RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 CNTN2Q02246 1040 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 TFF2Q03403 129 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 PUS10Q3MIT2 529 aaKnown RBP8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 GNASQ5JWF2 1037 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 AKNAD1Q5T1N1 836 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 TMEM63BQ5T3F8 832 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 CXCL17Q6UXB2 119 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 MAMDC4Q6UXC1 1216 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 OTOP2Q7RTS6 562 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 CCDC144CPQ8IYA2 1237 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 LRRC47Q8N1G4 583 aaKnown RBP8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 ANKRD35Q8N283 1001 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 ATXN2LQ8WWM7 1075 aaKnown RBP8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 KIF1BPQ96EK5 621 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 IL23AQ9NPF7 189 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 BRWD1Q9NSI6 2320 aa8.3□□□□□ -1.08
CHCHD3-206ENST00000496427 MINDY4BA8MYZ0 360 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 F5H6K3 240 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 RFXAPO00287 272 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 WIPF1O43516 503 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 PRDM1O75626 825 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 CD4P01730 458 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 KCNQ1P51787 676 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 PSMC6P62333 389 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 MRPS5P82675 430 aaKnown RBP8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 KLRC3Q07444 240 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 RAB30Q15771 203 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 CCDC174Q6PII3 467 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 RASGRP2Q7LDG7 609 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 SIRT2Q8IXJ6 389 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 MSL3Q8N5Y2 521 aaKnown RBP8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 PCSK9Q8NBP7 692 aaKnown RBP8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 PPP1R13LQ8WUF5 828 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 HERVK_113Q902F9 699 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 SCLYQ96I15 445 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 WNT8AQ9H1J5 351 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 ABHD16BQ9H3Z7 469 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 HIPK3Q9H422 1215 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 SPC25Q9HBM1 224 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 EPB41L4AQ9HCS5 686 aaPredicted RBP8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 ARPP21Q9UBL0 812 aaPredicted RBP8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 CLIP2Q9UDT6 1046 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 MSRAQ9UJ68 235 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 ISY1Q9ULR0 285 aaKnown RBP8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 FCF1Q9Y324 198 aaKnown RBP8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 CTDP1Q9Y5B0 961 aaPredicted RBP8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 MICAL3Q7RTP6 2002 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 GRIN2DO15399 1336 aa8.29□□□□□ -1.08
CHCHD3-206ENST00000496427 DOCK5Q9H7D0 1870 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 ZBBXA8MT70 800 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 CCER2I3L3R5 266 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 SMARCA5O60264 1052 aaPredicted RBP8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 B4GALT4O60513 344 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 ZBED4O75132 1171 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 FGBP02675 491 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 PLA2G5P39877 138 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 SNAP25P60880 206 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 UBE3CQ15386 1083 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 HSP90AB4PQ58FF6 505 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 PPP2R2DQ66LE6 453 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 KRT40Q6A162 431 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 NOL8Q76FK4 1167 aaKnown RBP8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 EEPD1Q7L9B9 569 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 TLK2Q86UE8 772 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 HOMEZQ8IX15 550 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 FBXO16Q8IX29 292 aaPredicted RBP8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 PRPF38AQ8NAV1 312 aaKnown RBP8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 IL27Q8NEV9 243 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 VWCEQ96DN2 955 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 CEP95Q96GE4 821 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 DDRGK1Q96HY6 314 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 HAUS7Q99871 368 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.28□□□□□ -1.085e-14■□□□□ 9
CHCHD3-206ENST00000496427 TRPV6Q9H1D0 765 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 CERS4Q9HA82 394 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 SLC28A3Q9HAS3 691 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 MKNK2Q9HBH9 465 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 SLC38A10Q9HBR0 1119 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 PDGFCQ9NRA1 345 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 NYAP2Q9P242 653 aa8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 GMPR2Q9P2T1 348 aaKnown RBP8.28□□□□□ -1.08
CHCHD3-206ENST00000496427 IGKV6D-41A0A0C4DH26 115 aa8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 EPOPA6NHQ4 379 aa8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 GSG1L2A8MUP6 293 aa8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 ATP2A1O14983 1001 aa8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 ZBTB24O43167 697 aaPredicted RBP8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 ARHGEF15O94989 841 aa8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 ATP5JP18859 108 aa8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 HNRNPUQ00839 825 aaKnown RBP eCLIP8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 TNFAIP2Q03169 654 aa8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 ITGA7Q13683 1181 aa8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 HIC1Q14526 733 aa8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 SKIV2LQ15477 1246 aaKnown RBP8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 TSHZ3Q63HK5 1081 aa8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 SPRED2Q7Z698 418 aa8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 METTL3Q86U44 580 aaKnown RBP8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 SLC43A3Q8NBI5 491 aa8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 KCNV2Q8TDN2 545 aa8.27□□□□□ -1.09
CHCHD3-206ENST00000496427 FAM122AQ96E09 287 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms