RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 PDE4DQ08499 809 aa16.56■□□□□ 0.24
CHTOP-206ENST00000495554 GPATCH4Q5T3I0 446 aaKnown RBP16.56■□□□□ 0.24
CHTOP-206ENST00000495554 SIAH1Q8IUQ4 282 aa16.56■□□□□ 0.24
CHTOP-206ENST00000495554 PI4KBQ9UBF8 816 aa16.56■□□□□ 0.24
CHTOP-206ENST00000495554 C21orf2O43822 256 aa16.55■□□□□ 0.24
CHTOP-206ENST00000495554 ASIC1P78348 528 aa16.55■□□□□ 0.24
CHTOP-206ENST00000495554 TMEM266Q2M3C6 531 aa16.55■□□□□ 0.24
CHTOP-206ENST00000495554 CYP26C1Q6V0L0 522 aa16.55■□□□□ 0.24
CHTOP-206ENST00000495554 CARD6Q9BX69 1037 aa16.55■□□□□ 0.24
CHTOP-206ENST00000495554 RAB34Q9BZG1 259 aa16.55■□□□□ 0.24
CHTOP-206ENST00000495554 LZTFL1Q9NQ48 299 aa16.55■□□□□ 0.24
CHTOP-206ENST00000495554 TADA3O75528 432 aa16.55■□□□□ 0.24
CHTOP-206ENST00000495554 H2AFXP16104 143 aaPredicted RBP16.55■□□□□ 0.24
CHTOP-206ENST00000495554 ARHGAP29Q52LW3 1261 aa16.55■□□□□ 0.24
CHTOP-206ENST00000495554 MB21D1Q8N884 522 aa16.55■□□□□ 0.24
CHTOP-206ENST00000495554 MKL1Q969V6 931 aa16.55■□□□□ 0.24
CHTOP-206ENST00000495554 RIC8AQ9NPQ8 531 aa16.55■□□□□ 0.24
CHTOP-206ENST00000495554 STK17AQ9UEE5 414 aa16.55■□□□□ 0.24
CHTOP-206ENST00000495554 LRWD1Q9UFC0 647 aa16.55■□□□□ 0.24
CHTOP-206ENST00000495554 MRFAP1Q9Y605 127 aa16.55■□□□□ 0.24
CHTOP-206ENST00000495554 KIF5CO60282 957 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 CCNE1P24864 410 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 KRT9P35527 623 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 SLC16A2P36021 539 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 ATP2B2Q01814 1243 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 PDIA5Q14554 519 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 CC2D2BQ6DHV5 1058 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 TATDN1Q6P1N9 297 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 KCTD1Q719H9 257 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 CSGALNACT2Q8N6G5 542 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 MTMR8Q96EF0 704 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 PRMT6Q96LA8 375 aaPredicted RBP16.54■□□□□ 0.24
CHTOP-206ENST00000495554 TDRD3Q9H7E2 651 aaKnown RBP16.54■□□□□ 0.24
CHTOP-206ENST00000495554 MYH4Q9Y623 1939 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 COBLL1Q53SF7 1204 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 CNNM4Q6P4Q7 775 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 SV2BQ7L1I2 683 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 ZNF507Q8TCN5 953 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 P2RX5Q93086 422 aa16.54■□□□□ 0.24
CHTOP-206ENST00000495554 RNF225M0QZC1 329 aaPredicted RBP16.53■□□□□ 0.24
CHTOP-206ENST00000495554 EEF2P13639 858 aaKnown RBP16.53■□□□□ 0.24
CHTOP-206ENST00000495554 ERVK-24P63145 666 aa16.53■□□□□ 0.24
CHTOP-206ENST00000495554 STK4Q13043 487 aa16.53■□□□□ 0.24
CHTOP-206ENST00000495554 CERKLQ49MI3 558 aaPredicted RBP16.53■□□□□ 0.24
CHTOP-206ENST00000495554 PPP4R3AQ6IN85 833 aa16.53■□□□□ 0.24
CHTOP-206ENST00000495554 DUSP9Q99956 384 aaKnown RBP16.53■□□□□ 0.24
CHTOP-206ENST00000495554 USP17L10C9JJH3 530 aa16.53■□□□□ 0.24
CHTOP-206ENST00000495554 SLC37A4O43826 429 aa16.53■□□□□ 0.24
CHTOP-206ENST00000495554 TDP2O95551 362 aa16.53■□□□□ 0.24
CHTOP-206ENST00000495554 DNM2P50570 870 aa16.53■□□□□ 0.24
CHTOP-206ENST00000495554 FAM114A1Q8IWE2 563 aa16.53■□□□□ 0.24
CHTOP-206ENST00000495554 ZBTB5O15062 677 aa16.52■□□□□ 0.24
CHTOP-206ENST00000495554 PPIP5K2O43314 1243 aa16.52■□□□□ 0.24
CHTOP-206ENST00000495554 MRPL12P52815 198 aaKnown RBP16.52■□□□□ 0.24
CHTOP-206ENST00000495554 GRB10Q13322 594 aa16.52■□□□□ 0.24
CHTOP-206ENST00000495554 ZSCAN29Q8IWY8 852 aaPredicted RBP16.52■□□□□ 0.24
CHTOP-206ENST00000495554 OR8K1Q8NGG5 319 aa16.52■□□□□ 0.24
CHTOP-206ENST00000495554 CUL5Q93034 780 aa16.52■□□□□ 0.24
CHTOP-206ENST00000495554 CDK5RAP3Q96JB5 506 aa16.52■□□□□ 0.24
CHTOP-206ENST00000495554 IRX2Q9BZI1 471 aaPredicted RBP16.52■□□□□ 0.24
CHTOP-206ENST00000495554 NYAP2Q9P242 653 aa16.52■□□□□ 0.24
CHTOP-206ENST00000495554 PES1O00541 588 aaKnown RBP16.52■□□□□ 0.23
CHTOP-206ENST00000495554 TNNI2P48788 182 aa16.52■□□□□ 0.23
CHTOP-206ENST00000495554 CLK2P49760 499 aaKnown RBP16.52■□□□□ 0.23
CHTOP-206ENST00000495554 JAG1P78504 1218 aa16.52■□□□□ 0.23
CHTOP-206ENST00000495554 CCDC96Q2M329 555 aa16.52■□□□□ 0.23
CHTOP-206ENST00000495554 TUBGCP2Q9BSJ2 902 aa16.52■□□□□ 0.23
CHTOP-206ENST00000495554 LUC7L2Q9Y383 392 aaKnown RBP16.52■□□□□ 0.23
CHTOP-206ENST00000495554 PVALEFA0A1B0GWK0 134 aa16.51■□□□□ 0.23
CHTOP-206ENST00000495554 TTC26A0AVF1 554 aa16.51■□□□□ 0.23
CHTOP-206ENST00000495554 KCNA3P22001 575 aa16.51■□□□□ 0.23
CHTOP-206ENST00000495554 PPP2R3AQ06190 1150 aa16.51■□□□□ 0.23
CHTOP-206ENST00000495554 SEPT2Q15019 361 aa16.51■□□□□ 0.23
CHTOP-206ENST00000495554 ANKRD40Q6AI12 368 aa16.51■□□□□ 0.23
CHTOP-206ENST00000495554 SUPT20HQ8NEM7 779 aa16.51■□□□□ 0.23
CHTOP-206ENST00000495554 LARP4BQ92615 738 aaKnown RBP16.51■□□□□ 0.23
CHTOP-206ENST00000495554 KANSL2Q9H9L4 492 aa16.51■□□□□ 0.23
CHTOP-206ENST00000495554 BLOC1S4Q9NUP1 217 aa16.51■□□□□ 0.23
CHTOP-206ENST00000495554 ARGLU1Q9NWB6 273 aaPredicted RBP16.51■□□□□ 0.23
CHTOP-206ENST00000495554 CAPN11Q9UMQ6 739 aa16.51■□□□□ 0.23
CHTOP-206ENST00000495554 FCER1AP12319 257 aa16.51■□□□□ 0.23
CHTOP-206ENST00000495554 RRP1BQ14684 758 aaKnown RBP16.51■□□□□ 0.23
CHTOP-206ENST00000495554 KRT79Q5XKE5 535 aa16.51■□□□□ 0.23
CHTOP-206ENST00000495554 DNAJC7Q99615 494 aa16.51■□□□□ 0.23
CHTOP-206ENST00000495554 TSR1Q2NL82 804 aaKnown RBP16.5■□□□□ 0.23
CHTOP-206ENST00000495554 ACRBPQ8NEB7 543 aa16.5■□□□□ 0.23
CHTOP-206ENST00000495554 PNMA5Q96PV4 448 aa16.5■□□□□ 0.23
CHTOP-206ENST00000495554 LRRC27Q9C0I9 530 aa16.5■□□□□ 0.23
CHTOP-206ENST00000495554 ATRNL1Q5VV63 1379 aa16.5■□□□□ 0.23
CHTOP-206ENST00000495554 ENTPD3O75355 529 aa16.5■□□□□ 0.23
CHTOP-206ENST00000495554 GCFC2P16383 781 aaKnown RBP16.5■□□□□ 0.23
CHTOP-206ENST00000495554 HOXA7P31268 230 aaPredicted RBP16.5■□□□□ 0.23
CHTOP-206ENST00000495554 TUBB2AQ13885 445 aa16.5■□□□□ 0.23
CHTOP-206ENST00000495554 UBE2SQ16763 222 aa16.5■□□□□ 0.23
CHTOP-206ENST00000495554 UNC13DQ70J99 1090 aa16.5■□□□□ 0.23
CHTOP-206ENST00000495554 RETREG2Q8NC44 543 aa16.5■□□□□ 0.23
CHTOP-206ENST00000495554 KIAA0895Q8NCT3 520 aa16.5■□□□□ 0.23
CHTOP-206ENST00000495554 TUBB2BQ9BVA1 445 aa16.5■□□□□ 0.23
CHTOP-206ENST00000495554 NUP58Q9BVL2 599 aa16.5■□□□□ 0.23
CHTOP-206ENST00000495554 GLT8D2Q9H1C3 349 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms