RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 PPP1R14AQ96A00 147 aa6.13□□□□□ -1.43
VPS13A-211ENST00000484581 ZCCHC4Q9H5U6 513 aa6.13□□□□□ -1.43
VPS13A-211ENST00000484581 SLC52A1Q9NWF4 448 aa6.13□□□□□ -1.43
VPS13A-211ENST00000484581 WHRNQ9P202 907 aa6.13□□□□□ -1.43
VPS13A-211ENST00000484581 CCDC194A0A1B0GVG4 234 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 SHISA3A0PJX4 238 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 OR14I1A6ND48 311 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 RFXAPO00287 272 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 PSPNO60542 156 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 PABPC1P11940 636 aaKnown RBP6.12□□□□□ -1.43
VPS13A-211ENST00000484581 BMP7P18075 431 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 SDSP20132 328 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 NMIQ13287 307 aaPredicted RBP6.12□□□□□ -1.43
VPS13A-211ENST00000484581 NSMFQ6X4W1 530 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 RNF111Q6ZNA4 994 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 SIRT2Q8IXJ6 389 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 AHI1Q8N157 1196 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 UBR7Q8N806 425 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 BVESQ8NE79 360 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 LINC01599Q8WXQ3 324 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 OSBP2Q969R2 916 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 CCDC136Q96JN2 1154 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 MRGPRX3Q96LB0 322 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 FGD4Q96M96 766 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 SGPP1Q9BX95 441 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 PCGF6Q9BYE7 350 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 MKRN2Q9H000 416 aaKnown RBP6.12□□□□□ -1.43
VPS13A-211ENST00000484581 TCEAL9Q9UHQ7 104 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 EID1Q9Y6B2 187 aa6.12□□□□□ -1.43
VPS13A-211ENST00000484581 NOP56O00567 594 aaKnown RBP6.11□□□□□ -1.43
VPS13A-211ENST00000484581 SHOXO15266 292 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 PRODHO43272 600 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 EFCAB14O75071 495 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 PPM1BO75688 479 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 DNAJC8O75937 253 aaPredicted RBP6.11□□□□□ -1.43
VPS13A-211ENST00000484581 NPTXRO95502 500 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 C6orf222P0C671 652 aaPredicted RBP6.11□□□□□ -1.43
VPS13A-211ENST00000484581 POU3F2P20265 443 aaPredicted RBP6.11□□□□□ -1.43
VPS13A-211ENST00000484581 HOXA5P20719 270 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 CD247P20963 164 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 EPHB1P54762 984 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 RNF4P78317 190 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 TCERG1LQ5VWI1 586 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 CNNM4Q6P4Q7 775 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 POMZP3Q6PJE2 187 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 WAPLQ7Z5K2 1190 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 TRIM59Q8IWR1 403 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 C7orf61Q8IZ16 206 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 SYTL5Q8TDW5 730 aaPredicted RBP6.11□□□□□ -1.43
VPS13A-211ENST00000484581 DDX1Q92499 740 aaKnown RBP6.11□□□□□ -1.43
VPS13A-211ENST00000484581 RELTQ969Z4 430 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 RCC1LQ96I51 464 aaKnown RBP6.11□□□□□ -1.43
VPS13A-211ENST00000484581 ZNF512BQ96KM6 892 aaPredicted RBP6.11□□□□□ -1.43
VPS13A-211ENST00000484581 TRIM39Q9HCM9 518 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 PARD6AQ9NPB6 346 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 GEMIN8Q9NWZ8 242 aaKnown RBP6.11□□□□□ -1.43
VPS13A-211ENST00000484581 EBF1Q9UH73 591 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 JAG2Q9Y219 1238 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 EMC9Q9Y3B6 208 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 KCTD3Q9Y597 815 aa6.11□□□□□ -1.43
VPS13A-211ENST00000484581 FAM83GA6ND36 823 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 ALDH1L1O75891 902 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 EYA4O95677 639 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 ITGA4P13612 1032 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 GRIA2P42262 883 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 GALK1P51570 392 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 TBX4P57082 545 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 GABREP78334 506 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 FAM50AQ14320 339 aaKnown RBP6.1□□□□□ -1.43
VPS13A-211ENST00000484581 ADGRF1Q5T601 910 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 NBPF12Q5TAG4 269 aaPredicted RBP6.1□□□□□ -1.43
VPS13A-211ENST00000484581 NECAB2Q7Z6G3 386 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 ADAT2Q7Z6V5 191 aaKnown RBP6.1□□□□□ -1.43
VPS13A-211ENST00000484581 TMEM151BQ8IW70 566 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 GSTCDQ8NEC7 633 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 ATL2Q8NHH9 583 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 SHISA4Q96DD7 197 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 C8orf48Q96LL4 319 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 SIRT5Q9NXA8 310 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 ZNF451Q9Y4E5 1061 aa6.1□□□□□ -1.43
VPS13A-211ENST00000484581 WASHC2CQ9Y4E1 1318 aa6.09□□□□□ -1.43
VPS13A-211ENST00000484581 A0A087WZG4 1122 aa6.09□□□□□ -1.43
VPS13A-211ENST00000484581 TBX1O43435 398 aa6.09□□□□□ -1.43
VPS13A-211ENST00000484581 GUCY2FP51841 1108 aa6.09□□□□□ -1.43
VPS13A-211ENST00000484581 PCBP3P57721 371 aaKnown RBP6.09□□□□□ -1.43
VPS13A-211ENST00000484581 SRSF3P84103 164 aaKnown RBP6.09□□□□□ -1.43
VPS13A-211ENST00000484581 TTF1Q15361 905 aaPredicted RBP6.09□□□□□ -1.43
VPS13A-211ENST00000484581 DDX46Q7L014 1031 aaKnown RBP6.09□□□□□ -1.43
VPS13A-211ENST00000484581 BRAPQ7Z569 592 aa6.09□□□□□ -1.43
VPS13A-211ENST00000484581 ARHGEF39Q8N4T4 335 aa6.09□□□□□ -1.43
VPS13A-211ENST00000484581 USHBP1Q8N6Y0 703 aa6.09□□□□□ -1.43
VPS13A-211ENST00000484581 DAGLBQ8NCG7 672 aa6.09□□□□□ -1.43
VPS13A-211ENST00000484581 VWCEQ96DN2 955 aa6.09□□□□□ -1.43
VPS13A-211ENST00000484581 G6PC3Q9BUM1 346 aa6.09□□□□□ -1.43
VPS13A-211ENST00000484581 LGR4Q9BXB1 951 aa6.09□□□□□ -1.43
VPS13A-211ENST00000484581 GP6Q9HCN6 339 aa6.09□□□□□ -1.43
VPS13A-211ENST00000484581 GCM1Q9NP62 436 aa6.09□□□□□ -1.43
VPS13A-211ENST00000484581 NDOR1Q9UHB4 597 aa6.09□□□□□ -1.43
VPS13A-211ENST00000484581 AKT3Q9Y243 479 aa6.09□□□□□ -1.43
VPS13A-211ENST00000484581 USP2O75604 605 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms