RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 MYZAPP0CAP1 466 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 PRLRP16471 622 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 TTC39AQ5SRH9 613 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 PIGWQ7Z7B1 504 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 LCA5Q86VQ0 697 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 TRAPPC9Q96Q05 1148 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 EPB41L5Q9HCM4 733 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 ZNF609O15014 1411 aa13.25□□□□□ -0.29
SPIDR-217ENST00000522117 ATP6V1C1P21283 382 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 KRT83P78385 493 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 BEND3Q5T5X7 828 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 GALNT17Q6IS24 598 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 KLHL10Q6JEL2 608 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 OR2W6PQ8NHA6 318 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 NOC3LQ8WTT2 800 aaKnown RBP13.24□□□□□ -0.29
SPIDR-217ENST00000522117 CASKIN2Q8WXE0 1202 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 FGD4Q96M96 766 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 ZNF317Q96PQ6 595 aaPredicted RBP13.24□□□□□ -0.29
SPIDR-217ENST00000522117 TRIM7Q9C029 511 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.24□□□□□ -0.29
SPIDR-217ENST00000522117 LIMA1Q9UHB6 759 aaKnown RBP13.24□□□□□ -0.29
SPIDR-217ENST00000522117 SH2B2O14492 632 aaPredicted RBP13.24□□□□□ -0.29
SPIDR-217ENST00000522117 PARP1P09874 1014 aaKnown RBP13.24□□□□□ -0.29
SPIDR-217ENST00000522117 ZNF844Q08AG5 666 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 PABPC4Q13310 644 aaKnown RBP eCLIP13.24□□□□□ -0.29
SPIDR-217ENST00000522117 CHST3Q7LGC8 479 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 TRPM8Q7Z2W7 1104 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 CCDC155Q8N6L0 562 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 SLC35B4Q969S0 331 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 DNAJC7Q99615 494 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 MTRQ99707 1265 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 PHAXQ9H814 394 aaKnown RBP13.24□□□□□ -0.29
SPIDR-217ENST00000522117 DMAP1Q9NPF5 467 aaPredicted RBP13.24□□□□□ -0.29
SPIDR-217ENST00000522117 ABCF3Q9NUQ8 709 aa13.24□□□□□ -0.29
SPIDR-217ENST00000522117 MACROD2A1Z1Q3 448 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 FOXO3O43524 673 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 GUCY2DQ02846 1103 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 BIRC3Q13489 604 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 ENOX2Q16206 610 aaKnown RBP13.23□□□□□ -0.29
SPIDR-217ENST00000522117 ERMARDQ5T6L9 678 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 NFRKBQ6P4R8 1299 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 WHAMMQ8TF30 809 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 GPHNQ9NQX3 736 aaPredicted RBP13.23□□□□□ -0.29
SPIDR-217ENST00000522117 NKX1-2Q9UD57 310 aaPredicted RBP13.23□□□□□ -0.29
SPIDR-217ENST00000522117 ZMYND8Q9ULU4 1186 aaPredicted RBP13.23□□□□□ -0.29
SPIDR-217ENST00000522117 KAT6BQ8WYB5 2073 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 A0A0G2JLW4 131 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 TTC26A0AVF1 554 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 DCDC2CA8MYV0 355 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 ASAP2O43150 1006 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 ZNF189O75820 626 aaPredicted RBP13.23□□□□□ -0.29
SPIDR-217ENST00000522117 UBOX5O94941 541 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 HEXIM1O94992 359 aaKnown RBP13.23□□□□□ -0.29
SPIDR-217ENST00000522117 MBD4O95243 580 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 PCK1P35558 622 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 TRADDQ15628 312 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 UAP1Q16222 522 aaPredicted RBP13.23□□□□□ -0.29
SPIDR-217ENST00000522117 ZFYVE27Q5T4F4 411 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 ANKS4BQ8N8V4 417 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 VPS16Q9H269 839 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 ECT2Q9H8V3 914 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 DLGAP2Q9P1A6 1054 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 TSKSQ9UJT2 592 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 RABL2BQ9UNT1 228 aa13.23□□□□□ -0.29
SPIDR-217ENST00000522117 MYH7P12883 1935 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 TMEM221A6NGB7 291 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 POLR2DO15514 142 aaKnown RBP13.22□□□□□ -0.29
SPIDR-217ENST00000522117 HSD17B3P37058 310 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 COPB1P53618 953 aaKnown RBP13.22□□□□□ -0.29
SPIDR-217ENST00000522117 KLC1Q07866 573 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 SF3A3Q12874 501 aaKnown RBP eCLIP13.22□□□□□ -0.299e-19■■■■■ 36
SPIDR-217ENST00000522117 EIF4A2Q14240 407 aaKnown RBP13.22□□□□□ -0.29
SPIDR-217ENST00000522117 AGBL2Q5U5Z8 902 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 C17orf50Q8WW18 174 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 XPO6Q96QU8 1125 aaKnown RBP13.22□□□□□ -0.29
SPIDR-217ENST00000522117 FAM129AQ9BZQ8 928 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 TMCO1Q9UM00 188 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 RGPD8O14715 1765 aaPredicted RBP13.22□□□□□ -0.29
SPIDR-217ENST00000522117 ZNF142P52746 1687 aaPredicted RBP13.22□□□□□ -0.29
SPIDR-217ENST00000522117 WFS1O76024 890 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 CXCR5P32302 372 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 MSH2P43246 934 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 GRIN1Q05586 938 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 CACNA2D4Q7Z3S7 1137 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 FAM114A1Q8IWE2 563 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 KIF2BQ8N4N8 673 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 USHBP1Q8N6Y0 703 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 TAF4BQ92750 862 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 ARHGEF3Q9NR81 526 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 BZW2Q9Y6E2 419 aaKnown RBP13.22□□□□□ -0.29
SPIDR-217ENST00000522117 CAPN6Q9Y6Q1 641 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 MST1RQ04912 1400 aa13.22□□□□□ -0.29
SPIDR-217ENST00000522117 PPP1R3GB7ZBB8 358 aa13.21□□□□□ -0.29
SPIDR-217ENST00000522117 ACTN4O43707 911 aaKnown RBP13.21□□□□□ -0.29
SPIDR-217ENST00000522117 FAM200BP0CF97 657 aa13.21□□□□□ -0.29
SPIDR-217ENST00000522117 BPIFB4P59827 614 aa13.21□□□□□ -0.29
SPIDR-217ENST00000522117 DPYDQ12882 1025 aa13.21□□□□□ -0.29
SPIDR-217ENST00000522117 PLS1Q14651 629 aa13.21□□□□□ -0.29
SPIDR-217ENST00000522117 GALNTL6Q49A17 601 aa13.21□□□□□ -0.29
SPIDR-217ENST00000522117 VPS37DQ86XT2 251 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms