RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 CAPNS1P04632 268 aa5.47□□□□□ -1.53
HMGB1P29-201ENST00000505659 LCP1P13796 627 aa5.47□□□□□ -1.53
HMGB1P29-201ENST00000505659 IGFBP6P24592 240 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P29-201ENST00000505659 FPR2P25090 351 aa5.47□□□□□ -1.53
HMGB1P29-201ENST00000505659 PPP2R2AP63151 447 aa5.47□□□□□ -1.53
HMGB1P29-201ENST00000505659 RAB33AQ14088 237 aa5.47□□□□□ -1.53
HMGB1P29-201ENST00000505659 VMACQ2NL98 169 aa5.47□□□□□ -1.53
HMGB1P29-201ENST00000505659 WWC2Q6AWC2 1192 aa5.47□□□□□ -1.53
HMGB1P29-201ENST00000505659 NLRP10Q86W26 655 aa5.47□□□□□ -1.53
HMGB1P29-201ENST00000505659 PLEKHO2Q8TD55 490 aa5.47□□□□□ -1.53
HMGB1P29-201ENST00000505659 USP33Q8TEY7 942 aa5.47□□□□□ -1.53
HMGB1P29-201ENST00000505659 C1orf159Q96HA4 380 aa5.47□□□□□ -1.53
HMGB1P29-201ENST00000505659 IRS2Q9Y4H2 1338 aa5.47□□□□□ -1.53
HMGB1P29-201ENST00000505659 SCG5P05408 212 aa5.46□□□□□ -1.54
HMGB1P29-201ENST00000505659 ATF2P15336 505 aa5.46□□□□□ -1.54
HMGB1P29-201ENST00000505659 HOXC12P31275 282 aa5.46□□□□□ -1.54
HMGB1P29-201ENST00000505659 FBLN7Q53RD9 439 aa5.46□□□□□ -1.54
HMGB1P29-201ENST00000505659 ZNF385BQ569K4 471 aa5.46□□□□□ -1.54
HMGB1P29-201ENST00000505659 CABP7Q86V35 215 aa5.46□□□□□ -1.54
HMGB1P29-201ENST00000505659 FAM129CQ86XR2 697 aa5.46□□□□□ -1.54
HMGB1P29-201ENST00000505659 PPIL6Q8IXY8 311 aa5.46□□□□□ -1.54
HMGB1P29-201ENST00000505659 DIO2Q92813 273 aa5.46□□□□□ -1.54
HMGB1P29-201ENST00000505659 DACT3Q96B18 629 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P29-201ENST00000505659 TANGO6Q9C0B7 1094 aa5.46□□□□□ -1.54
HMGB1P29-201ENST00000505659 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGB1P29-201ENST00000505659 C22orf46C9J442 243 aa5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 RFXAPO00287 272 aa5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 MEFVO15553 781 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 STK10O94804 968 aaKnown RBP5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 ASGR2P07307 311 aa5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 PMLP29590 882 aa5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 BCL6P41182 706 aa5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 SLC35F1Q5T1Q4 408 aa5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 CNKSR3Q6P9H4 555 aa5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 AMIGO3Q86WK7 504 aa5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 NETO2Q8NC67 525 aa5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 RCBTB1Q8NDN9 531 aa5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 ALG3Q92685 438 aa5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 IER2Q9BTL4 223 aa5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 TRIM55Q9BYV6 548 aa5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 ARHGEF4Q9NR80 690 aa5.45□□□□□ -1.54
HMGB1P29-201ENST00000505659 CCDC85CA6NKD9 419 aa5.44□□□□□ -1.54
HMGB1P29-201ENST00000505659 PLA2G1BP04054 148 aaKnown RBP5.44□□□□□ -1.54
HMGB1P29-201ENST00000505659 AFF3P51826 1226 aaKnown RBP5.44□□□□□ -1.54
HMGB1P29-201ENST00000505659 YOD1Q5VVQ6 348 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P29-201ENST00000505659 TCERG1LQ5VWI1 586 aa5.44□□□□□ -1.54
HMGB1P29-201ENST00000505659 E4F1Q66K89 784 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P29-201ENST00000505659 SIAH1Q8IUQ4 282 aa5.44□□□□□ -1.54
HMGB1P29-201ENST00000505659 TSPAN17Q96FV3 270 aa5.44□□□□□ -1.54
HMGB1P29-201ENST00000505659 PWWP2AQ96N64 755 aa5.44□□□□□ -1.54
HMGB1P29-201ENST00000505659 SYT3Q9BQG1 590 aa5.44□□□□□ -1.54
HMGB1P29-201ENST00000505659 EPN3Q9H201 632 aa5.44□□□□□ -1.54
HMGB1P29-201ENST00000505659 TIMM13Q9Y5L4 95 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P29-201ENST00000505659 AGRPO00253 132 aa5.43□□□□□ -1.54
HMGB1P29-201ENST00000505659 DLX3O60479 287 aa5.43□□□□□ -1.54
HMGB1P29-201ENST00000505659 TRIM13O60858 407 aa5.43□□□□□ -1.54
HMGB1P29-201ENST00000505659 PFKLP17858 780 aa5.43□□□□□ -1.54
HMGB1P29-201ENST00000505659 BMP7P18075 431 aa5.43□□□□□ -1.54
HMGB1P29-201ENST00000505659 RPL11P62913 178 aaKnown RBP5.43□□□□□ -1.54
HMGB1P29-201ENST00000505659 KCNAB2Q13303 367 aa5.43□□□□□ -1.54
HMGB1P29-201ENST00000505659 ACBD5Q5T8D3 534 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P29-201ENST00000505659 SPATC1Q76KD6 591 aa5.43□□□□□ -1.54
HMGB1P29-201ENST00000505659 CEP68Q76N32 757 aa5.43□□□□□ -1.54
HMGB1P29-201ENST00000505659 CKAP2LQ8IYA6 745 aa5.43□□□□□ -1.54
HMGB1P29-201ENST00000505659 PEX11GQ96HA9 241 aa5.43□□□□□ -1.54
HMGB1P29-201ENST00000505659 C8orf37Q96NL8 207 aa5.43□□□□□ -1.54
HMGB1P29-201ENST00000505659 PCDHA2Q9Y5H9 948 aa5.43□□□□□ -1.54
HMGB1P29-201ENST00000505659 BLACEA4D250 179 aa5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 SGSM2O43147 1006 aa5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 PRODHO43272 600 aa5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 MSCO60682 206 aa5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 CPP00450 1065 aa5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 INHBBP09529 407 aa5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 ATP2B1P20020 1258 aa5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 GTF2F1P35269 517 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 LTBRP36941 435 aa5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 FOXO4P98177 505 aa5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 TESK1Q15569 626 aa5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 ADGRG2Q8IZP9 1017 aa5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 CCDC140Q96MF4 163 aa5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 AARSD1Q9BTE6 412 aaKnown RBP5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 PPARGC1AQ9UBK2 798 aaKnown RBP5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 PPP1R1BQ9UD71 204 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 PFDN2Q9UHV9 154 aa5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 NUDT5Q9UKK9 219 aa5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 MSRB2Q9Y3D2 182 aa5.42□□□□□ -1.54
HMGB1P29-201ENST00000505659 ADAMTS20P59510 1910 aa5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 A0A1B0GTL3 188 aa5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 NCAM1P13591 858 aa5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 MAP4K2Q12851 820 aa5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 TARBP2Q15633 366 aaKnown RBP5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 NTRK3Q16288 839 aa5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 IQCEQ6IPM2 695 aa5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 USP53Q70EK8 1073 aa5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 DCP2Q8IU60 420 aaKnown RBP5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 Q8N1Y9 231 aa5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 TP53I13Q8NBR0 393 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 SMARCC2Q8TAQ2 1214 aa5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 KCTD13Q8WZ19 329 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 185.9 ms