RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 LRRC41Q15345 812 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 ZNF662Q6ZS27 426 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 CLEC10AQ8IUN9 316 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 REXO1Q8N1G1 1221 aaKnown RBP14.49□□□□□ -0.09
PTPN7-217ENST00000495688 ANKRD13CQ8N6S4 541 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 EHBP1Q8NDI1 1231 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 COG1Q8WTW3 980 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 ARHGEF1Q92888 912 aaKnown RBP14.49□□□□□ -0.09
PTPN7-217ENST00000495688 PNMA5Q96PV4 448 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 UIMC1Q96RL1 719 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 MMRN2Q9H8L6 949 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 EHD2Q9NZN4 543 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 ZC3H4Q9UPT8 1303 aaKnown RBP14.49□□□□□ -0.09
PTPN7-217ENST00000495688 SBF2Q86WG5 1849 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 NAV1Q8NEY1 1877 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 TNRC6CQ9HCJ0 1690 aaKnown RBP14.49□□□□□ -0.09
PTPN7-217ENST00000495688 A0A0U1RQG5 324 aaPredicted RBP14.49□□□□□ -0.09
PTPN7-217ENST00000495688 TRIM66O15016 1216 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 MOCS3O95396 460 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 TUBBP07437 444 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 GNA11P29992 359 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 EIF6P56537 245 aaKnown RBP14.49□□□□□ -0.09
PTPN7-217ENST00000495688 FKBP15Q5T1M5 1219 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 SOGA3Q5TF21 947 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 CENPPQ6IPU0 288 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 CNNM4Q6P4Q7 775 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 KCNK18Q7Z418 384 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 FAM114A1Q8IWE2 563 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 CALML4Q96GE6 196 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 NDST4Q9H3R1 872 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 MAGEF1Q9HAY2 307 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 SEC63Q9UGP8 760 aaKnown RBP14.49□□□□□ -0.09
PTPN7-217ENST00000495688 HPCAL4Q9UM19 191 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 PLAGL2Q9UPG8 496 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 SIK3Q9Y2K2 1263 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 VWA3BQ502W6 1294 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 BARGINQ6ZT62 677 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 SV2BQ7L1I2 683 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 TEX11Q8IYF3 940 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 IFIH1Q9BYX4 1025 aaKnown RBP14.49□□□□□ -0.09
PTPN7-217ENST00000495688 PLEKHA4Q9H4M7 779 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 SALL4Q9UJQ4 1053 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 EIF4A3P38919 411 aaKnown RBP14.48□□□□□ -0.09
PTPN7-217ENST00000495688 AMPD3Q01432 767 aa14.48□□□□□ -0.09
PTPN7-217ENST00000495688 SPA17Q15506 151 aa14.48□□□□□ -0.09
PTPN7-217ENST00000495688 C16orf86Q6ZW13 317 aa14.48□□□□□ -0.09
PTPN7-217ENST00000495688 CREG2Q8IUH2 290 aa14.48□□□□□ -0.09
PTPN7-217ENST00000495688 NEDD1Q8NHV4 660 aa14.48□□□□□ -0.09
PTPN7-217ENST00000495688 MTMR9Q96QG7 549 aa14.48□□□□□ -0.09
PTPN7-217ENST00000495688 LZTS2Q9BRK4 669 aa14.48□□□□□ -0.09
PTPN7-217ENST00000495688 DDX60LQ5H9U9 1706 aaKnown RBP14.48□□□□□ -0.09
PTPN7-217ENST00000495688 MATR3P43243 847 aaKnown RBP eCLIP14.48□□□□□ -0.09
PTPN7-217ENST00000495688 KIF11P52732 1056 aa14.48□□□□□ -0.09
PTPN7-217ENST00000495688 GSTO1P78417 241 aa14.48□□□□□ -0.09
PTPN7-217ENST00000495688 CALCRLQ16602 461 aa14.48□□□□□ -0.09
PTPN7-217ENST00000495688 LEKR1Q6ZMV7 388 aa14.48□□□□□ -0.09
PTPN7-217ENST00000495688 RRAGAQ7L523 313 aa14.48□□□□□ -0.09
PTPN7-217ENST00000495688 FEZ2Q9UHY8 353 aaPredicted RBP14.48□□□□□ -0.09
PTPN7-217ENST00000495688 PCDHA13Q9Y5I0 950 aa14.48□□□□□ -0.09
PTPN7-217ENST00000495688 A0A1W2PQJ5 194 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 ANO9A1A5B4 782 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 LRRC53A6NM62 1247 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 GGCXP38435 758 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 CKAP4Q07065 602 aaKnown RBP14.47□□□□□ -0.09
PTPN7-217ENST00000495688 FIGNQ5HY92 759 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 NFRKBQ6P4R8 1299 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 LRRC47Q8N1G4 583 aaKnown RBP14.47□□□□□ -0.09
PTPN7-217ENST00000495688 LARP4BQ92615 738 aaKnown RBP14.47□□□□□ -0.09
PTPN7-217ENST00000495688 SELENOOQ9BVL4 669 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 MED4Q9NPJ6 270 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 DMGDHQ9UI17 866 aaKnown RBP14.47□□□□□ -0.09
PTPN7-217ENST00000495688 SNX12Q9UMY4 172 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 NCK2O43639 380 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 PRPF6O94906 941 aaKnown RBP14.47□□□□□ -0.09
PTPN7-217ENST00000495688 SLC7A5Q01650 507 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 SEMA3FQ13275 785 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 GRAPQ13588 217 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 ECM1Q16610 540 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 CCNI2Q6ZMN8 369 aaPredicted RBP14.47□□□□□ -0.09
PTPN7-217ENST00000495688 GRAPLQ8TC17 118 aaPredicted RBP14.47□□□□□ -0.09
PTPN7-217ENST00000495688 LRRC1Q9BTT6 524 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 DEF6Q9H4E7 631 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 SH2D4AQ9H788 454 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 RTCBQ9Y3I0 505 aaKnown RBP14.47□□□□□ -0.09
PTPN7-217ENST00000495688 CDK5RAP2Q96SN8 1893 aa14.47□□□□□ -0.09
PTPN7-217ENST00000495688 TARSL2A2RTX5 802 aaKnown RBP14.46□□□□□ -0.09
PTPN7-217ENST00000495688 AGPSO00116 658 aa14.46□□□□□ -0.09
PTPN7-217ENST00000495688 AARSP49588 968 aaKnown RBP eCLIP14.46□□□□□ -0.09
PTPN7-217ENST00000495688 GPSM2P81274 684 aa14.46□□□□□ -0.09
PTPN7-217ENST00000495688 CDK17Q00537 523 aa14.46□□□□□ -0.09
PTPN7-217ENST00000495688 SKIDA1Q1XH10 827 aa14.46□□□□□ -0.09
PTPN7-217ENST00000495688 ZNF804AQ7Z570 1209 aa14.46□□□□□ -0.09
PTPN7-217ENST00000495688 CDK5RAP3Q96JB5 506 aa14.46□□□□□ -0.09
PTPN7-217ENST00000495688 KANSL2Q9H9L4 492 aa14.46□□□□□ -0.09
PTPN7-217ENST00000495688 LEMD3Q9Y2U8 911 aa14.46□□□□□ -0.09
PTPN7-217ENST00000495688 AKR1B10O60218 316 aa14.46□□□□□ -0.1
PTPN7-217ENST00000495688 LDHCP07864 332 aa14.46□□□□□ -0.1
PTPN7-217ENST00000495688 PDHBP11177 359 aa14.46□□□□□ -0.1
PTPN7-217ENST00000495688 GFPT1Q06210 699 aaPredicted RBP14.46□□□□□ -0.1
PTPN7-217ENST00000495688 UBE2SQ16763 222 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms