RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 MUC3AQ02505 3323 aa17.47■□□□□ 0.39
PRKDC-204ENST00000521331 PITPNM1O00562 1244 aa17.46■□□□□ 0.39
PRKDC-204ENST00000521331 TTLL4Q14679 1199 aa17.46■□□□□ 0.39
PRKDC-204ENST00000521331 DEFB128Q7Z7B8 93 aa17.46■□□□□ 0.39
PRKDC-204ENST00000521331 RETREG2Q8NC44 543 aa17.46■□□□□ 0.39
PRKDC-204ENST00000521331 IL27Q8NEV9 243 aa17.46■□□□□ 0.39
PRKDC-204ENST00000521331 LCTP09848 1927 aa17.46■□□□□ 0.39
PRKDC-204ENST00000521331 MYO9BQ13459 2157 aa17.46■□□□□ 0.39
PRKDC-204ENST00000521331 TRIM6-TRIM34B2RNG4 842 aa17.45■□□□□ 0.38
PRKDC-204ENST00000521331 TXNP10599 105 aaKnown RBP17.45■□□□□ 0.38
PRKDC-204ENST00000521331 CCDC178Q5BJE1 867 aa17.45■□□□□ 0.38
PRKDC-204ENST00000521331 TMEM67Q5HYA8 995 aa17.45■□□□□ 0.38
PRKDC-204ENST00000521331 DGKHQ86XP1 1220 aa17.45■□□□□ 0.38
PRKDC-204ENST00000521331 TBC1D10CQ8IV04 446 aa17.45■□□□□ 0.38
PRKDC-204ENST00000521331 SLC9A7Q96T83 725 aa17.45■□□□□ 0.38
PRKDC-204ENST00000521331 MYOGP15173 224 aa17.44■□□□□ 0.38
PRKDC-204ENST00000521331 BFSP2Q13515 415 aa17.44■□□□□ 0.38
PRKDC-204ENST00000521331 USH1GQ495M9 461 aa17.44■□□□□ 0.38
PRKDC-204ENST00000521331 IQCA1Q86XH1 822 aa17.44■□□□□ 0.38
PRKDC-204ENST00000521331 PHOSPHO2Q8TCD6 241 aa17.44■□□□□ 0.38
PRKDC-204ENST00000521331 ADAMTS19Q8TE59 1207 aa17.44■□□□□ 0.38
PRKDC-204ENST00000521331 CRBNQ96SW2 442 aa17.44■□□□□ 0.38
PRKDC-204ENST00000521331 NOD1Q9Y239 953 aa17.44■□□□□ 0.38
PRKDC-204ENST00000521331 IQCF3P0C7M6 154 aa17.43■□□□□ 0.38
PRKDC-204ENST00000521331 CCDC155Q8N6L0 562 aa17.43■□□□□ 0.38
PRKDC-204ENST00000521331 COPS5Q92905 334 aa17.43■□□□□ 0.38
PRKDC-204ENST00000521331 RILPL2Q969X0 211 aa17.43■□□□□ 0.38
PRKDC-204ENST00000521331 UHRF1Q96T88 793 aaPredicted RBP17.43■□□□□ 0.38
PRKDC-204ENST00000521331 ABCB11O95342 1321 aa17.43■□□□□ 0.38
PRKDC-204ENST00000521331 NEDD4P46934 1319 aa17.43■□□□□ 0.38
PRKDC-204ENST00000521331 ZNF213O14771 459 aa17.42■□□□□ 0.38
PRKDC-204ENST00000521331 CA3P07451 260 aa17.42■□□□□ 0.38
PRKDC-204ENST00000521331 GOLGA8HP0CJ92 632 aa17.42■□□□□ 0.38
PRKDC-204ENST00000521331 CDC37Q16543 378 aaPredicted RBP17.42■□□□□ 0.38
PRKDC-204ENST00000521331 CCDC62Q6P9F0 684 aa17.42■□□□□ 0.38
PRKDC-204ENST00000521331 MCF2L2Q86YR7 1114 aa17.42■□□□□ 0.38
PRKDC-204ENST00000521331 PNMA1Q8ND90 353 aa17.42■□□□□ 0.38
PRKDC-204ENST00000521331 FTOQ9C0B1 505 aaKnown RBP eCLIP17.42■□□□□ 0.38
PRKDC-204ENST00000521331 LNPKQ9C0E8 428 aa17.42■□□□□ 0.38
PRKDC-204ENST00000521331 UBA5Q9GZZ9 404 aa17.42■□□□□ 0.38
PRKDC-204ENST00000521331 KAT14Q9H8E8 782 aa17.42■□□□□ 0.38
PRKDC-204ENST00000521331 NCOR1O75376 2440 aa17.42■□□□□ 0.38
PRKDC-204ENST00000521331 SCN10AQ9Y5Y9 1956 aa17.42■□□□□ 0.38
PRKDC-204ENST00000521331 KIF28PB7ZC32 967 aa17.41■□□□□ 0.38
PRKDC-204ENST00000521331 GTPBP6O43824 516 aaPredicted RBP17.41■□□□□ 0.38
PRKDC-204ENST00000521331 BAIAP3O94812 1187 aa17.41■□□□□ 0.38
PRKDC-204ENST00000521331 ARIH2O95376 493 aa17.41■□□□□ 0.38
PRKDC-204ENST00000521331 GH1P01241 217 aa17.41■□□□□ 0.38
PRKDC-204ENST00000521331 SDSP20132 328 aa17.41■□□□□ 0.38
PRKDC-204ENST00000521331 POU3F3P20264 500 aaPredicted RBP17.41■□□□□ 0.38
PRKDC-204ENST00000521331 AAMPQ13685 434 aa17.41■□□□□ 0.38
PRKDC-204ENST00000521331 AAK1Q2M2I8 961 aa17.41■□□□□ 0.38
PRKDC-204ENST00000521331 ASPRV1Q53RT3 343 aa17.41■□□□□ 0.38
PRKDC-204ENST00000521331 MICALL1Q8N3F8 863 aa17.41■□□□□ 0.38
PRKDC-204ENST00000521331 CAGE1Q8TC20 777 aa17.41■□□□□ 0.38
PRKDC-204ENST00000521331 NSUN6Q8TEA1 469 aaKnown RBP17.41■□□□□ 0.38
PRKDC-204ENST00000521331 IWS1Q96ST2 819 aa17.41■□□□□ 0.38
PRKDC-204ENST00000521331 ZKSCAN3Q9BRR0 538 aa17.41■□□□□ 0.38
PRKDC-204ENST00000521331 CHD7Q9P2D1 2997 aa17.4■□□□□ 0.38
PRKDC-204ENST00000521331 MMP3P08254 477 aa17.4■□□□□ 0.38
PRKDC-204ENST00000521331 STXBP2Q15833 593 aa17.4■□□□□ 0.38
PRKDC-204ENST00000521331 PTGISQ16647 500 aa17.4■□□□□ 0.38
PRKDC-204ENST00000521331 SESTD1Q86VW0 696 aa17.4■□□□□ 0.38
PRKDC-204ENST00000521331 ADGRF4Q8IZF3 695 aa17.4■□□□□ 0.38
PRKDC-204ENST00000521331 SYTL5Q8TDW5 730 aaPredicted RBP17.4■□□□□ 0.38
PRKDC-204ENST00000521331 AFAP1L1Q8TED9 768 aa17.4■□□□□ 0.38
PRKDC-204ENST00000521331 AFG1LQ8WV93 481 aa17.4■□□□□ 0.38
PRKDC-204ENST00000521331 ANKS1AQ92625 1134 aa17.4■□□□□ 0.38
PRKDC-204ENST00000521331 KDM4AO75164 1064 aa17.39■□□□□ 0.37
PRKDC-204ENST00000521331 CASTP20810 708 aaKnown RBP17.39■□□□□ 0.37
PRKDC-204ENST00000521331 CHMP4BP1P59074 171 aa17.39■□□□□ 0.37
PRKDC-204ENST00000521331 ARHGAP1Q07960 439 aa17.39■□□□□ 0.37
PRKDC-204ENST00000521331 LY6KQ17RY6 165 aa17.39■□□□□ 0.37
PRKDC-204ENST00000521331 SEPT14Q6ZU15 432 aa17.39■□□□□ 0.37
PRKDC-204ENST00000521331 HERC6Q8IVU3 1022 aa17.39■□□□□ 0.37
PRKDC-204ENST00000521331 PPP1R13LQ8WUF5 828 aa17.39■□□□□ 0.37
PRKDC-204ENST00000521331 TAAR1Q96RJ0 339 aa17.39■□□□□ 0.37
PRKDC-204ENST00000521331 ZSCAN10Q96SZ4 725 aaPredicted RBP17.39■□□□□ 0.37
PRKDC-204ENST00000521331 RMDN3Q96TC7 470 aa17.39■□□□□ 0.37
PRKDC-204ENST00000521331 CPVLQ9H3G5 476 aa17.39■□□□□ 0.37
PRKDC-204ENST00000521331 MRPL11Q9Y3B7 192 aaKnown RBP17.39■□□□□ 0.37
PRKDC-204ENST00000521331 MTCH2Q9Y6C9 303 aa17.39■□□□□ 0.37
PRKDC-204ENST00000521331 BDP1A6H8Y1 2624 aa17.38■□□□□ 0.37
PRKDC-204ENST00000521331 PARNO95453 639 aaKnown RBP17.38■□□□□ 0.37
PRKDC-204ENST00000521331 KCNJ6P48051 423 aa17.38■□□□□ 0.37
PRKDC-204ENST00000521331 SKIV2LQ15477 1246 aaKnown RBP17.38■□□□□ 0.37
PRKDC-204ENST00000521331 DGKDQ16760 1214 aa17.38■□□□□ 0.37
PRKDC-204ENST00000521331 FBXO11Q86XK2 927 aa17.38■□□□□ 0.37
PRKDC-204ENST00000521331 SMC5Q8IY18 1101 aa17.38■□□□□ 0.37
PRKDC-204ENST00000521331 RWDD1Q9H446 243 aaPredicted RBP17.38■□□□□ 0.37
PRKDC-204ENST00000521331 OSBPL3Q9H4L5 887 aa17.38■□□□□ 0.37
PRKDC-204ENST00000521331 DIAPH3Q9NSV4 1193 aa17.38■□□□□ 0.37
PRKDC-204ENST00000521331 HIP1O00291 1037 aa17.37■□□□□ 0.37
PRKDC-204ENST00000521331 DHX16O60231 1041 aaKnown RBP17.37■□□□□ 0.37
PRKDC-204ENST00000521331 PARP1P09874 1014 aaKnown RBP17.37■□□□□ 0.37
PRKDC-204ENST00000521331 SELPP16109 830 aa17.37■□□□□ 0.37
PRKDC-204ENST00000521331 COL9A1P20849 921 aa17.37■□□□□ 0.37
PRKDC-204ENST00000521331 TAP1Q03518 808 aa17.37■□□□□ 0.37
PRKDC-204ENST00000521331 RBL2Q08999 1139 aa17.37■□□□□ 0.37
PRKDC-204ENST00000521331 QRICH1Q2TAL8 776 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms