RNA–Protein interactions for RNA: ENST00000486360.1

PPFIA4-205, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 4,547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-205ENST00000486360 IFT172Q9UG01 1749 aa17.12■□□□□ 0.33
PPFIA4-205ENST00000486360 NR2F2P24468 414 aa17.12■□□□□ 0.33
PPFIA4-205ENST00000486360 HOXA13P31271 388 aaPredicted RBP17.12■□□□□ 0.33
PPFIA4-205ENST00000486360 POLR2FP61218 127 aaKnown RBP17.12■□□□□ 0.33
PPFIA4-205ENST00000486360 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.12■□□□□ 0.33
PPFIA4-205ENST00000486360 AKR1B1P15121 316 aa17.12■□□□□ 0.33
PPFIA4-205ENST00000486360 TNNI1P19237 187 aa17.12■□□□□ 0.33
PPFIA4-205ENST00000486360 U2AF2P26368 475 aaKnown RBP eCLIP17.12■□□□□ 0.33
PPFIA4-205ENST00000486360 SNAP25P60880 206 aa17.12■□□□□ 0.33
PPFIA4-205ENST00000486360 HDXQ7Z353 690 aa17.12■□□□□ 0.33
PPFIA4-205ENST00000486360 NCAPG2Q86XI2 1143 aa17.12■□□□□ 0.33
PPFIA4-205ENST00000486360 SRBD1Q8N5C6 995 aaKnown RBP17.12■□□□□ 0.33
PPFIA4-205ENST00000486360 CCDC26Q8TAB7 109 aa17.12■□□□□ 0.33
PPFIA4-205ENST00000486360 NWD1Q149M9 1564 aa17.12■□□□□ 0.33
PPFIA4-205ENST00000486360 AP3B2Q13367 1082 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 KMT5BQ4FZB7 885 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 UTP14CQ5TAP6 766 aaKnown RBP17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 CCDC94Q9BW85 323 aaPredicted RBP17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 MEIS1O00470 390 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 STAG2Q8N3U4 1231 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 EN1Q05925 392 aaPredicted RBP17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 GOLGA8FQ08AF8 430 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 GOLGA8DPQ0D2H9 430 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 SARM1Q6SZW1 724 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 ZBTB9Q96C00 473 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 NACC1Q96RE7 527 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 ZNF341Q9BYN7 854 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 TSKSQ9UJT2 592 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 USP17L10C9JJH3 530 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 SORBS3O60504 671 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 GAP43P17677 238 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 ARMCX5Q6P1M9 558 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 VSTM4Q8IW00 320 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 SAR1BQ9Y6B6 198 aa17.11■□□□□ 0.33
PPFIA4-205ENST00000486360 SHPRHQ149N8 1683 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 CEP104O60308 925 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 PLA2G4BP0C869 781 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 EZRP15311 586 aaKnown RBP17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 CHRNA5P30532 468 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 RPS6KA1Q15418 735 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 TRIM58Q8NG06 486 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 BCL9O00512 1426 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 MAN2A1Q16706 1144 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 LIN9Q5TKA1 542 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 SHC4Q6S5L8 630 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 CCDC77Q9BR77 488 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 MTRF1LQ9UGC7 380 aaKnown RBP17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 KDM4FA0A1W2PPD8 638 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 F5H6K3 240 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 H0YCG3 227 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 KLRC3Q07444 240 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 SLC10A5Q5PT55 438 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 ZNF277Q9NRM2 450 aaPredicted RBP17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 FLT1P17948 1338 aa17.1■□□□□ 0.33
PPFIA4-205ENST00000486360 CALCOCO2Q13137 446 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 PPP1R7Q15435 360 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 CFAP58Q5T655 872 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 RCSD1Q6JBY9 416 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 PEX26Q7Z412 305 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 CCDC91Q7Z6B0 441 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 ATP6V0A1Q93050 837 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 USP17L15C9J2P7 530 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 USP17L13C9JLJ4 530 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 USP17L11C9JVI0 530 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 USP17L18D6R9N7 530 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 USP17L22D6RA61 530 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 USP17L17D6RBQ6 530 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 USP17L19D6RCP7 530 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 USP17L20D6RJB6 530 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 CASP1P29466 404 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 LIG4P49917 911 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 RBL2Q08999 1139 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 USP17L24Q0WX57 530 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 USP17L6PQ6QN14 398 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 UBL4BQ8N7F7 174 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 RETREG2Q8NC44 543 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 U2AF1L4Q8WU68 220 aaKnown RBP17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 FAM107BQ9H098 131 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 ZNF215Q9UL58 517 aaPredicted RBP17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 GDAQ9Y2T3 454 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 ATP2A1O14983 1001 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 DMP1Q13316 513 aaPredicted RBP17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 CUL4BQ13620 913 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 EXOC3L4Q17RC7 722 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 PPP1R18Q6NYC8 613 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 SENP2Q9HC62 589 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 IKBKGQ9Y6K9 419 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 N4BP1O75113 896 aaKnown RBP17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 ZBTB7AO95365 584 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 PSMD2Q13200 908 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 SYCE1Q8N0S2 351 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 BCL2L12Q9HB09 334 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 OGFRQ9NZT2 677 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 CALCOCO1Q9P1Z2 691 aa17.09■□□□□ 0.33
PPFIA4-205ENST00000486360 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.08■□□□□ 0.33
PPFIA4-205ENST00000486360 FDPSP14324 419 aaKnown RBP17.08■□□□□ 0.33
PPFIA4-205ENST00000486360 CFAP221Q4G0U5 840 aa17.08■□□□□ 0.33
PPFIA4-205ENST00000486360 MICALCLQ6ZW33 695 aa17.08■□□□□ 0.33
PPFIA4-205ENST00000486360 CCDC127Q96BQ5 260 aa17.08■□□□□ 0.33
PPFIA4-205ENST00000486360 PPP1R13BQ96KQ4 1090 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms