RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 AKNAD1Q5T1N1 836 aa6.74□□□□□ -1.33
PTPN4-210ENST00000485247 LDHAL6AQ6ZMR3 332 aa6.74□□□□□ -1.33
PTPN4-210ENST00000485247 VPS37DQ86XT2 251 aa6.74□□□□□ -1.33
PTPN4-210ENST00000485247 ZFPM1Q8IX07 1006 aa6.74□□□□□ -1.33
PTPN4-210ENST00000485247 CCDC146Q8IYE0 955 aa6.74□□□□□ -1.33
PTPN4-210ENST00000485247 CMTR1Q8N1G2 835 aaKnown RBP6.74□□□□□ -1.33
PTPN4-210ENST00000485247 TBC1D22AQ8WUA7 517 aa6.74□□□□□ -1.33
PTPN4-210ENST00000485247 LPIN3Q9BQK8 851 aa6.74□□□□□ -1.33
PTPN4-210ENST00000485247 MRIQ9BWK5 157 aa6.74□□□□□ -1.33
PTPN4-210ENST00000485247 KRTAP4-6Q9BYQ5 205 aa6.74□□□□□ -1.33
PTPN4-210ENST00000485247 PRDM12Q9H4Q4 367 aa6.74□□□□□ -1.33
PTPN4-210ENST00000485247 CNNM1Q9NRU3 951 aa6.74□□□□□ -1.33
PTPN4-210ENST00000485247 AK9Q5TCS8 1911 aa6.74□□□□□ -1.33
PTPN4-210ENST00000485247 NCOR1O75376 2440 aa6.74□□□□□ -1.33
PTPN4-210ENST00000485247 PIEZO1Q92508 2521 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 A0A1B0GUL6 1792 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.73□□□□□ -1.33
PTPN4-210ENST00000485247 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.73□□□□□ -1.33
PTPN4-210ENST00000485247 TRIM43BA6NCK2 446 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 DNM1LO00429 736 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 ADAM23O75077 832 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 XYLBO75191 536 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 CPB1P15086 417 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 BRD2P25440 801 aaKnown RBP6.73□□□□□ -1.33
PTPN4-210ENST00000485247 CNGA1P29973 690 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 KCNQ1P51787 676 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 UBE4AQ14139 1066 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 TRIM60Q495X7 471 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 PERM1Q5SV97 790 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 CDC42EP5Q6NZY7 148 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 HHIPL2Q6UWX4 724 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 SLC39A5Q6ZMH5 540 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 FAM35AQ86V20 835 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 SOCS4Q8WXH5 440 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 TRIM43Q96BQ3 446 aaPredicted RBP6.73□□□□□ -1.33
PTPN4-210ENST00000485247 P2RX7Q99572 595 aaKnown RBP6.73□□□□□ -1.33
PTPN4-210ENST00000485247 PCGF6Q9BYE7 350 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 ASCC2Q9H1I8 757 aaPredicted RBP6.73□□□□□ -1.33
PTPN4-210ENST00000485247 PDLIM7Q9NR12 457 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 SEPT3Q9UH03 358 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 LRRFIP2Q9Y608 721 aaKnown RBP6.73□□□□□ -1.33
PTPN4-210ENST00000485247 PLXNB2O15031 1838 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 MAST3O60307 1309 aa6.73□□□□□ -1.33
PTPN4-210ENST00000485247 BDP1A6H8Y1 2624 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 SPDYE3A6NKU9 549 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 ZBTB39O15060 712 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 CTNND1O60716 968 aaKnown RBP6.72□□□□□ -1.33
PTPN4-210ENST00000485247 ITGB8P26012 769 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 SCNN1AP37088 669 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 GPLD1P80108 840 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 FOXO4P98177 505 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 ADGRE1Q14246 886 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 CCDC57Q2TAC2 916 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 GJC2Q5T442 439 aaPredicted RBP6.72□□□□□ -1.33
PTPN4-210ENST00000485247 CCDC30Q5VVM6 783 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 FBXO33Q7Z6M2 555 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 CCAR1Q8IX12 1150 aaKnown RBP6.72□□□□□ -1.33
PTPN4-210ENST00000485247 C8orf58Q8NAV2 365 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 LPAR1Q92633 364 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 USP40Q9NVE5 1235 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 DDX20Q9UHI6 824 aaKnown RBP6.72□□□□□ -1.33
PTPN4-210ENST00000485247 DAGLAQ9Y4D2 1042 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 MUC6Q6W4X9 2439 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 PTPRFP10586 1907 aa6.72□□□□□ -1.33
PTPN4-210ENST00000485247 A0A0A0MRY4 1105 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 GRXCR1A8MXD5 290 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 MMP20O60882 483 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 FURINP09958 794 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 RGS2P41220 211 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 HMGCS2P54868 508 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 SPP2Q13103 211 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 PABPC4Q13310 644 aaKnown RBP eCLIP6.71□□□□□ -1.34
PTPN4-210ENST00000485247 GRIK4Q16099 956 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 CAVIN4Q5BKX8 364 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 PRRT3Q5FWE3 981 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 LMBR1LQ6UX01 489 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 CCDC129Q6ZRS4 1044 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 HFE2Q6ZVN8 426 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 G2E3Q7L622 706 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 ZSCAN29Q8IWY8 852 aaPredicted RBP6.71□□□□□ -1.34
PTPN4-210ENST00000485247 GPRC5AQ8NFJ5 357 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 USP6NLQ92738 828 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 PUS3Q9BZE2 481 aaKnown RBP6.71□□□□□ -1.34
PTPN4-210ENST00000485247 MYH16Q9H6N6 1097 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 TXNRD2Q9NNW7 524 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 MORF4L1Q9UBU8 362 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 CLSPNQ9HAW4 1339 aa6.71□□□□□ -1.34
PTPN4-210ENST00000485247 DNAH12Q6ZR08 3092 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 ATRNL1Q5VV63 1379 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 SMIM22K7EJ46 135 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 MSCO60682 206 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 RGS9O75916 674 aaPredicted RBP6.7□□□□□ -1.34
PTPN4-210ENST00000485247 ZNF853P0CG23 659 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 RAG1P15918 1043 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 MAPK4P31152 587 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 RGS3P49796 1198 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 NRLP54845 237 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 IRX3P78415 501 aaPredicted RBP6.7□□□□□ -1.34
PTPN4-210ENST00000485247 TLE2Q04725 743 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 FPGSQ05932 587 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms