RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 ZC3H3Q8IXZ2 948 aaKnown RBP9.27□□□□□ -0.93
CSMD1-213ENST00000523488 RASGEF1CQ8N431 466 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 IRGQQ8WZA9 623 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 AIDAQ96BJ3 306 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 CHP1Q99653 195 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 LACRTQ9GZZ8 138 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 TLE6Q9H808 572 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 ARFGEF1Q9Y6D6 1849 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 CAND2O75155 1236 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 KIF4AO95239 1232 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 MMP13P45452 471 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 TRIM29Q14134 588 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 ODF2Q5BJF6 829 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 MIIPQ5JXC2 388 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 THOC1Q96FV9 657 aaKnown RBP9.27□□□□□ -0.93
CSMD1-213ENST00000523488 TMEM87BQ96K49 555 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 ALS2CR12Q96Q35 445 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 TLR10Q9BXR5 811 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 FAM129AQ9BZQ8 928 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 TMX4Q9H1E5 349 aaPredicted RBP9.27□□□□□ -0.93
CSMD1-213ENST00000523488 CNOT10Q9H9A5 744 aaKnown RBP9.27□□□□□ -0.93
CSMD1-213ENST00000523488 LY9Q9HBG7 655 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 HAUS2Q9NVX0 235 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 PLAGL2Q9UPG8 496 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 MAP3K2Q9Y2U5 619 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 MYH10P35580 1976 aa9.27□□□□□ -0.93
CSMD1-213ENST00000523488 H7C1D1 291 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 GJB6O95452 261 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 ZNF131P52739 623 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 GUCY1A3Q02108 690 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 ZNF658Q5TYW1 1059 aaPredicted RBP9.26□□□□□ -0.93
CSMD1-213ENST00000523488 RAB11FIP4Q86YS3 637 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 ALDH16A1Q8IZ83 802 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 ADSSL1Q8N142 457 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 SH2D3CQ8N5H7 860 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 ARFGAP2Q8N6H7 521 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 METTL22Q9BUU2 404 aaPredicted RBP9.26□□□□□ -0.93
CSMD1-213ENST00000523488 SERTAD1Q9UHV2 236 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 ABCA3Q99758 1704 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 TTC26A0AVF1 554 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 SPDYE3A6NKU9 549 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 CCT8L1PA6NM43 557 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 HPDP32754 393 aaPredicted RBP9.26□□□□□ -0.93
CSMD1-213ENST00000523488 ZBED6P86452 979 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 MYO1EQ12965 1108 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 IFI16Q16666 785 aaKnown RBP9.26□□□□□ -0.93
CSMD1-213ENST00000523488 C1QTNF12Q5T7M4 302 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 APBB1IPQ7Z5R6 666 aaPredicted RBP9.26□□□□□ -0.93
CSMD1-213ENST00000523488 RPUSD2Q8IZ73 545 aaKnown RBP9.26□□□□□ -0.93
CSMD1-213ENST00000523488 KLHL23Q8NBE8 558 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 NKX2-3Q8TAU0 364 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 TRAPPC9Q96Q05 1148 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 YIPF3Q9GZM5 350 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 WDR35Q9P2L0 1181 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 TRIM10Q9UDY6 481 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 SBF2Q86WG5 1849 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 TRAFD1O14545 582 aaPredicted RBP9.26□□□□□ -0.93
CSMD1-213ENST00000523488 PRC1O43663 620 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 KLRC4O43908 158 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 SEC24CP53992 1094 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 GRIN1Q05586 938 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 ZNF844Q08AG5 666 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 CUL1Q13616 776 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 ACVR2BQ13705 512 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 MAATS1Q7Z4T9 603 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 HOMEZQ8IX15 550 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 C4orf32Q8N8J7 132 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 FERMT2Q96AC1 680 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 EDC3Q96F86 508 aaKnown RBP9.26□□□□□ -0.93
CSMD1-213ENST00000523488 PHF24Q9UPV7 400 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 SIK3Q9Y2K2 1263 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 PCDHGA4Q9Y5G9 962 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 CAPN6Q9Y6Q1 641 aa9.26□□□□□ -0.93
CSMD1-213ENST00000523488 TAF1LQ8IZX4 1826 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 POTEFA5A3E0 1075 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 ZNF536O15090 1300 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 ECE2O60344 883 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 LUC7L3O95232 432 aaKnown RBP9.25□□□□□ -0.93
CSMD1-213ENST00000523488 POTEIP0CG38 1075 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 POTEJP0CG39 1038 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 KRT9P35527 623 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 KIF5AQ12840 1032 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 BNIP1Q12981 228 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 TTF1Q15361 905 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-213ENST00000523488 PPP1R7Q15435 360 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 KLHDC7AQ5VTJ3 777 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 DPY19L2P1Q6NXN4 242 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 POTEEQ6S8J3 1075 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 PNMA8AQ86V59 439 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-213ENST00000523488 DTNBP1Q96EV8 351 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 PGM2Q96G03 612 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 TMEM237Q96Q45 408 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 HYOU1Q9Y4L1 999 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 DCCP43146 1447 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 SSU72P8A0A1W2PR75 194 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 KRT86O43790 486 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 STRNO43815 780 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 PPFIA2O75334 1257 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 BMP15O95972 392 aa9.25□□□□□ -0.93
CSMD1-213ENST00000523488 RARAP10276 462 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms