RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 XAGE3Q8WTP9 111 aa4.69□□□□□ -1.66
PVT1-211ENST00000521600 PMEPA1Q969W9 287 aa4.69□□□□□ -1.66
PVT1-211ENST00000521600 OPTNQ96CV9 577 aa4.69□□□□□ -1.66
PVT1-211ENST00000521600 PAWRQ96IZ0 340 aaKnown RBP4.69□□□□□ -1.66
PVT1-211ENST00000521600 FRMD6Q96NE9 622 aa4.69□□□□□ -1.66
PVT1-211ENST00000521600 TRERF1Q96PN7 1200 aa4.69□□□□□ -1.66
PVT1-211ENST00000521600 EYA3Q99504 573 aa4.69□□□□□ -1.66
PVT1-211ENST00000521600 CDX2Q99626 313 aaPredicted RBP4.69□□□□□ -1.66
PVT1-211ENST00000521600 ZC3H12CQ9C0D7 883 aaKnown RBP4.69□□□□□ -1.66
PVT1-211ENST00000521600 BICC1Q9H694 974 aaKnown RBP4.69□□□□□ -1.66
PVT1-211ENST00000521600 SRRDQ9UH36 339 aa4.69□□□□□ -1.66
PVT1-211ENST00000521600 TRMT112Q9UI30 125 aaKnown RBP4.69□□□□□ -1.66
PVT1-211ENST00000521600 PHF24Q9UPV7 400 aa4.69□□□□□ -1.66
PVT1-211ENST00000521600 RIPOR2Q9Y4F9 1068 aa4.69□□□□□ -1.66
PVT1-211ENST00000521600 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.69□□□□□ -1.66
PVT1-211ENST00000521600 RFX7Q2KHR2 1363 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 CCL15-CCL14A0A0B4J2E2 113 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 TLR2O60603 784 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 BAG4O95429 457 aaKnown RBP4.68□□□□□ -1.66
PVT1-211ENST00000521600 IGKV5-2P06315 115 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 PSAPP07602 524 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 ZKSCAN1P17029 563 aaPredicted RBP4.68□□□□□ -1.66
PVT1-211ENST00000521600 MRE11P49959 708 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 CTBSQ01459 385 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 CUL4AQ13619 759 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 CCL15Q16663 113 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 KLHL40Q2TBA0 621 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 CWF19L2Q2TBE0 894 aaKnown RBP4.68□□□□□ -1.66
PVT1-211ENST00000521600 NBPF12Q5TAG4 269 aaPredicted RBP4.68□□□□□ -1.66
PVT1-211ENST00000521600 TSHZ3Q63HK5 1081 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 OTUD7BQ6GQQ9 843 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 FAM109BQ6ICB4 259 aaPredicted RBP4.68□□□□□ -1.66
PVT1-211ENST00000521600 SV2AQ7L0J3 742 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 COPS6Q7L5N1 327 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 AACSQ86V21 672 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 APOBEC3FQ8IUX4 373 aaKnown RBP4.68□□□□□ -1.66
PVT1-211ENST00000521600 VWA5B2Q8N398 1253 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 MYLIPQ8WY64 445 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 SUCLG2Q96I99 432 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 TMX3Q96JJ7 454 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 MYD88Q99836 296 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 OSBPL7Q9BZF2 842 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 UBE2OQ9C0C9 1292 aaKnown RBP4.68□□□□□ -1.66
PVT1-211ENST00000521600 DEFB129Q9H1M3 183 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 C12orf49Q9H741 205 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 COPRSQ9NQ92 184 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 LATS2Q9NRM7 1088 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 GBF1Q92538 1859 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 MYPNQ86TC9 1320 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 SH3TC1Q8TE82 1336 aa4.68□□□□□ -1.66
PVT1-211ENST00000521600 C5orf42Q9H799 3197 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 FSD2A1L4K1 749 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 SCAMP3O14828 347 aaKnown RBP4.67□□□□□ -1.66
PVT1-211ENST00000521600 CTSHP09668 335 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 PSMA5P28066 241 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 PSMC4P43686 418 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 PRMT2P55345 433 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 PRKCZQ05513 592 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 ARHGEF6Q15052 776 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 SF3B3Q15393 1217 aaKnown RBP4.67□□□□□ -1.66
PVT1-211ENST00000521600 LRRFIP1Q32MZ4 808 aaKnown RBP4.67□□□□□ -1.66
PVT1-211ENST00000521600 RABL6Q3YEC7 729 aaPredicted RBP4.67□□□□□ -1.66
PVT1-211ENST00000521600 HSP90AB3PQ58FF7 597 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 FOXR1Q6PIV2 292 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 NXPE4Q6UWF7 544 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 C17orf99Q6UX52 265 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 DHX32Q7L7V1 743 aaKnown RBP4.67□□□□□ -1.66
PVT1-211ENST00000521600 NCAPG2Q86XI2 1143 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 CCDC191Q8NCU4 936 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 RAET1EQ8TD07 263 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 ANP32BQ92688 251 aaKnown RBP4.67□□□□□ -1.66
PVT1-211ENST00000521600 ZSCAN31Q96LW9 406 aaPredicted RBP4.67□□□□□ -1.66
PVT1-211ENST00000521600 NSUN5Q96P11 429 aaKnown RBP4.67□□□□□ -1.66
PVT1-211ENST00000521600 DEFB118Q96PH6 123 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 BCO2Q9BYV7 579 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 TM6SF1Q9BZW5 370 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 LSG1Q9H089 658 aaKnown RBP4.67□□□□□ -1.66
PVT1-211ENST00000521600 EHD4Q9H223 541 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 IGFLR1Q9H665 355 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 SEC31BQ9NQW1 1179 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 CWC25Q9NXE8 425 aaPredicted RBP4.67□□□□□ -1.66
PVT1-211ENST00000521600 TLR7Q9NYK1 1049 aaKnown RBP4.67□□□□□ -1.66
PVT1-211ENST00000521600 CPA4Q9UI42 421 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 SALL4Q9UJQ4 1053 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 PRR12Q9ULL5 1215 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 GABRQQ9UN88 632 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.67□□□□□ -1.66
PVT1-211ENST00000521600 DDX49Q9Y6V7 483 aaKnown RBP4.67□□□□□ -1.66
PVT1-211ENST00000521600 RLFQ13129 1914 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 ADGRA2Q96PE1 1338 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 PHIPQ8WWQ0 1821 aa4.67□□□□□ -1.66
PVT1-211ENST00000521600 PLXNA1Q9UIW2 1896 aa4.66□□□□□ -1.66
PVT1-211ENST00000521600 DCHS1Q96JQ0 3298 aa4.66□□□□□ -1.66
PVT1-211ENST00000521600 CLRN2A0PK11 232 aa4.66□□□□□ -1.66
PVT1-211ENST00000521600 BTBD19C9JJ37 291 aa4.66□□□□□ -1.66
PVT1-211ENST00000521600 GIPC1O14908 333 aa4.66□□□□□ -1.66
PVT1-211ENST00000521600 MAP4K4O95819 1239 aaPredicted RBP4.66□□□□□ -1.66
PVT1-211ENST00000521600 MBD3O95983 291 aa4.66□□□□□ -1.66
PVT1-211ENST00000521600 TFRCP02786 760 aaKnown RBP4.66□□□□□ -1.66
PVT1-211ENST00000521600 USP17L7P0C7H9 530 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms