.53□□□□□ -1.36
PABPC1-223ENST00000523636 NAALADL2Q58DX5 795 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 HFE2Q6ZVN8 426 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 FCHSD1Q86WN1 690 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 NCAPG2Q86XI2 1143 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 CEP120Q8N960 986 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 TIFAQ96CG3 184 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 SRCIN1Q9C0H9 1055 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 RBSNQ9H1K0 784 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 NPHS2Q9NP85 383 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 FAM86C1Q9NVL1 165 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 SLC6A14Q9UN76 642 aa6.53□□□□□ -1.36
PABPC1-223ENST00000523636 ZNF804BA4D1E1 1349 aa6.52□□□□□ -1.37
PABPC1-223ENST00000523636 CYSRT1A8MQ03 144 aa6.52□□□□□ -1.37
PABPC1-223ENST00000523636 GRXCR1A8MXD5 290 aa6.52□□□□□ -1.37
PABPC1-223ENST00000523636 POLR3DP05423 398 aaPredicted RBP6.52□□□□□ -1.37
PABPC1-223ENST00000523636 EPXP11678 715 aa6.52□□□□□ -1.37
PABPC1-223ENST00000523636 ALAS2P22557 587 aa6.52□□□□□ -1.37
PABPC1-223ENST00000523636 ID4P47928 161 aa6.52□□□□□ -1.37
PABPC1-223ENST00000523636 IREB2P48200 963 aaKnown RBP6.52□□□□□ -1.37
PABPC1-223ENST00000523636 FCGRTP55899 365 aa6.52□□□□□ -1.37
PABPC1-223ENST00000523636 PEAR1Q5VY43 1037 aaPredicted RBP6.52□□□□□ -1.37
PABPC1-223ENST00000523636 APBB1IPQ7Z5R6 666 aaPredicted RBP6.52□□□□□ -1.37
PABPC1-223ENST00000523636 EPS8L3Q8TE67 593 aaKnown RBP6.52□□□□□ -1.37
PABPC1-223ENST00000523636 NSUN5Q96P11 429 aaKnown RBP6.52□□□□□ -1.37
PABPC1-223ENST00000523636 SUV39H2Q9H5I1 410 aa6.52□□□□□ -1.37
PABPC1-223ENST00000523636 FRRS1LQ9P0K9 344 aa6.52□□□□□ -1.37
PABPC1-223ENST00000523636 KLHL42Q9P2K6 505 aa6.52□□□□□ -1.37
PABPC1-223ENST00000523636 SNCAIPQ9Y6H5 919 aa6.52□□□□□ -1.37
PABPC1-223ENST00000523636 AK5Q9Y6K8 562 aa6.52□□□□□ -1.37
PABPC1-223ENST00000523636 USP9XQ93008 2570 aaPredicted RBP6.51□□□□□ -1.37
PABPC1-223ENST00000523636 A0A1W2PP55 124 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 TRIM43BA6NCK2 446 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 GHRHP01286 108 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 IL13P35225 146 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 GMPRP36959 345 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 PSMD2Q13200 908 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 MRPL58Q14197 206 aaKnown RBP6.51□□□□□ -1.37
PABPC1-223ENST00000523636 MAP3K21Q5TCX8 1036 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 DDX46Q7L014 1031 aaKnown RBP6.51□□□□□ -1.37
PABPC1-223ENST00000523636 DPH6Q7L8W6 267 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 ASCL5Q7RTU5 278 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 CNPY4Q8N129 248 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.51□□□□□ -1.375e-71■■□□□ 13.5
PABPC1-223ENST00000523636 MORC4Q8TE76 937 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 TTC9Q92623 222 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 ACDQ96AP0 544 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 TRIM43Q96BQ3 446 aaPredicted RBP6.51□□□□□ -1.37
PABPC1-223ENST00000523636 TEPSINQ96N21 525 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 EYA3Q99504 573 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 PBX4Q9BYU1 374 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 IGFLR1Q9H665 355 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 MRS2Q9HD23 443 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 DAGLAQ9Y4D2 1042 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 ATRNL1Q5VV63 1379 aa6.51□□□□□ -1.37
PABPC1-223ENST00000523636 PTPRFP10586 1907 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 SORBS3O60504 671 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 GADD45BO75293 160 aaPredicted RBP6.5□□□□□ -1.37
PABPC1-223ENST00000523636 CYP2C8P10632 490 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 CETPP11597 493 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 IRS1P35568 1242 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 TBC1D8BQ0IIM8 1120 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 FOXD4L6Q3SYB3 417 aaPredicted RBP6.5□□□□□ -1.37
PABPC1-223ENST00000523636 DIEXFQ68CQ4 756 aaKnown RBP6.5□□□□□ -1.37
PABPC1-223ENST00000523636 KANK3Q6NY19 840 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 FOXD4L3Q6VB84 417 aaPredicted RBP6.5□□□□□ -1.37
PABPC1-223ENST00000523636 FAM35AQ86V20 835 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 NGEFQ8N5V2 710 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 TMEM102Q8N9M5 508 aaPredicted RBP6.5□□□□□ -1.37
PABPC1-223ENST00000523636 GPATCH3Q96I76 525 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 RNPC3Q96LT9 517 aaKnown RBP6.5□□□□□ -1.37
PABPC1-223ENST00000523636 OSMRQ99650 979 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 ZKSCAN3Q9BRR0 538 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 ZC3H12CQ9C0D7 883 aaKnown RBP6.5□□□□□ -1.37
PABPC1-223ENST00000523636 BHLHE41Q9C0J9 482 aaPredicted RBP6.5□□□□□ -1.37
PABPC1-223ENST00000523636 C12orf49Q9H741 205 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 DZANK1Q9NVP4 752 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 PPP4R2Q9NY27 417 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 PPP2R3BQ9Y5P8 575 aa6.5□□□□□ -1.37
PABPC1-223ENST00000523636 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.5□□□□□ -1.37
PABPC1-223ENST00000523636 DSPP15924 2871 aaKnown RBP6.5□□□□□ -1.37
PABPC1-223ENST00000523636 CLRN2A0PK11 232 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 J3QW42 95 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 PDHXO00330 501 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 OIP5O43482 229 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 PEX14O75381 377 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 HMGCRP04035 888 aa6.49□□□□□ -1.37
PABPC1-223ENST00000523636 EIF2AK2P19525 551 aaKnown RBP6.49□□□□□ -1.37
PABPC1-223ENST00000523636 EIF4BP23588 611 aaKnown RBP6.49□□□□□ -1.37
PABPC1-223ENST00000523636 GRM2Q14416 872 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms