RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 USH1GQ495M9 461 aa27.04■■□□□ 1.92
CALCOCO2-209ENST00000507076 TMEM67Q5HYA8 995 aa27.04■■□□□ 1.92
CALCOCO2-209ENST00000507076 TBC1D10CQ8IV04 446 aa27.04■■□□□ 1.92
CALCOCO2-209ENST00000507076 UHRF1Q96T88 793 aaPredicted RBP27.04■■□□□ 1.92
CALCOCO2-209ENST00000507076 MPHOSPH6Q99547 160 aaKnown RBP27.04■■□□□ 1.92
CALCOCO2-209ENST00000507076 CERS4Q9HA82 394 aa27.04■■□□□ 1.92
CALCOCO2-209ENST00000507076 ZMYM6O95789 1325 aa27.04■■□□□ 1.92
CALCOCO2-209ENST00000507076 RFXAPO00287 272 aa27.03■■□□□ 1.92
CALCOCO2-209ENST00000507076 GOLGA8HP0CJ92 632 aa27.03■■□□□ 1.92
CALCOCO2-209ENST00000507076 TXNP10599 105 aaKnown RBP27.03■■□□□ 1.92
CALCOCO2-209ENST00000507076 COL9A1P20849 921 aa27.03■■□□□ 1.92
CALCOCO2-209ENST00000507076 CHMP4BP1P59074 171 aa27.03■■□□□ 1.92
CALCOCO2-209ENST00000507076 MFSD6Q6ZSS7 791 aa27.03■■□□□ 1.92
CALCOCO2-209ENST00000507076 DNERQ8NFT8 737 aa27.03■■□□□ 1.92
CALCOCO2-209ENST00000507076 CPVLQ9H3G5 476 aa27.03■■□□□ 1.92
CALCOCO2-209ENST00000507076 PNMA2Q9UL42 364 aa27.03■■□□□ 1.92
CALCOCO2-209ENST00000507076 CCDC171Q6TFL3 1326 aa27.02■■□□□ 1.92
CALCOCO2-209ENST00000507076 A6NJR5 290 aa27.02■■□□□ 1.92
CALCOCO2-209ENST00000507076 ARIH2O95376 493 aa27.02■■□□□ 1.92
CALCOCO2-209ENST00000507076 SNHG28P0DPA3 235 aa27.02■■□□□ 1.92
CALCOCO2-209ENST00000507076 ACTN1P12814 892 aa27.02■■□□□ 1.92
CALCOCO2-209ENST00000507076 NFRKBQ6P4R8 1299 aa27.02■■□□□ 1.92
CALCOCO2-209ENST00000507076 ZKSCAN3Q9BRR0 538 aa27.02■■□□□ 1.92
CALCOCO2-209ENST00000507076 TSPYL2Q9H2G4 693 aaPredicted RBP27.02■■□□□ 1.92
CALCOCO2-209ENST00000507076 TRANK1O15050 2925 aa27.02■■□□□ 1.92
CALCOCO2-209ENST00000507076 NEDD4P46934 1319 aa27.01■■□□□ 1.91
CALCOCO2-209ENST00000507076 IQCF3P0C7M6 154 aa27.01■■□□□ 1.91
CALCOCO2-209ENST00000507076 RETREG2Q8NC44 543 aa27.01■■□□□ 1.91
CALCOCO2-209ENST00000507076 TTC14Q96N46 770 aa27.01■■□□□ 1.91
CALCOCO2-209ENST00000507076 NECAB3Q96P71 396 aaPredicted RBP27.01■■□□□ 1.91
CALCOCO2-209ENST00000507076 CRBNQ96SW2 442 aa27.01■■□□□ 1.91
CALCOCO2-209ENST00000507076 FTOQ9C0B1 505 aaKnown RBP eCLIP27.01■■□□□ 1.91
CALCOCO2-209ENST00000507076 NOD1Q9Y239 953 aa27.01■■□□□ 1.91
CALCOCO2-209ENST00000507076 TRIM6-TRIM34B2RNG4 842 aa27■■□□□ 1.91
CALCOCO2-209ENST00000507076 PITPNM1O00562 1244 aa27■■□□□ 1.91
CALCOCO2-209ENST00000507076 KPNA6O60684 536 aa27■■□□□ 1.91
CALCOCO2-209ENST00000507076 RFC2P35250 354 aa27■■□□□ 1.91
CALCOCO2-209ENST00000507076 RRP1P56182 461 aaKnown RBP27■■□□□ 1.91
CALCOCO2-209ENST00000507076 TFF2Q03403 129 aa27■■□□□ 1.91
CALCOCO2-209ENST00000507076 SKIV2LQ15477 1246 aaKnown RBP27■■□□□ 1.91
CALCOCO2-209ENST00000507076 SLC9A7Q96T83 725 aa27■■□□□ 1.91
CALCOCO2-209ENST00000507076 UBA5Q9GZZ9 404 aa27■■□□□ 1.91
CALCOCO2-209ENST00000507076 EPOPA6NHQ4 379 aa26.99■■□□□ 1.91
CALCOCO2-209ENST00000507076 RAPGEFL1Q9UHV5 662 aa26.99■■□□□ 1.91
CALCOCO2-209ENST00000507076 B4DLN1 442 aa26.98■■□□□ 1.91
CALCOCO2-209ENST00000507076 ARHGEF15O94989 841 aa26.98■■□□□ 1.91
CALCOCO2-209ENST00000507076 MRPL12P52815 198 aaKnown RBP26.98■■□□□ 1.91
CALCOCO2-209ENST00000507076 PTPN11Q06124 597 aaPredicted RBP26.98■■□□□ 1.91
CALCOCO2-209ENST00000507076 RILPL2Q969X0 211 aa26.98■■□□□ 1.91
CALCOCO2-209ENST00000507076 PCP11498 1178 aaKnown RBP26.97■■□□□ 1.91
CALCOCO2-209ENST00000507076 BFSP2Q13515 415 aa26.97■■□□□ 1.91
CALCOCO2-209ENST00000507076 CDC37Q16543 378 aaPredicted RBP26.97■■□□□ 1.91
CALCOCO2-209ENST00000507076 GPATCH4Q5T3I0 446 aaKnown RBP26.97■■□□□ 1.91
CALCOCO2-209ENST00000507076 AFG1LQ8WV93 481 aa26.97■■□□□ 1.91
CALCOCO2-209ENST00000507076 TBC1D5Q92609 795 aa26.97■■□□□ 1.91
CALCOCO2-209ENST00000507076 ESR2Q92731 530 aa26.97■■□□□ 1.91
CALCOCO2-209ENST00000507076 RNF41Q9H4P4 317 aaPredicted RBP26.97■■□□□ 1.91
CALCOCO2-209ENST00000507076 MTCH2Q9Y6C9 303 aa26.97■■□□□ 1.91
CALCOCO2-209ENST00000507076 GTPBP6O43824 516 aaPredicted RBP26.96■■□□□ 1.91
CALCOCO2-209ENST00000507076 KCNQ1P51787 676 aa26.96■■□□□ 1.91
CALCOCO2-209ENST00000507076 PTGISQ16647 500 aa26.96■■□□□ 1.91
CALCOCO2-209ENST00000507076 KRT40Q6A162 431 aa26.96■■□□□ 1.91
CALCOCO2-209ENST00000507076 SEPT14Q6ZU15 432 aa26.96■■□□□ 1.91
CALCOCO2-209ENST00000507076 HERC6Q8IVU3 1022 aa26.96■■□□□ 1.91
CALCOCO2-209ENST00000507076 ARNTL2Q8WYA1 636 aa26.96■■□□□ 1.91
CALCOCO2-209ENST00000507076 LNPKQ9C0E8 428 aa26.96■■□□□ 1.91
CALCOCO2-209ENST00000507076 BDP1A6H8Y1 2624 aa26.95■■□□□ 1.91
CALCOCO2-209ENST00000507076 MMP3P08254 477 aa26.95■■□□□ 1.9
CALCOCO2-209ENST00000507076 TAP1Q03518 808 aa26.95■■□□□ 1.9
CALCOCO2-209ENST00000507076 HDAC1Q13547 482 aaPredicted RBP26.95■■□□□ 1.9
CALCOCO2-209ENST00000507076 LY6KQ17RY6 165 aa26.95■■□□□ 1.9
CALCOCO2-209ENST00000507076 CCDC62Q6P9F0 684 aa26.95■■□□□ 1.9
CALCOCO2-209ENST00000507076 CHST3Q7LGC8 479 aa26.95■■□□□ 1.9
CALCOCO2-209ENST00000507076 PHOSPHO2Q8TCD6 241 aa26.95■■□□□ 1.9
CALCOCO2-209ENST00000507076 TAAR1Q96RJ0 339 aa26.95■■□□□ 1.9
CALCOCO2-209ENST00000507076 COL20A1Q9P218 1284 aa26.95■■□□□ 1.9
CALCOCO2-209ENST00000507076 ABCB11O95342 1321 aa26.94■■□□□ 1.9
CALCOCO2-209ENST00000507076 BMP1P13497 986 aa26.94■■□□□ 1.9
CALCOCO2-209ENST00000507076 GDF6Q6KF10 455 aaPredicted RBP26.94■■□□□ 1.9
CALCOCO2-209ENST00000507076 PNMA1Q8ND90 353 aa26.94■■□□□ 1.9
CALCOCO2-209ENST00000507076 RGS22Q8NE09 1264 aa26.94■■□□□ 1.9
CALCOCO2-209ENST00000507076 SYTL5Q8TDW5 730 aaPredicted RBP26.94■■□□□ 1.9
CALCOCO2-209ENST00000507076 GH1P01241 217 aa26.93■■□□□ 1.9
CALCOCO2-209ENST00000507076 ARHGAP1Q07960 439 aa26.93■■□□□ 1.9
CALCOCO2-209ENST00000507076 SPRED2Q7Z698 418 aa26.93■■□□□ 1.9
CALCOCO2-209ENST00000507076 DGKHQ86XP1 1220 aa26.93■■□□□ 1.9
CALCOCO2-209ENST00000507076 TICAM2Q86XR7 235 aa26.93■■□□□ 1.9
CALCOCO2-209ENST00000507076 ADGRF4Q8IZF3 695 aa26.93■■□□□ 1.9
CALCOCO2-209ENST00000507076 CTAGE1Q96RT6 745 aa26.93■■□□□ 1.9
CALCOCO2-209ENST00000507076 KIF28PB7ZC32 967 aa26.92■■□□□ 1.9
CALCOCO2-209ENST00000507076 ZNF213O14771 459 aa26.92■■□□□ 1.9
CALCOCO2-209ENST00000507076 KDM4AO75164 1064 aa26.92■■□□□ 1.9
CALCOCO2-209ENST00000507076 POU3F3P20264 500 aaPredicted RBP26.92■■□□□ 1.9
CALCOCO2-209ENST00000507076 AAK1Q2M2I8 961 aa26.92■■□□□ 1.9
CALCOCO2-209ENST00000507076 CCDC155Q8N6L0 562 aa26.92■■□□□ 1.9
CALCOCO2-209ENST00000507076 KAT14Q9H8E8 782 aa26.92■■□□□ 1.9
CALCOCO2-209ENST00000507076 XIRP2A4UGR9 3374 aa26.91■■□□□ 1.9
CALCOCO2-209ENST00000507076 SIP14410 1827 aa26.91■■□□□ 1.9
CALCOCO2-209ENST00000507076 RBAK-RBAKDNI3L0D1 243 aa26.91■■□□□ 1.9
CALCOCO2-209ENST00000507076 BAIAP3O94812 1187 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms