RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 MRPL12P52815 198 aaKnown RBP13.46□□□□□ -0.26
SH3RF1-205ENST00000511421 TLE2Q04725 743 aa13.46□□□□□ -0.26
SH3RF1-205ENST00000511421 TRAF1Q13077 416 aa13.46□□□□□ -0.26
SH3RF1-205ENST00000511421 CMTR1Q8N1G2 835 aaKnown RBP13.46□□□□□ -0.26
SH3RF1-205ENST00000511421 SAMD3Q8N6K7 520 aa13.46□□□□□ -0.26
SH3RF1-205ENST00000511421 FANCBQ8NB91 859 aa13.46□□□□□ -0.26
SH3RF1-205ENST00000511421 PIBF1Q8WXW3 757 aa13.46□□□□□ -0.26
SH3RF1-205ENST00000511421 IWS1Q96ST2 819 aa13.46□□□□□ -0.26
SH3RF1-205ENST00000511421 AP5M1Q9H0R1 490 aa13.46□□□□□ -0.26
SH3RF1-205ENST00000511421 STARD7Q9NQZ5 370 aa13.46□□□□□ -0.26
SH3RF1-205ENST00000511421 ELP1O95163 1332 aa13.46□□□□□ -0.26
SH3RF1-205ENST00000511421 HMGB1P09429 215 aaKnown RBP13.45□□□□□ -0.26
SH3RF1-205ENST00000511421 FSCN1Q16658 493 aaKnown RBP13.45□□□□□ -0.26
SH3RF1-205ENST00000511421 APOA5Q6Q788 366 aa13.45□□□□□ -0.26
SH3RF1-205ENST00000511421 RRP36Q96EU6 259 aaKnown RBP13.45□□□□□ -0.26
SH3RF1-205ENST00000511421 GLT1D1Q96MS3 346 aa13.45□□□□□ -0.26
SH3RF1-205ENST00000511421 PXMP2Q9NR77 195 aa13.45□□□□□ -0.26
SH3RF1-205ENST00000511421 BRPF3Q9ULD4 1205 aa13.45□□□□□ -0.26
SH3RF1-205ENST00000511421 EPB41L2O43491 1005 aaKnown RBP13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 CPA1P15085 419 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 HOXA13P31271 388 aaPredicted RBP13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 CDK7P50613 346 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 ARHGEF16Q5VV41 709 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 TMTC3Q6ZXV5 915 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 ANKRD33Q7Z3H0 272 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 MICU3Q86XE3 530 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 SCFD2Q8WU76 684 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 PDLIM7Q9NR12 457 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 GCOM1H8Y6P7 765 aaPredicted RBP13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 ARIH2O95376 493 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 NR3C2P08235 984 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 POLR2MP0CAP2 368 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 EIF2AK2P19525 551 aaKnown RBP13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 FXR1P51114 621 aaKnown RBP eCLIP13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 STXBP2Q15833 593 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 CCDC62Q6P9F0 684 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 CXCL17Q6UXB2 119 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 SH3RF1Q7Z6J0 888 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 COPS5Q92905 334 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 JAKMIP1Q96N16 626 aaKnown RBP13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 TOX2Q96NM4 488 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 PDCD2LQ9BRP1 358 aa13.44□□□□□ -0.26
SH3RF1-205ENST00000511421 A0A1W2PPC1 479 aa13.43□□□□□ -0.26
SH3RF1-205ENST00000511421 TRIM43BA6NCK2 446 aa13.43□□□□□ -0.26
SH3RF1-205ENST00000511421 NKRFO15226 690 aaKnown RBP eCLIP13.43□□□□□ -0.26
SH3RF1-205ENST00000511421 PQBP1O60828 265 aaKnown RBP13.43□□□□□ -0.26
SH3RF1-205ENST00000511421 MDM2Q00987 491 aaPredicted RBP13.43□□□□□ -0.26
SH3RF1-205ENST00000511421 TTLL4Q14679 1199 aa13.43□□□□□ -0.26
SH3RF1-205ENST00000511421 PPP2R5BQ15173 497 aa13.43□□□□□ -0.26
SH3RF1-205ENST00000511421 SYNE3Q6ZMZ3 975 aa13.43□□□□□ -0.26
SH3RF1-205ENST00000511421 TRIM43Q96BQ3 446 aaPredicted RBP13.43□□□□□ -0.26
SH3RF1-205ENST00000511421 USP26Q9BXU7 913 aa13.43□□□□□ -0.26
SH3RF1-205ENST00000511421 A0A0U1RQG5 324 aaPredicted RBP13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 ARVCFO00192 962 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 ZBTB43O43298 467 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 ZEB2O60315 1214 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 EIF3JO75822 258 aaKnown RBP13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 CABYRO75952 493 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 CLTBP09497 229 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 TXNP10599 105 aaKnown RBP13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 FAAP100Q0VG06 881 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 FUT2Q10981 343 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 SEPT14Q6ZU15 432 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 FBXL16Q8N461 479 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 CCDC82Q8N4S0 544 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 SLC43A3Q8NBI5 491 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 OR6J1Q8NGC5 347 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 IL31RAQ8NI17 732 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 VTI1AQ96AJ9 217 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 PRDM5Q9NQX1 630 aaPredicted RBP13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 FAM217BQ9NTX9 383 aaPredicted RBP13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 RBM28Q9NW13 759 aaKnown RBP13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 PRKAG2Q9UGJ0 569 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 SEC63Q9UGP8 760 aaKnown RBP13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 GRIN2DO15399 1336 aa13.42□□□□□ -0.26
SH3RF1-205ENST00000511421 KLF18A0A0U1RQI7 1052 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 hCG_1642624A0A1W2PR95 340 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 KIAA0355O15063 1070 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 RGS20O76081 388 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 SLC34A2O95436 690 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 RPS6KB1P23443 525 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 ITGB8P26012 769 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 RCAN1P53805 252 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 PGM5Q15124 567 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 RTN1Q16799 776 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 BLOC1S2Q6QNY1 142 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 Q6ZUG5 572 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 VSIG10LQ86VR7 867 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 FCHSD1Q86WN1 690 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 AGXT2Q9BYV1 514 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 CNTNAP5Q8WYK1 1306 aa13.41□□□□□ -0.26
SH3RF1-205ENST00000511421 A6NJR5 290 aa13.4□□□□□ -0.26
SH3RF1-205ENST00000511421 DCDC2CA8MYV0 355 aa13.4□□□□□ -0.26
SH3RF1-205ENST00000511421 MEIS2O14770 477 aa13.4□□□□□ -0.26
SH3RF1-205ENST00000511421 MYCLP12524 364 aaPredicted RBP13.4□□□□□ -0.26
SH3RF1-205ENST00000511421 CDC27P30260 824 aa13.4□□□□□ -0.26
SH3RF1-205ENST00000511421 CPT1AP50416 773 aa13.4□□□□□ -0.26
SH3RF1-205ENST00000511421 LY6KQ17RY6 165 aa13.4□□□□□ -0.26
SH3RF1-205ENST00000511421 LBHD1Q9BQE6 289 aaPredicted RBP13.4□□□□□ -0.26
SH3RF1-205ENST00000511421 UBE2OQ9C0C9 1292 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms