RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 ZNF446Q9NWS9 450 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 TMX2Q9Y320 296 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 PHIPQ8WWQ0 1821 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 BACE1P56817 501 aa20.63■□□□□ 0.89
COL16A1-215ENST00000488897 TROAPQ12815 778 aa20.63■□□□□ 0.89
COL16A1-215ENST00000488897 ZNF771Q7L3S4 317 aaPredicted RBP20.63■□□□□ 0.89
COL16A1-215ENST00000488897 RASAL3Q86YV0 1011 aa20.63■□□□□ 0.89
COL16A1-215ENST00000488897 NYAP2Q9P242 653 aa20.63■□□□□ 0.89
COL16A1-215ENST00000488897 PLIN4Q96Q06 1357 aa20.63■□□□□ 0.89
COL16A1-215ENST00000488897 PLEKHA8P1O95397 391 aa20.63■□□□□ 0.89
COL16A1-215ENST00000488897 SLFN13Q68D06 897 aa20.63■□□□□ 0.89
COL16A1-215ENST00000488897 DGKHQ86XP1 1220 aa20.63■□□□□ 0.89
COL16A1-215ENST00000488897 TC2NQ8N9U0 490 aa20.63■□□□□ 0.89
COL16A1-215ENST00000488897 CSRNP2Q9H175 543 aa20.63■□□□□ 0.89
COL16A1-215ENST00000488897 EFCAB8A8MWE9 144 aa20.62■□□□□ 0.89
COL16A1-215ENST00000488897 SLFN14P0C7P3 912 aa20.62■□□□□ 0.89
COL16A1-215ENST00000488897 SLC35G1Q2M3R5 365 aa20.62■□□□□ 0.89
COL16A1-215ENST00000488897 SPRYD7Q5W111 196 aa20.62■□□□□ 0.89
COL16A1-215ENST00000488897 OXER1Q8TDS5 423 aa20.62■□□□□ 0.89
COL16A1-215ENST00000488897 ARHGEF10LQ9HCE6 1279 aa20.62■□□□□ 0.89
COL16A1-215ENST00000488897 FAM155AB1AL88 458 aaPredicted RBP20.62■□□□□ 0.89
COL16A1-215ENST00000488897 PDHBP11177 359 aa20.62■□□□□ 0.89
COL16A1-215ENST00000488897 CLCN6P51797 869 aa20.62■□□□□ 0.89
COL16A1-215ENST00000488897 CCDC96Q2M329 555 aa20.62■□□□□ 0.89
COL16A1-215ENST00000488897 HSP90AA4PQ58FG1 418 aa20.62■□□□□ 0.89
COL16A1-215ENST00000488897 PTPN18Q99952 460 aa20.62■□□□□ 0.89
COL16A1-215ENST00000488897 BMP15O95972 392 aa20.61■□□□□ 0.89
COL16A1-215ENST00000488897 ATP2B1P20020 1258 aa20.61■□□□□ 0.89
COL16A1-215ENST00000488897 FAM193AP78312 1265 aa20.61■□□□□ 0.89
COL16A1-215ENST00000488897 PPATQ06203 517 aa20.61■□□□□ 0.89
COL16A1-215ENST00000488897 NR1I3Q14994 352 aa20.61■□□□□ 0.89
COL16A1-215ENST00000488897 TERF2Q15554 542 aa20.61■□□□□ 0.89
COL16A1-215ENST00000488897 PTPN21Q16825 1174 aa20.61■□□□□ 0.89
COL16A1-215ENST00000488897 TADA3O75528 432 aa20.61■□□□□ 0.89
COL16A1-215ENST00000488897 VCAM1P19320 739 aa20.61■□□□□ 0.89
COL16A1-215ENST00000488897 CASQ1P31415 396 aa20.61■□□□□ 0.89
COL16A1-215ENST00000488897 NOVP48745 357 aa20.61■□□□□ 0.89
COL16A1-215ENST00000488897 FKBP1BP68106 108 aa20.61■□□□□ 0.89
COL16A1-215ENST00000488897 MS4A4AQ96JQ5 239 aa20.61■□□□□ 0.89
COL16A1-215ENST00000488897 C1QTNF8P60827 252 aa20.6■□□□□ 0.89
COL16A1-215ENST00000488897 DEFB115Q30KQ5 88 aa20.6■□□□□ 0.89
COL16A1-215ENST00000488897 TRMT44Q8IYL2 757 aaKnown RBP20.6■□□□□ 0.89
COL16A1-215ENST00000488897 GRAMD1CQ8IYS0 662 aa20.6■□□□□ 0.89
COL16A1-215ENST00000488897 A0A1B0GTH6 734 aa20.59■□□□□ 0.89
COL16A1-215ENST00000488897 KRT2P35908 639 aa20.59■□□□□ 0.89
COL16A1-215ENST00000488897 SLC1A4P43007 532 aa20.59■□□□□ 0.89
COL16A1-215ENST00000488897 ADKP55263 362 aaKnown RBP20.59■□□□□ 0.89
COL16A1-215ENST00000488897 MOGSQ13724 837 aa20.59■□□□□ 0.89
COL16A1-215ENST00000488897 CATIPQ7Z7H3 387 aa20.59■□□□□ 0.89
COL16A1-215ENST00000488897 BRI3BPQ8WY22 251 aa20.59■□□□□ 0.89
COL16A1-215ENST00000488897 MKL1Q969V6 931 aa20.59■□□□□ 0.89
COL16A1-215ENST00000488897 CARD6Q9BX69 1037 aa20.59■□□□□ 0.89
COL16A1-215ENST00000488897 TANGO6Q9C0B7 1094 aa20.59■□□□□ 0.89
COL16A1-215ENST00000488897 VCPKMTQ9H867 229 aa20.59■□□□□ 0.89
COL16A1-215ENST00000488897 SAMSN1Q9NSI8 373 aaKnown RBP20.59■□□□□ 0.89
COL16A1-215ENST00000488897 MAD2L2Q9UI95 211 aa20.59■□□□□ 0.89
COL16A1-215ENST00000488897 PRPF3O43395 683 aaKnown RBP20.59■□□□□ 0.89
COL16A1-215ENST00000488897 CYP2C8P10632 490 aa20.59■□□□□ 0.89
COL16A1-215ENST00000488897 GNG11P61952 73 aa20.59■□□□□ 0.89
COL16A1-215ENST00000488897 IKQ13123 557 aaPredicted RBP20.59■□□□□ 0.89
COL16A1-215ENST00000488897 FERMT2Q96AC1 680 aa20.59■□□□□ 0.89
COL16A1-215ENST00000488897 RPAP3Q9H6T3 665 aaPredicted RBP20.59■□□□□ 0.89
COL16A1-215ENST00000488897 HTTP42858 3142 aa20.58■□□□□ 0.89
COL16A1-215ENST00000488897 FANCGO15287 622 aa20.58■□□□□ 0.89
COL16A1-215ENST00000488897 TMCO3Q6UWJ1 677 aa20.58■□□□□ 0.89
COL16A1-215ENST00000488897 USP49Q70CQ1 688 aa20.58■□□□□ 0.89
COL16A1-215ENST00000488897 MED15Q96RN5 788 aa20.58■□□□□ 0.89
COL16A1-215ENST00000488897 WDR18Q9BV38 432 aa20.58■□□□□ 0.89
COL16A1-215ENST00000488897 PHF20Q9BVI0 1012 aa20.58■□□□□ 0.89
COL16A1-215ENST00000488897 CREBZFQ9NS37 354 aa20.58■□□□□ 0.89
COL16A1-215ENST00000488897 RBM28Q9NW13 759 aaKnown RBP20.58■□□□□ 0.89
COL16A1-215ENST00000488897 MYH6P13533 1939 aa20.58■□□□□ 0.89
COL16A1-215ENST00000488897 CCL15-CCL14A0A0B4J2E2 113 aa20.58■□□□□ 0.88
COL16A1-215ENST00000488897 CCL15Q16663 113 aa20.58■□□□□ 0.88
COL16A1-215ENST00000488897 SPATA1Q5VX52 437 aa20.58■□□□□ 0.88
COL16A1-215ENST00000488897 DHX58Q96C10 678 aa20.58■□□□□ 0.88
COL16A1-215ENST00000488897 KIAA1683Q9H0B3 1180 aa20.58■□□□□ 0.88
COL16A1-215ENST00000488897 AS3MTQ9HBK9 375 aa20.58■□□□□ 0.88
COL16A1-215ENST00000488897 FHOD1Q9Y613 1164 aa20.58■□□□□ 0.88
COL16A1-215ENST00000488897 AKR1B15C9JRZ8 316 aaPredicted RBP20.57■□□□□ 0.88
COL16A1-215ENST00000488897 VEGFBP49765 207 aa20.57■□□□□ 0.88
COL16A1-215ENST00000488897 PPIL2Q13356 520 aa20.57■□□□□ 0.88
COL16A1-215ENST00000488897 POTEEQ6S8J3 1075 aa20.57■□□□□ 0.88
COL16A1-215ENST00000488897 CREBRFQ8IUR6 639 aa20.57■□□□□ 0.88
COL16A1-215ENST00000488897 FAM177A1Q8N128 213 aaPredicted RBP20.57■□□□□ 0.88
COL16A1-215ENST00000488897 SRBD1Q8N5C6 995 aaKnown RBP20.57■□□□□ 0.88
COL16A1-215ENST00000488897 ANKS1AQ92625 1134 aa20.57■□□□□ 0.88
COL16A1-215ENST00000488897 KIFC2Q96AC6 838 aa20.57■□□□□ 0.88
COL16A1-215ENST00000488897 CAPNS2Q96L46 248 aa20.57■□□□□ 0.88
COL16A1-215ENST00000488897 PANX2Q96RD6 677 aa20.57■□□□□ 0.88
COL16A1-215ENST00000488897 BRMS1Q9HCU9 246 aa20.57■□□□□ 0.88
COL16A1-215ENST00000488897 PKN1Q16512 942 aa20.57■□□□□ 0.88
COL16A1-215ENST00000488897 TOGARAM2Q6ZUX3 1019 aa20.57■□□□□ 0.88
COL16A1-215ENST00000488897 SH3RF1Q7Z6J0 888 aa20.57■□□□□ 0.88
COL16A1-215ENST00000488897 R3HDMLQ9H3Y0 253 aa20.57■□□□□ 0.88
COL16A1-215ENST00000488897 VPS54Q9P1Q0 977 aa20.57■□□□□ 0.88
COL16A1-215ENST00000488897 IGF2BP3O00425 579 aaKnown RBP eCLIP20.56■□□□□ 0.88
COL16A1-215ENST00000488897 CYTH3O43739 400 aa20.56■□□□□ 0.88
COL16A1-215ENST00000488897 CALM1P0DP23 149 aa20.56■□□□□ 0.88
COL16A1-215ENST00000488897 CALM2P0DP24 149 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms