RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 WWC2Q6AWC2 1192 aa7.24□□□□□ -1.25
SMC4-219ENST00000487747 FRMD5Q7Z6J6 570 aa7.24□□□□□ -1.25
SMC4-219ENST00000487747 CABP7Q86V35 215 aa7.24□□□□□ -1.25
SMC4-219ENST00000487747 SMARCC2Q8TAQ2 1214 aa7.24□□□□□ -1.25
SMC4-219ENST00000487747 USP33Q8TEY7 942 aa7.24□□□□□ -1.25
SMC4-219ENST00000487747 TGIF2Q9GZN2 237 aa7.24□□□□□ -1.25
SMC4-219ENST00000487747 ARNTLO00327 626 aa7.23□□□□□ -1.25
SMC4-219ENST00000487747 TBX1O43435 398 aa7.23□□□□□ -1.25
SMC4-219ENST00000487747 THBDP07204 575 aa7.23□□□□□ -1.25
SMC4-219ENST00000487747 RTP5Q14D33 572 aa7.23□□□□□ -1.25
SMC4-219ENST00000487747 GTF2IRD2BQ6EKJ0 949 aa7.23□□□□□ -1.25
SMC4-219ENST00000487747 GTF2IRD2Q86UP8 949 aa7.23□□□□□ -1.25
SMC4-219ENST00000487747 NETO2Q8NC67 525 aa7.23□□□□□ -1.25
SMC4-219ENST00000487747 BVESQ8NE79 360 aa7.23□□□□□ -1.25
SMC4-219ENST00000487747 PEX11GQ96HA9 241 aa7.23□□□□□ -1.25
SMC4-219ENST00000487747 SPATA6Q9NWH7 488 aaPredicted RBP7.23□□□□□ -1.25
SMC4-219ENST00000487747 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.23□□□□□ -1.25
SMC4-219ENST00000487747 INPP5FQ9Y2H2 1132 aa7.23□□□□□ -1.25
SMC4-219ENST00000487747 NPHS1O60500 1241 aa7.22□□□□□ -1.25
SMC4-219ENST00000487747 CELA3BP08861 270 aa7.22□□□□□ -1.25
SMC4-219ENST00000487747 NFKB2Q00653 900 aa7.22□□□□□ -1.25
SMC4-219ENST00000487747 NT5DC1Q5TFE4 455 aa7.22□□□□□ -1.25
SMC4-219ENST00000487747 PRRT2Q7Z6L0 340 aaPredicted RBP7.22□□□□□ -1.25
SMC4-219ENST00000487747 FERMT3Q86UX7 667 aa7.22□□□□□ -1.25
SMC4-219ENST00000487747 FRS2Q8WU20 508 aa7.22□□□□□ -1.25
SMC4-219ENST00000487747 PPP1R14AQ96A00 147 aa7.22□□□□□ -1.25
SMC4-219ENST00000487747 DDX11Q96FC9 970 aa7.22□□□□□ -1.25
SMC4-219ENST00000487747 MRGPRX3Q96LB0 322 aa7.22□□□□□ -1.25
SMC4-219ENST00000487747 APBA2Q99767 749 aa7.22□□□□□ -1.25
SMC4-219ENST00000487747 MARCH2Q9P0N8 246 aa7.22□□□□□ -1.25
SMC4-219ENST00000487747 MRVI1Q9Y6F6 885 aa7.22□□□□□ -1.25
SMC4-219ENST00000487747 ATF4P18848 351 aaPredicted RBP7.21□□□□□ -1.26
SMC4-219ENST00000487747 CACNB2Q08289 660 aaPredicted RBP7.21□□□□□ -1.26
SMC4-219ENST00000487747 TRIM26Q12899 539 aaPredicted RBP7.21□□□□□ -1.26
SMC4-219ENST00000487747 TEX2Q8IWB9 1127 aa7.21□□□□□ -1.26
SMC4-219ENST00000487747 TRIM59Q8IWR1 403 aa7.21□□□□□ -1.26
SMC4-219ENST00000487747 CPA5Q8WXQ8 436 aa7.21□□□□□ -1.26
SMC4-219ENST00000487747 MMP19Q99542 508 aa7.21□□□□□ -1.26
SMC4-219ENST00000487747 BDH2Q9BUT1 245 aa7.21□□□□□ -1.26
SMC4-219ENST00000487747 BTG4Q9NY30 223 aa7.21□□□□□ -1.26
SMC4-219ENST00000487747 JAG2Q9Y219 1238 aa7.21□□□□□ -1.26
SMC4-219ENST00000487747 DUSP10Q9Y6W6 482 aa7.21□□□□□ -1.26
SMC4-219ENST00000487747 B2RBV5 119 aa7.2□□□□□ -1.26
SMC4-219ENST00000487747 SMAD7O15105 426 aaKnown RBP7.2□□□□□ -1.26
SMC4-219ENST00000487747 C8BP07358 591 aa7.2□□□□□ -1.26
SMC4-219ENST00000487747 SMAD4Q13485 552 aaKnown RBP7.2□□□□□ -1.26
SMC4-219ENST00000487747 SLC9A5Q14940 896 aa7.2□□□□□ -1.26
SMC4-219ENST00000487747 CCDC103Q8IW40 242 aa7.2□□□□□ -1.26
SMC4-219ENST00000487747 CARFQ8N187 725 aa7.2□□□□□ -1.26
SMC4-219ENST00000487747 FAM26EQ8N5C1 309 aa7.2□□□□□ -1.26
SMC4-219ENST00000487747 NKX2-4Q9H2Z4 354 aa7.2□□□□□ -1.26
SMC4-219ENST00000487747 TMEFF2Q9UIK5 374 aaPredicted RBP7.2□□□□□ -1.26
SMC4-219ENST00000487747 NUDT5Q9UKK9 219 aa7.2□□□□□ -1.26
SMC4-219ENST00000487747 TRBV23OR9-2A0A075B6M9 112 aa7.19□□□□□ -1.26
SMC4-219ENST00000487747 SGSM2O43147 1006 aa7.19□□□□□ -1.26
SMC4-219ENST00000487747 SF1Q15637 639 aaKnown RBP7.19□□□□□ -1.26
SMC4-219ENST00000487747 C6orf15Q6UXA7 325 aaPredicted RBP7.19□□□□□ -1.26
SMC4-219ENST00000487747 NPLOC4Q8TAT6 608 aa7.19□□□□□ -1.26
SMC4-219ENST00000487747 DDX1Q92499 740 aaKnown RBP7.19□□□□□ -1.26
SMC4-219ENST00000487747 ZBTB8AQ96BR9 441 aa7.19□□□□□ -1.26
SMC4-219ENST00000487747 CCSER2Q9H7U1 834 aa7.19□□□□□ -1.26
SMC4-219ENST00000487747 CYP26B1Q9NR63 512 aa7.19□□□□□ -1.26
SMC4-219ENST00000487747 C22orf46C9J442 243 aa7.18□□□□□ -1.26
SMC4-219ENST00000487747 NOP56O00567 594 aaKnown RBP7.18□□□□□ -1.26
SMC4-219ENST00000487747 NOBOXO60393 691 aa7.18□□□□□ -1.26
SMC4-219ENST00000487747 ZBTB7AO95365 584 aa7.18□□□□□ -1.26
SMC4-219ENST00000487747 FPR2P25090 351 aa7.18□□□□□ -1.26
SMC4-219ENST00000487747 NCAPHQ15003 741 aa7.18□□□□□ -1.26
SMC4-219ENST00000487747 POMZP3Q6PJE2 187 aa7.18□□□□□ -1.26
SMC4-219ENST00000487747 GGNQ86UU5 652 aa7.18□□□□□ -1.26
SMC4-219ENST00000487747 STK32CQ86UX6 486 aa7.18□□□□□ -1.26
SMC4-219ENST00000487747 MICAL1Q8TDZ2 1067 aa7.18□□□□□ -1.26
SMC4-219ENST00000487747 BTN2A2Q8WVV5 523 aa7.18□□□□□ -1.26
SMC4-219ENST00000487747 GORASP1Q9BQQ3 440 aa7.18□□□□□ -1.26
SMC4-219ENST00000487747 STRIP2Q9ULQ0 834 aa7.18□□□□□ -1.26
SMC4-219ENST00000487747 ITGAVP06756 1048 aa7.17□□□□□ -1.26
SMC4-219ENST00000487747 ZNF143P52747 638 aaPredicted RBP7.17□□□□□ -1.26
SMC4-219ENST00000487747 PLP2Q04941 152 aa7.17□□□□□ -1.26
SMC4-219ENST00000487747 ZFYVE27Q5T4F4 411 aa7.17□□□□□ -1.26
SMC4-219ENST00000487747 USP40Q9NVE5 1235 aa7.17□□□□□ -1.26
SMC4-219ENST00000487747 FBXL7Q9UJT9 491 aa7.17□□□□□ -1.26
SMC4-219ENST00000487747 PRSS53Q2L4Q9 553 aa7.16□□□□□ -1.26
SMC4-219ENST00000487747 LARP1BQ659C4 914 aaKnown RBP7.16□□□□□ -1.26
SMC4-219ENST00000487747 MRM1Q6IN84 353 aaKnown RBP7.16□□□□□ -1.26
SMC4-219ENST00000487747 NLRP10Q86W26 655 aa7.16□□□□□ -1.26
SMC4-219ENST00000487747 ZNF761Q86XN6 746 aaPredicted RBP7.16□□□□□ -1.26
SMC4-219ENST00000487747 CRACR2BQ8N4Y2 399 aaPredicted RBP7.16□□□□□ -1.26
SMC4-219ENST00000487747 LINC00482Q8N8I6 264 aa7.16□□□□□ -1.26
SMC4-219ENST00000487747 KREMEN2Q8NCW0 462 aa7.16□□□□□ -1.26
SMC4-219ENST00000487747 CYP2C8P10632 490 aa7.15□□□□□ -1.26
SMC4-219ENST00000487747 ETFBP38117 255 aa7.15□□□□□ -1.26
SMC4-219ENST00000487747 BCL6P41182 706 aa7.15□□□□□ -1.26
SMC4-219ENST00000487747 SARSP49591 514 aaKnown RBP7.15□□□□□ -1.26
SMC4-219ENST00000487747 UBXN11Q5T124 520 aa7.15□□□□□ -1.26
SMC4-219ENST00000487747 DENND5AQ6IQ26 1287 aa7.15□□□□□ -1.26
SMC4-219ENST00000487747 ZNF227Q86WZ6 799 aa7.15□□□□□ -1.26
SMC4-219ENST00000487747 FAM178BQ8IXR5 827 aa7.15□□□□□ -1.26
SMC4-219ENST00000487747 C11orf84Q9BUA3 381 aaPredicted RBP7.15□□□□□ -1.26
SMC4-219ENST00000487747 NTMQ9P121 344 aa7.15□□□□□ -1.26
SMC4-219ENST00000487747 CNR2P34972 360 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms