RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 MRPS23Q9Y3D9 190 aaKnown RBP6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 CSADQ9Y600 493 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 DAPK1P53355 1430 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 ANKARQ7Z5J8 1434 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 BRCA1P38398 1863 aaKnown RBP6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 KIF13BQ9NQT8 1826 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 CPDO75976 1380 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 KIAA1551Q9HCM1 1747 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 A0A1W2PQU0 124 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 OIP5O43482 229 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 NPTXRO95502 500 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 CST3P01034 146 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 CTSBP07858 339 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 AKAP4Q5JQC9 854 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 SMG8Q8ND04 991 aaKnown RBP6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 KISS1RQ969F8 398 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 BTBD6Q96KE9 485 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 CCDC140Q96MF4 163 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 FANCD2OSQ96PS1 177 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 TMPRSS13Q9BYE2 586 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 SSU72Q9NP77 194 aaKnown RBP6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 GEMIN8Q9NWZ8 242 aaKnown RBP6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 PIM2Q9P1W9 311 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 TCEAL9Q9UHQ7 104 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 THSD7BQ9C0I4 1608 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 CACNA1GO43497 2377 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 USP54Q70EL1 1684 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 UNC80Q8N2C7 3258 aa6.23□□□□□ -1.41
HMGB1P23-201ENST00000518743 ABCC6O95255 1503 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 A0A087WZG4 1122 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 FAM86C2PA6NEL3 165 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 PDE8AO60658 829 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 LRIG2O94898 1065 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 MMP10P09238 476 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 ITGA4P13612 1032 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 NAT1P18440 290 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 FLT3P36888 993 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 NFKB2Q00653 900 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 ODR4Q5SWX8 454 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 TRAPPC3LQ5T215 181 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 ADAT2Q7Z6V5 191 aaKnown RBP6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 LDHDQ86WU2 507 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 FBXO11Q86XK2 927 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 THNSL2Q86YJ6 484 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 DMRTC2Q8IXT2 367 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 GALNT11Q8NCW6 608 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 LRRN4CLQ8ND94 238 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 BVESQ8NE79 360 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 RCC1LQ96I51 464 aaKnown RBP6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 FOXQ1Q9C009 403 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 MKRN2Q9H000 416 aaKnown RBP6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 PRR13Q9NZ81 148 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 CHPF2Q9P2E5 772 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 RAPGEFL1Q9UHV5 662 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 AP4E1Q9UPM8 1137 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 SUGT1Q9Y2Z0 365 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 C5P01031 1676 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 ANKRD50Q9ULJ7 1429 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 WDR17Q8IZU2 1322 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 LY75O60449 1722 aa6.22□□□□□ -1.41
HMGB1P23-201ENST00000518743 TM4SF5O14894 197 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 EPHX1P07099 455 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 BCRP11274 1271 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 ADH5P11766 374 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 NID1P14543 1247 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 ETV3P41162 512 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 PPP2R2AP63151 447 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 FOXD4L6Q3SYB3 417 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 ANKRD34AQ69YU3 496 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 TMEM132EQ6IEE7 984 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 FOXD4L3Q6VB84 417 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 NSMFQ6X4W1 530 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 DHX37Q8IY37 1157 aaKnown RBP6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 TMEM192Q8IY95 271 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 RELTQ969Z4 430 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 PPP1R14AQ96A00 147 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 ACDQ96AP0 544 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 DCAF5Q96JK2 942 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 YIPF2Q9BWQ6 316 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 KLHL25Q9H0H3 589 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 MRPL18Q9H0U6 180 aaKnown RBP6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 ARHGEF4Q9NR80 690 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 DISC1Q9NRI5 854 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 ENAMQ9NRM1 1142 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 SFMBT1Q9UHJ3 866 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 PCOLCE2Q9UKZ9 415 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 PPLO60437 1756 aa6.21□□□□□ -1.42
HMGB1P23-201ENST00000518743 QRICH2Q9H0J4 1663 aa6.2□□□□□ -1.42
HMGB1P23-201ENST00000518743 IRS4O14654 1257 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P23-201ENST00000518743 ADAM11O75078 769 aa6.2□□□□□ -1.42
HMGB1P23-201ENST00000518743 UBOX5O94941 541 aa6.2□□□□□ -1.42
HMGB1P23-201ENST00000518743 PARNO95453 639 aaKnown RBP6.2□□□□□ -1.42
HMGB1P23-201ENST00000518743 TP53P04637 393 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P23-201ENST00000518743 POLR2BP30876 1174 aaKnown RBP6.2□□□□□ -1.42
HMGB1P23-201ENST00000518743 GABREP78334 506 aa6.2□□□□□ -1.42
HMGB1P23-201ENST00000518743 RBM10P98175 930 aaKnown RBP6.2□□□□□ -1.42
HMGB1P23-201ENST00000518743 SOX4Q06945 474 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P23-201ENST00000518743 TRIM61Q5EBN2 209 aa6.2□□□□□ -1.42
HMGB1P23-201ENST00000518743 FDX2Q6P4F2 183 aa6.2□□□□□ -1.42
HMGB1P23-201ENST00000518743 DDX46Q7L014 1031 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms