RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 TMEM67Q5HYA8 995 aa30.14■■■□□ 2.42
LAPTM4B-203ENST00000521545 ARHGEF16Q5VV41 709 aa30.14■■■□□ 2.42
LAPTM4B-203ENST00000521545 CHST3Q7LGC8 479 aa30.14■■■□□ 2.42
LAPTM4B-203ENST00000521545 MTMR8Q96EF0 704 aa30.14■■■□□ 2.42
LAPTM4B-203ENST00000521545 FAM161BQ96MY7 647 aa30.14■■■□□ 2.42
LAPTM4B-203ENST00000521545 MTG1Q9BT17 334 aaPredicted RBP30.14■■■□□ 2.42
LAPTM4B-203ENST00000521545 HIPK3Q9H422 1215 aa30.14■■■□□ 2.42
LAPTM4B-203ENST00000521545 TAF6LQ9Y6J9 622 aa30.14■■■□□ 2.42
LAPTM4B-203ENST00000521545 LAMA2P24043 3122 aaKnown RBP30.14■■■□□ 2.42
LAPTM4B-203ENST00000521545 KPNA6O60684 536 aa30.13■■■□□ 2.41
LAPTM4B-203ENST00000521545 CSF2RAP15509 400 aa30.13■■■□□ 2.41
LAPTM4B-203ENST00000521545 CYP2C18P33260 490 aa30.13■■■□□ 2.41
LAPTM4B-203ENST00000521545 PURAQ00577 322 aaKnown RBP30.13■■■□□ 2.41
LAPTM4B-203ENST00000521545 STOX1Q6ZVD7 989 aa30.13■■■□□ 2.41
LAPTM4B-203ENST00000521545 CATIPQ7Z7H3 387 aa30.13■■■□□ 2.41
LAPTM4B-203ENST00000521545 COPS5Q92905 334 aa30.13■■■□□ 2.41
LAPTM4B-203ENST00000521545 TRPV6Q9H1D0 765 aa30.13■■■□□ 2.41
LAPTM4B-203ENST00000521545 COL20A1Q9P218 1284 aa30.13■■■□□ 2.41
LAPTM4B-203ENST00000521545 PCDHA1Q9Y5I3 950 aa30.13■■■□□ 2.41
LAPTM4B-203ENST00000521545 SEPT14Q6ZU15 432 aa30.12■■■□□ 2.41
LAPTM4B-203ENST00000521545 SLC17A8Q8NDX2 589 aa30.12■■■□□ 2.41
LAPTM4B-203ENST00000521545 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.12■■■□□ 2.41
LAPTM4B-203ENST00000521545 A6NJR5 290 aa30.11■■■□□ 2.41
LAPTM4B-203ENST00000521545 B4GALT4O60513 344 aa30.11■■■□□ 2.41
LAPTM4B-203ENST00000521545 HOMER1Q86YM7 354 aa30.11■■■□□ 2.41
LAPTM4B-203ENST00000521545 ALDH8A1Q9H2A2 487 aaPredicted RBP30.11■■■□□ 2.41
LAPTM4B-203ENST00000521545 SENP2Q9HC62 589 aa30.11■■■□□ 2.41
LAPTM4B-203ENST00000521545 MAP3K20Q9NYL2 800 aaKnown RBP30.11■■■□□ 2.41
LAPTM4B-203ENST00000521545 HSFX4A0A1B0GTS1 333 aaPredicted RBP30.1■■■□□ 2.41
LAPTM4B-203ENST00000521545 HSFX3A0A1B0GWH4 333 aaPredicted RBP30.1■■■□□ 2.41
LAPTM4B-203ENST00000521545 SUPT20HL2P0C7V6 817 aa30.1■■■□□ 2.41
LAPTM4B-203ENST00000521545 EIF2AK2P19525 551 aaKnown RBP30.1■■■□□ 2.41
LAPTM4B-203ENST00000521545 HSD17B4P51659 736 aa30.1■■■□□ 2.41
LAPTM4B-203ENST00000521545 TMEM240Q5SV17 173 aa30.1■■■□□ 2.41
LAPTM4B-203ENST00000521545 CASC1Q6TDU7 716 aa30.1■■■□□ 2.41
LAPTM4B-203ENST00000521545 SAMD3Q8N6K7 520 aa30.1■■■□□ 2.41
LAPTM4B-203ENST00000521545 RIOX1Q9H6W3 641 aa30.1■■■□□ 2.41
LAPTM4B-203ENST00000521545 ARIH2O95376 493 aa30.09■■■□□ 2.41
LAPTM4B-203ENST00000521545 TROAPQ12815 778 aa30.09■■■□□ 2.41
LAPTM4B-203ENST00000521545 CCDC62Q6P9F0 684 aa30.09■■■□□ 2.41
LAPTM4B-203ENST00000521545 PSRC1Q6PGN9 363 aaPredicted RBP30.09■■■□□ 2.41
LAPTM4B-203ENST00000521545 MB21D2Q8IYB1 491 aaPredicted RBP30.09■■■□□ 2.41
LAPTM4B-203ENST00000521545 IGDCC4Q8TDY8 1250 aa30.09■■■□□ 2.41
LAPTM4B-203ENST00000521545 PIGSQ96S52 555 aa30.09■■■□□ 2.41
LAPTM4B-203ENST00000521545 PXMP2Q9NR77 195 aa30.09■■■□□ 2.41
LAPTM4B-203ENST00000521545 PPP1R11O60927 126 aaPredicted RBP30.08■■■□□ 2.41
LAPTM4B-203ENST00000521545 EIF3JO75822 258 aaKnown RBP30.08■■■□□ 2.41
LAPTM4B-203ENST00000521545 GH1P01241 217 aa30.08■■■□□ 2.41
LAPTM4B-203ENST00000521545 NR3C2P08235 984 aa30.08■■■□□ 2.41
LAPTM4B-203ENST00000521545 ACRP10323 421 aa30.08■■■□□ 2.41
LAPTM4B-203ENST00000521545 ANTXR2P58335 489 aa30.08■■■□□ 2.41
LAPTM4B-203ENST00000521545 LY6KQ17RY6 165 aa30.08■■■□□ 2.41
LAPTM4B-203ENST00000521545 C16orf59Q7L2K0 433 aa30.08■■■□□ 2.41
LAPTM4B-203ENST00000521545 GUCD1Q96NT3 240 aa30.08■■■□□ 2.41
LAPTM4B-203ENST00000521545 ESYT1Q9BSJ8 1104 aa30.08■■■□□ 2.41
LAPTM4B-203ENST00000521545 NOC4LQ9BVI4 516 aaKnown RBP30.08■■■□□ 2.41
LAPTM4B-203ENST00000521545 SEMA6BQ9H3T3 888 aa30.08■■■□□ 2.41
LAPTM4B-203ENST00000521545 IL23AQ9NPF7 189 aa30.08■■■□□ 2.41
LAPTM4B-203ENST00000521545 OPLAHO14841 1288 aa30.07■■■□□ 2.4
LAPTM4B-203ENST00000521545 NBPF20Q3BBV1 942 aa30.07■■■□□ 2.4
LAPTM4B-203ENST00000521545 FAM47CQ5HY64 1035 aa30.07■■■□□ 2.4
LAPTM4B-203ENST00000521545 ZNF365Q70YC5 407 aa30.07■■■□□ 2.4
LAPTM4B-203ENST00000521545 CENPQQ7L2Z9 268 aaPredicted RBP30.07■■■□□ 2.4
LAPTM4B-203ENST00000521545 LSG1Q9H089 658 aaKnown RBP30.07■■■□□ 2.4
LAPTM4B-203ENST00000521545 PNMA6FA0A0J9YX94 578 aa30.06■■■□□ 2.4
LAPTM4B-203ENST00000521545 GHRHRQ02643 423 aa30.06■■■□□ 2.4
LAPTM4B-203ENST00000521545 MTA3Q9BTC8 594 aa30.06■■■□□ 2.4
LAPTM4B-203ENST00000521545 UMODL1Q5DID0 1318 aa30.05■■■□□ 2.4
LAPTM4B-203ENST00000521545 MCM5P33992 734 aa30.05■■■□□ 2.4
LAPTM4B-203ENST00000521545 CCL23P55773 120 aa30.05■■■□□ 2.4
LAPTM4B-203ENST00000521545 SLC35G1Q2M3R5 365 aa30.05■■■□□ 2.4
LAPTM4B-203ENST00000521545 NFRKBQ6P4R8 1299 aa30.05■■■□□ 2.4
LAPTM4B-203ENST00000521545 TMTC2Q8N394 836 aa30.05■■■□□ 2.4
LAPTM4B-203ENST00000521545 CTCFLQ8NI51 663 aaPredicted RBP30.05■■■□□ 2.4
LAPTM4B-203ENST00000521545 AFG1LQ8WV93 481 aa30.05■■■□□ 2.4
LAPTM4B-203ENST00000521545 MAP3K14Q99558 947 aa30.05■■■□□ 2.4
LAPTM4B-203ENST00000521545 MTIF3Q9H2K0 278 aaKnown RBP30.05■■■□□ 2.4
LAPTM4B-203ENST00000521545 TRMT13Q9NUP7 481 aaKnown RBP30.05■■■□□ 2.4
LAPTM4B-203ENST00000521545 COL6A3P12111 3177 aa30.05■■■□□ 2.4
LAPTM4B-203ENST00000521545 TMEM265A0A087WTH1 108 aa30.04■■■□□ 2.4
LAPTM4B-203ENST00000521545 GCOM1H8Y6P7 765 aaPredicted RBP30.04■■■□□ 2.4
LAPTM4B-203ENST00000521545 PRC1O43663 620 aa30.04■■■□□ 2.4
LAPTM4B-203ENST00000521545 CYTH3O43739 400 aa30.04■■■□□ 2.4
LAPTM4B-203ENST00000521545 FGBP02675 491 aa30.04■■■□□ 2.4
LAPTM4B-203ENST00000521545 POLR2MP0CAP2 368 aa30.04■■■□□ 2.4
LAPTM4B-203ENST00000521545 MYCLP12524 364 aaPredicted RBP30.04■■■□□ 2.4
LAPTM4B-203ENST00000521545 HOXA13P31271 388 aaPredicted RBP30.04■■■□□ 2.4
LAPTM4B-203ENST00000521545 ZNF654Q8IZM8 581 aa30.04■■■□□ 2.4
LAPTM4B-203ENST00000521545 LY9Q9HBG7 655 aa30.04■■■□□ 2.4
LAPTM4B-203ENST00000521545 ANO2Q9NQ90 1003 aa30.04■■■□□ 2.4
LAPTM4B-203ENST00000521545 MRVI1Q9Y6F6 885 aa30.04■■■□□ 2.4
LAPTM4B-203ENST00000521545 SLC27A2O14975 620 aa30.03■■■□□ 2.4
LAPTM4B-203ENST00000521545 KIF5BP33176 963 aa30.03■■■□□ 2.4
LAPTM4B-203ENST00000521545 CHMP4BP1P59074 171 aa30.03■■■□□ 2.4
LAPTM4B-203ENST00000521545 PTPN11Q06124 597 aaPredicted RBP30.03■■■□□ 2.4
LAPTM4B-203ENST00000521545 ARHGAP1Q07960 439 aa30.03■■■□□ 2.4
LAPTM4B-203ENST00000521545 NFXL1Q6ZNB6 911 aa30.03■■■□□ 2.4
LAPTM4B-203ENST00000521545 RPUSD2Q8IZ73 545 aaKnown RBP30.03■■■□□ 2.4
LAPTM4B-203ENST00000521545 PDCD2LQ9BRP1 358 aa30.03■■■□□ 2.4
LAPTM4B-203ENST00000521545 DDX41Q9UJV9 622 aaKnown RBP30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms