RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 PRPHP41219 470 aa20.71■□□□□ 0.91
SCARB2-203ENST00000502908 SND1Q7KZF4 910 aaKnown RBP eCLIP20.71■□□□□ 0.911e-8■■■□□ 18.6
SCARB2-203ENST00000502908 TMC4Q7Z404 712 aa20.71■□□□□ 0.91
SCARB2-203ENST00000502908 NEK8Q86SG6 692 aa20.71■□□□□ 0.91
SCARB2-203ENST00000502908 FAM114A1Q8IWE2 563 aa20.71■□□□□ 0.91
SCARB2-203ENST00000502908 EHD4Q9H223 541 aa20.71■□□□□ 0.91
SCARB2-203ENST00000502908 TARSL2A2RTX5 802 aaKnown RBP20.71■□□□□ 0.91
SCARB2-203ENST00000502908 BUB1O43683 1085 aa20.71■□□□□ 0.91
SCARB2-203ENST00000502908 ZPR1O75312 459 aa20.71■□□□□ 0.91
SCARB2-203ENST00000502908 COL16A1Q07092 1604 aaPredicted RBP20.71■□□□□ 0.91
SCARB2-203ENST00000502908 ZSCAN29Q8IWY8 852 aaPredicted RBP20.71■□□□□ 0.91
SCARB2-203ENST00000502908 RETREG2Q8NC44 543 aa20.71■□□□□ 0.91
SCARB2-203ENST00000502908 ERGIC2Q96RQ1 377 aa20.71■□□□□ 0.91
SCARB2-203ENST00000502908 NDST4Q9H3R1 872 aa20.71■□□□□ 0.91
SCARB2-203ENST00000502908 FRMPD2Q68DX3 1309 aaPredicted RBP20.7■□□□□ 0.9
SCARB2-203ENST00000502908 LAD1O00515 517 aa20.7■□□□□ 0.9
SCARB2-203ENST00000502908 AKR1B10O60218 316 aa20.7■□□□□ 0.9
SCARB2-203ENST00000502908 VWA3BQ502W6 1294 aa20.7■□□□□ 0.9
SCARB2-203ENST00000502908 TTC19Q6DKK2 380 aaPredicted RBP20.7■□□□□ 0.9
SCARB2-203ENST00000502908 TMED8Q6PL24 325 aaPredicted RBP20.7■□□□□ 0.9
SCARB2-203ENST00000502908 NUDT12Q9BQG2 462 aa20.7■□□□□ 0.9
SCARB2-203ENST00000502908 SH2D4AQ9H788 454 aa20.7■□□□□ 0.9
SCARB2-203ENST00000502908 ANO9A1A5B4 782 aa20.7■□□□□ 0.9
SCARB2-203ENST00000502908 GFPT1Q06210 699 aaPredicted RBP20.7■□□□□ 0.9
SCARB2-203ENST00000502908 SETDB2Q96T68 719 aa20.7■□□□□ 0.9
SCARB2-203ENST00000502908 BLOC1S4Q9NUP1 217 aa20.7■□□□□ 0.9
SCARB2-203ENST00000502908 SIK3Q9Y2K2 1263 aa20.7■□□□□ 0.9
SCARB2-203ENST00000502908 SLC37A4O43826 429 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 MCM3P25205 808 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 GRB10Q13322 594 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 DNAJC21Q5F1R6 531 aaKnown RBP20.69■□□□□ 0.9
SCARB2-203ENST00000502908 CNNM4Q6P4Q7 775 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 ZNF662Q6ZS27 426 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 ANKS1AQ92625 1134 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 RPGRIP1Q96KN7 1286 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 AK8Q96MA6 479 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 EYA3Q99504 573 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 ANKRD2Q9GZV1 360 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 KANSL2Q9H9L4 492 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 PLAGL2Q9UPG8 496 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 WNK3Q9BYP7 1800 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 GOLGA6BA6NDN3 693 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 TDP2O95551 362 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 APBA1Q02410 837 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 NFIXQ14938 502 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 KRT25Q7Z3Z0 450 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 COA7Q96BR5 231 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 CALML4Q96GE6 196 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 MS4A14Q96JA4 679 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 TANGO6Q9C0B7 1094 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 CUEDC2Q9H467 287 aa20.69■□□□□ 0.9
SCARB2-203ENST00000502908 GOLGB1Q14789 3259 aaKnown RBP20.69■□□□□ 0.9
SCARB2-203ENST00000502908 USO1O60763 962 aaKnown RBP20.68■□□□□ 0.9
SCARB2-203ENST00000502908 TACC1O75410 805 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 SOGA3Q5TF21 947 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 GALNT17Q6IS24 598 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 AMOTL1Q8IY63 956 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 SPATA4Q8NEY3 305 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 TRIM58Q8NG06 486 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 OSBPL9Q96SU4 736 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 TSPYL1Q9H0U9 437 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 C6orf50Q9HD87 102 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 NLRC4Q9NPP4 1024 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 JRKLQ9Y4A0 524 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 EIF6P56537 245 aaKnown RBP20.68■□□□□ 0.9
SCARB2-203ENST00000502908 RASSF7Q02833 373 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 CENPPQ6IPU0 288 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 SV2BQ7L1I2 683 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 KCNK18Q7Z418 384 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 AMIGO3Q86WK7 504 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 POLD4Q9HCU8 107 aa20.68■□□□□ 0.9
SCARB2-203ENST00000502908 ROBO1Q9Y6N7 1651 aa20.67■□□□□ 0.9
SCARB2-203ENST00000502908 USP17L5A8MUK1 530 aa20.67■□□□□ 0.9
SCARB2-203ENST00000502908 RPS6KA5O75582 802 aa20.67■□□□□ 0.9
SCARB2-203ENST00000502908 NAP1L1P55209 391 aaKnown RBP20.67■□□□□ 0.9
SCARB2-203ENST00000502908 ENOX2Q16206 610 aaKnown RBP20.67■□□□□ 0.9
SCARB2-203ENST00000502908 SLC10A5Q5PT55 438 aa20.67■□□□□ 0.9
SCARB2-203ENST00000502908 SPTY2D1Q68D10 685 aaPredicted RBP20.67■□□□□ 0.9
SCARB2-203ENST00000502908 CLEC10AQ8IUN9 316 aa20.67■□□□□ 0.9
SCARB2-203ENST00000502908 AENQ8WTP8 325 aaKnown RBP20.67■□□□□ 0.9
SCARB2-203ENST00000502908 CEP95Q96GE4 821 aa20.67■□□□□ 0.9
SCARB2-203ENST00000502908 PNMA5Q96PV4 448 aa20.67■□□□□ 0.9
SCARB2-203ENST00000502908 SEC63Q9UGP8 760 aaKnown RBP20.67■□□□□ 0.9
SCARB2-203ENST00000502908 CDK8P49336 464 aa20.67■□□□□ 0.9
SCARB2-203ENST00000502908 AMPD3Q01432 767 aa20.67■□□□□ 0.9
SCARB2-203ENST00000502908 KCTD19Q17RG1 926 aaPredicted RBP20.67■□□□□ 0.9
SCARB2-203ENST00000502908 REXO1Q8N1G1 1221 aaKnown RBP20.67■□□□□ 0.9
SCARB2-203ENST00000502908 A0A1W2PQJ5 194 aa20.66■□□□□ 0.9
SCARB2-203ENST00000502908 GOLGA6CA6NDK9 693 aa20.66■□□□□ 0.9
SCARB2-203ENST00000502908 GOLGA6DP0CG33 693 aa20.66■□□□□ 0.9
SCARB2-203ENST00000502908 SLC1A4P43007 532 aa20.66■□□□□ 0.9
SCARB2-203ENST00000502908 SLC20A2Q08357 652 aa20.66■□□□□ 0.9
SCARB2-203ENST00000502908 MTMR8Q96EF0 704 aa20.66■□□□□ 0.9
SCARB2-203ENST00000502908 CDK5RAP3Q96JB5 506 aa20.66■□□□□ 0.9
SCARB2-203ENST00000502908 TSGA10Q9BZW7 698 aa20.66■□□□□ 0.9
SCARB2-203ENST00000502908 GOLGA6AQ9NYA3 693 aa20.66■□□□□ 0.9
SCARB2-203ENST00000502908 TBC1D7Q9P0N9 293 aa20.66■□□□□ 0.9
SCARB2-203ENST00000502908 CALCRLQ16602 461 aa20.66■□□□□ 0.9
SCARB2-203ENST00000502908 TDRD12Q587J7 1177 aaKnown RBP20.66■□□□□ 0.9
SCARB2-203ENST00000502908 CCDC181Q5TID7 509 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms