RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 TAAR1Q96RJ0 339 aa22.62■■□□□ 1.21
CCHCR1-230ENST00000513222 A6NJR5 290 aa22.61■■□□□ 1.21
CCHCR1-230ENST00000513222 DDAH1O94760 285 aa22.61■■□□□ 1.21
CCHCR1-230ENST00000513222 CXCL17Q6UXB2 119 aa22.61■■□□□ 1.21
CCHCR1-230ENST00000513222 NOL8Q76FK4 1167 aaKnown RBP22.61■■□□□ 1.21
CCHCR1-230ENST00000513222 CHST3Q7LGC8 479 aa22.61■■□□□ 1.21
CCHCR1-230ENST00000513222 SPZ1Q9BXG8 430 aa22.61■■□□□ 1.21
CCHCR1-230ENST00000513222 PRDM5Q9NQX1 630 aaPredicted RBP22.61■■□□□ 1.21
CCHCR1-230ENST00000513222 TMEM39AQ9NV64 488 aa22.61■■□□□ 1.21
CCHCR1-230ENST00000513222 PCDHA1Q9Y5I3 950 aa22.61■■□□□ 1.21
CCHCR1-230ENST00000513222 MYH7BA7E2Y1 1941 aa22.61■■□□□ 1.21
CCHCR1-230ENST00000513222 PNMA6FA0A0J9YX94 578 aa22.6■■□□□ 1.21
CCHCR1-230ENST00000513222 TIMP1P01033 207 aa22.6■■□□□ 1.21
CCHCR1-230ENST00000513222 PTGS1P23219 599 aa22.6■■□□□ 1.21
CCHCR1-230ENST00000513222 COL9A3Q14050 684 aaPredicted RBP22.6■■□□□ 1.21
CCHCR1-230ENST00000513222 SKAP1Q86WV1 359 aa22.6■■□□□ 1.21
CCHCR1-230ENST00000513222 RMDN3Q96TC7 470 aa22.6■■□□□ 1.21
CCHCR1-230ENST00000513222 DHX16O60231 1041 aaKnown RBP22.59■■□□□ 1.21
CCHCR1-230ENST00000513222 RAG1P15918 1043 aa22.59■■□□□ 1.21
CCHCR1-230ENST00000513222 CPT1AP50416 773 aa22.59■■□□□ 1.21
CCHCR1-230ENST00000513222 ITGA7Q13683 1181 aa22.59■■□□□ 1.21
CCHCR1-230ENST00000513222 FAM109BQ6ICB4 259 aaPredicted RBP22.59■■□□□ 1.21
CCHCR1-230ENST00000513222 SGMS1Q86VZ5 419 aa22.59■■□□□ 1.21
CCHCR1-230ENST00000513222 ZNF654Q8IZM8 581 aa22.59■■□□□ 1.21
CCHCR1-230ENST00000513222 POLR3EQ9NVU0 708 aa22.59■■□□□ 1.21
CCHCR1-230ENST00000513222 SH2B2O14492 632 aaPredicted RBP22.58■■□□□ 1.21
CCHCR1-230ENST00000513222 PRC1O43663 620 aa22.58■■□□□ 1.21
CCHCR1-230ENST00000513222 KPNA6O60684 536 aa22.58■■□□□ 1.21
CCHCR1-230ENST00000513222 EIF3JO75822 258 aaKnown RBP22.58■■□□□ 1.21
CCHCR1-230ENST00000513222 PURAQ00577 322 aaKnown RBP22.58■■□□□ 1.21
CCHCR1-230ENST00000513222 PPP2R5BQ15173 497 aa22.58■■□□□ 1.21
CCHCR1-230ENST00000513222 SHHQ15465 462 aa22.58■■□□□ 1.21
CCHCR1-230ENST00000513222 STXBP2Q15833 593 aa22.58■■□□□ 1.21
CCHCR1-230ENST00000513222 PIGSQ96S52 555 aa22.58■■□□□ 1.21
CCHCR1-230ENST00000513222 LZTS2Q9BRK4 669 aa22.58■■□□□ 1.21
CCHCR1-230ENST00000513222 ANO2Q9NQ90 1003 aa22.58■■□□□ 1.21
CCHCR1-230ENST00000513222 PXMP2Q9NR77 195 aa22.58■■□□□ 1.21
CCHCR1-230ENST00000513222 TTLL4Q14679 1199 aa22.57■■□□□ 1.2
CCHCR1-230ENST00000513222 MFSD5Q6N075 450 aa22.57■■□□□ 1.2
CCHCR1-230ENST00000513222 CASC1Q6TDU7 716 aa22.57■■□□□ 1.2
CCHCR1-230ENST00000513222 KCNB2Q92953 911 aa22.57■■□□□ 1.2
CCHCR1-230ENST00000513222 EMID1Q96A84 441 aaPredicted RBP22.57■■□□□ 1.2
CCHCR1-230ENST00000513222 GPHNQ9NQX3 736 aaPredicted RBP22.57■■□□□ 1.2
CCHCR1-230ENST00000513222 ARIH2O95376 493 aa22.56■■□□□ 1.2
CCHCR1-230ENST00000513222 CFBP00751 764 aa22.56■■□□□ 1.2
CCHCR1-230ENST00000513222 NR3C2P08235 984 aa22.56■■□□□ 1.2
CCHCR1-230ENST00000513222 TXNP10599 105 aaKnown RBP22.56■■□□□ 1.2
CCHCR1-230ENST00000513222 KIF5BP33176 963 aa22.56■■□□□ 1.2
CCHCR1-230ENST00000513222 EPHB4P54760 987 aa22.56■■□□□ 1.2
CCHCR1-230ENST00000513222 C9orf50Q5SZB4 431 aa22.56■■□□□ 1.2
CCHCR1-230ENST00000513222 RNF20Q5VTR2 975 aa22.56■■□□□ 1.2
CCHCR1-230ENST00000513222 VSIG10LQ86VR7 867 aa22.56■■□□□ 1.2
CCHCR1-230ENST00000513222 VTI1AQ96AJ9 217 aa22.56■■□□□ 1.2
CCHCR1-230ENST00000513222 FRMPD4Q14CM0 1322 aa22.56■■□□□ 1.2
CCHCR1-230ENST00000513222 TLR3O15455 904 aaKnown RBP22.55■■□□□ 1.2
CCHCR1-230ENST00000513222 CDC45O75419 566 aa22.55■■□□□ 1.2
CCHCR1-230ENST00000513222 CALM1P0DP23 149 aa22.55■■□□□ 1.2
CCHCR1-230ENST00000513222 CALM2P0DP24 149 aa22.55■■□□□ 1.2
CCHCR1-230ENST00000513222 CALM3P0DP25 149 aa22.55■■□□□ 1.2
CCHCR1-230ENST00000513222 GNAQP50148 359 aa22.55■■□□□ 1.2
CCHCR1-230ENST00000513222 EXOSC10Q01780 885 aaKnown RBP22.55■■□□□ 1.2
CCHCR1-230ENST00000513222 FPGSQ05932 587 aa22.55■■□□□ 1.2
CCHCR1-230ENST00000513222 ARHGEF16Q5VV41 709 aa22.55■■□□□ 1.2
CCHCR1-230ENST00000513222 OR6J1Q8NGC5 347 aa22.55■■□□□ 1.2
CCHCR1-230ENST00000513222 PDCD2LQ9BRP1 358 aa22.55■■□□□ 1.2
CCHCR1-230ENST00000513222 DDX41Q9UJV9 622 aaKnown RBP22.55■■□□□ 1.2
CCHCR1-230ENST00000513222 RGS20O76081 388 aa22.54■■□□□ 1.2
CCHCR1-230ENST00000513222 BRDTQ58F21 947 aaPredicted RBP22.54■■□□□ 1.2
CCHCR1-230ENST00000513222 CTCFLQ8NI51 663 aaPredicted RBP22.54■■□□□ 1.2
CCHCR1-230ENST00000513222 CCDC136Q96JN2 1154 aa22.54■■□□□ 1.2
CCHCR1-230ENST00000513222 MTG1Q9BT17 334 aaPredicted RBP22.54■■□□□ 1.2
CCHCR1-230ENST00000513222 COL6A3P12111 3177 aa22.54■■□□□ 1.2
CCHCR1-230ENST00000513222 ARHGAP1Q07960 439 aa22.53■■□□□ 1.2
CCHCR1-230ENST00000513222 ALDH8A1Q9H2A2 487 aaPredicted RBP22.53■■□□□ 1.2
CCHCR1-230ENST00000513222 GCOM1H8Y6P7 765 aaPredicted RBP22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 PIK3CDO00329 1044 aa22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 POLR2MP0CAP2 368 aa22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 TGFB3P10600 412 aa22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 HOXD8P13378 290 aaPredicted RBP22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 EIF2AK2P19525 551 aaKnown RBP22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 SMAD3P84022 425 aaKnown RBP22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 PTPN11Q06124 597 aaPredicted RBP22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 RASIP1Q5U651 963 aa22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 NFRKBQ6P4R8 1299 aa22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 KCNV1Q6PIU1 500 aa22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 C16orf59Q7L2K0 433 aa22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 HOMER1Q86YM7 354 aa22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 RASEFQ8IZ41 740 aa22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 SRBD1Q8N5C6 995 aaKnown RBP22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 COPS5Q92905 334 aa22.52■■□□□ 1.2
CCHCR1-230ENST00000513222 B4GALT4O60513 344 aa22.51■■□□□ 1.19
CCHCR1-230ENST00000513222 GH1P01241 217 aa22.51■■□□□ 1.19
CCHCR1-230ENST00000513222 PGM5Q15124 567 aa22.51■■□□□ 1.19
CCHCR1-230ENST00000513222 DHX32Q7L7V1 743 aaKnown RBP22.51■■□□□ 1.19
CCHCR1-230ENST00000513222 FANCBQ8NB91 859 aa22.51■■□□□ 1.19
CCHCR1-230ENST00000513222 NEK1Q96PY6 1258 aa22.51■■□□□ 1.19
CCHCR1-230ENST00000513222 MYL10Q9BUA6 226 aa22.51■■□□□ 1.19
CCHCR1-230ENST00000513222 MTMR10Q9NXD2 777 aa22.51■■□□□ 1.19
CCHCR1-230ENST00000513222 CCDC69A6NI79 296 aa22.5■■□□□ 1.19
CCHCR1-230ENST00000513222 PSMC6P62333 389 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms