RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 USP14P54578 494 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 GRIPAP1Q4V328 841 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 GPATCH11Q8N954 259 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 JDP2Q8WYK2 163 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 SHISA4Q96DD7 197 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 TRIM47Q96LD4 638 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 REXO2Q9Y3B8 237 aaKnown RBP16.56■□□□□ 0.24
TTC3-219ENST00000485402 SLC7A5Q01650 507 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 SOGA3Q5TF21 947 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 ZFPM1Q8IX07 1006 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 SMCR8Q8TEV9 937 aaPredicted RBP16.56■□□□□ 0.24
TTC3-219ENST00000485402 EFCC1Q9HA90 598 aa16.56■□□□□ 0.24
TTC3-219ENST00000485402 PTGER2P43116 358 aa16.55■□□□□ 0.24
TTC3-219ENST00000485402 SND1Q7KZF4 910 aaKnown RBP eCLIP16.55■□□□□ 0.241e-6■□□□□ 8.4
TTC3-219ENST00000485402 ZDHHC15Q96MV8 337 aa16.55■□□□□ 0.24
TTC3-219ENST00000485402 PARP1P09874 1014 aaKnown RBP16.55■□□□□ 0.24
TTC3-219ENST00000485402 CXCR5P32302 372 aa16.55■□□□□ 0.24
TTC3-219ENST00000485402 OGFOD1Q8N543 542 aa16.55■□□□□ 0.24
TTC3-219ENST00000485402 LACRTQ9GZZ8 138 aa16.55■□□□□ 0.24
TTC3-219ENST00000485402 ZNF287Q9HBT7 754 aa16.55■□□□□ 0.24
TTC3-219ENST00000485402 MAGEC2Q9UBF1 373 aaPredicted RBP16.55■□□□□ 0.24
TTC3-219ENST00000485402 HPCAL4Q9UM19 191 aa16.55■□□□□ 0.24
TTC3-219ENST00000485402 SAMM50Q9Y512 469 aa16.55■□□□□ 0.24
TTC3-219ENST00000485402 SNED1Q8TER0 1413 aa16.55■□□□□ 0.24
TTC3-219ENST00000485402 GOLGA6CA6NDK9 693 aa16.55■□□□□ 0.24
TTC3-219ENST00000485402 GOLGA6DP0CG33 693 aa16.55■□□□□ 0.24
TTC3-219ENST00000485402 KLK7P49862 253 aa16.55■□□□□ 0.24
TTC3-219ENST00000485402 ICE2Q659A1 982 aa16.55■□□□□ 0.24
TTC3-219ENST00000485402 ELOA2Q8IYF1 753 aaPredicted RBP16.55■□□□□ 0.24
TTC3-219ENST00000485402 PRMT6Q96LA8 375 aaPredicted RBP16.55■□□□□ 0.24
TTC3-219ENST00000485402 AGPAT5Q9NUQ2 364 aa16.55■□□□□ 0.24
TTC3-219ENST00000485402 GOLGA6AQ9NYA3 693 aa16.55■□□□□ 0.24
TTC3-219ENST00000485402 B4DLN1 442 aa16.54■□□□□ 0.24
TTC3-219ENST00000485402 FAM76AQ8TAV0 307 aa16.54■□□□□ 0.24
TTC3-219ENST00000485402 SGIP1Q9BQI5 828 aa16.54■□□□□ 0.24
TTC3-219ENST00000485402 SMARCAL1Q9NZC9 954 aa16.54■□□□□ 0.24
TTC3-219ENST00000485402 FAM196BA6NMK8 535 aa16.54■□□□□ 0.24
TTC3-219ENST00000485402 PPFIA4O75335 1185 aa16.54■□□□□ 0.24
TTC3-219ENST00000485402 RASA1P20936 1047 aa16.54■□□□□ 0.24
TTC3-219ENST00000485402 STAT6P42226 847 aa16.54■□□□□ 0.24
TTC3-219ENST00000485402 AMPD2Q01433 879 aa16.54■□□□□ 0.24
TTC3-219ENST00000485402 RSBN1LQ6PCB5 846 aaPredicted RBP16.54■□□□□ 0.24
TTC3-219ENST00000485402 PPM1EQ8WY54 764 aa16.54■□□□□ 0.24
TTC3-219ENST00000485402 SELENOOQ9BVL4 669 aa16.54■□□□□ 0.24
TTC3-219ENST00000485402 IL17RBQ9NRM6 502 aa16.54■□□□□ 0.24
TTC3-219ENST00000485402 ZNHIT6Q9NWK9 470 aaKnown RBP16.54■□□□□ 0.24
TTC3-219ENST00000485402 ZNRF3Q9ULT6 936 aa16.54■□□□□ 0.24
TTC3-219ENST00000485402 CD2APQ9Y5K6 639 aa16.54■□□□□ 0.24
TTC3-219ENST00000485402 TIAM2Q8IVF5 1701 aa16.54■□□□□ 0.24
TTC3-219ENST00000485402 CLRN2A0PK11 232 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 GOLGA6BA6NDN3 693 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 PP2D1A8MPX8 630 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 VEGFAP15692 232 aaPredicted RBP16.53■□□□□ 0.24
TTC3-219ENST00000485402 NAP1L1P55209 391 aaKnown RBP16.53■□□□□ 0.24
TTC3-219ENST00000485402 SPAG1Q07617 926 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 RASGRP4Q8TDF6 673 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 DEF6Q9H4E7 631 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 KAT14Q9H8E8 782 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 RPN1P04843 607 aaKnown RBP16.53■□□□□ 0.24
TTC3-219ENST00000485402 TUBB4BP68371 445 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 KRT26Q7Z3Y9 468 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 ANKRD13CQ8N6S4 541 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 HAUS4Q9H6D7 363 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 KRT86O43790 486 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 PMS1P54277 932 aaKnown RBP16.53■□□□□ 0.24
TTC3-219ENST00000485402 EIF6P56537 245 aaKnown RBP16.53■□□□□ 0.24
TTC3-219ENST00000485402 CCDC96Q2M329 555 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 C16orf86Q6ZW13 317 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 COG1Q8WTW3 980 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 FERMT2Q96AC1 680 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 MTRQ99707 1265 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 MTA3Q9BTC8 594 aa16.53■□□□□ 0.24
TTC3-219ENST00000485402 PDE2AO00408 941 aaPredicted RBP16.52■□□□□ 0.24
TTC3-219ENST00000485402 RASSF7Q02833 373 aa16.52■□□□□ 0.24
TTC3-219ENST00000485402 CXCL9Q07325 125 aa16.52■□□□□ 0.24
TTC3-219ENST00000485402 TRAPPC11Q7Z392 1133 aa16.52■□□□□ 0.24
TTC3-219ENST00000485402 BCAS4Q8TDM0 211 aa16.52■□□□□ 0.24
TTC3-219ENST00000485402 HDAC7Q8WUI4 952 aa16.52■□□□□ 0.24
TTC3-219ENST00000485402 LIMA1Q9UHB6 759 aaKnown RBP16.52■□□□□ 0.24
TTC3-219ENST00000485402 SERPINA10Q9UK55 444 aa16.52■□□□□ 0.24
TTC3-219ENST00000485402 CORO7P57737 925 aa16.52■□□□□ 0.24
TTC3-219ENST00000485402 PKN1Q16512 942 aa16.52■□□□□ 0.24
TTC3-219ENST00000485402 SH3RF1Q7Z6J0 888 aa16.52■□□□□ 0.24
TTC3-219ENST00000485402 CTCFLQ8NI51 663 aaPredicted RBP16.52■□□□□ 0.24
TTC3-219ENST00000485402 SERPINB13Q9UIV8 391 aa16.52■□□□□ 0.24
TTC3-219ENST00000485402 RWDD2AQ9UIY3 292 aa16.52■□□□□ 0.24
TTC3-219ENST00000485402 RCCD1A6NED2 376 aa16.52■□□□□ 0.23
TTC3-219ENST00000485402 NFKBIEO00221 500 aa16.52■□□□□ 0.23
TTC3-219ENST00000485402 MPHOSPH10O00566 681 aaKnown RBP16.52■□□□□ 0.23
TTC3-219ENST00000485402 HLA-DOAP06340 250 aa16.52■□□□□ 0.23
TTC3-219ENST00000485402 IBSPP21815 317 aaPredicted RBP16.52■□□□□ 0.23
TTC3-219ENST00000485402 HERVK_113P62684 666 aa16.52■□□□□ 0.23
TTC3-219ENST00000485402 FKBP1AP62942 108 aaKnown RBP16.52■□□□□ 0.23
TTC3-219ENST00000485402 TBC1D8BQ0IIM8 1120 aa16.52■□□□□ 0.23
TTC3-219ENST00000485402 KCTD16Q68DU8 428 aa16.52■□□□□ 0.23
TTC3-219ENST00000485402 MYO1AQ9UBC5 1043 aa16.52■□□□□ 0.23
TTC3-219ENST00000485402 ZEB2O60315 1214 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 TUBBP07437 444 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 TROAPQ12815 778 aa16.51■□□□□ 0.23
TTC3-219ENST00000485402 RBM26Q5T8P6 1007 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms