RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 B4DLN1 442 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 EDNRBP24530 442 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 CST5P28325 142 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-221ENST00000477561 MRPL12P52815 198 aaKnown RBP9.58□□□□□ -0.88
HDAC6-221ENST00000477561 EXOSC10Q01780 885 aaKnown RBP9.58□□□□□ -0.88
HDAC6-221ENST00000477561 SNX17Q15036 470 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 FSCN1Q16658 493 aaKnown RBP9.58□□□□□ -0.88
HDAC6-221ENST00000477561 TSGA10IPQ3SY00 556 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 DUSP28Q4G0W2 176 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 CXCL17Q6UXB2 119 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 SYNE3Q6ZMZ3 975 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 SEPT14Q6ZU15 432 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 DHX32Q7L7V1 743 aaKnown RBP9.58□□□□□ -0.88
HDAC6-221ENST00000477561 FCHSD1Q86WN1 690 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 MICU3Q86XE3 530 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 NSUN6Q8TEA1 469 aaKnown RBP9.58□□□□□ -0.88
HDAC6-221ENST00000477561 RRP36Q96EU6 259 aaKnown RBP9.58□□□□□ -0.88
HDAC6-221ENST00000477561 ZFP91Q96JP5 570 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-221ENST00000477561 GLT1D1Q96MS3 346 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 MAP3K14Q99558 947 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 BRPF3Q9ULD4 1205 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 NAP1L2Q9ULW6 460 aaPredicted RBP9.58□□□□□ -0.88
HDAC6-221ENST00000477561 SNX14Q9Y5W7 946 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 RANBP2P49792 3224 aaKnown RBP9.58□□□□□ -0.88
HDAC6-221ENST00000477561 LRRC37A2A6NM11 1700 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 LOC102724159A0A0B4J2E5 919 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 RBM47A0AV96 593 aaKnown RBP9.57□□□□□ -0.88
HDAC6-221ENST00000477561 TRIM43BA6NCK2 446 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 GCOM1H8Y6P7 765 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-221ENST00000477561 ARIH2O95376 493 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 POLR2MP0CAP2 368 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 CALM1P0DP23 149 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 CALM2P0DP24 149 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 CALM3P0DP25 149 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 TXNP10599 105 aaKnown RBP9.57□□□□□ -0.88
HDAC6-221ENST00000477561 MYCLP12524 364 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-221ENST00000477561 HSPA4P34932 840 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 FXR1P51114 621 aaKnown RBP eCLIP9.57□□□□□ -0.88
HDAC6-221ENST00000477561 HSD17B4P51659 736 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 PSMC6P62333 389 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 FGD1P98174 961 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 KRT32Q14532 448 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 PPP2R5BQ15173 497 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 PWP2Q15269 919 aaKnown RBP9.57□□□□□ -0.88
HDAC6-221ENST00000477561 STXBP2Q15833 593 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 C1orf53Q5VUE5 145 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 FANCBQ8NB91 859 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 OR6J1Q8NGC5 347 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 SCFD2Q8WU76 684 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 TRIM43Q96BQ3 446 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-221ENST00000477561 JAKMIP1Q96N16 626 aaKnown RBP9.57□□□□□ -0.88
HDAC6-221ENST00000477561 LBHD1Q9BQE6 289 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-221ENST00000477561 LZTS2Q9BRK4 669 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 SPZ1Q9BXG8 430 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 UBE2OQ9C0C9 1292 aaKnown RBP9.57□□□□□ -0.88
HDAC6-221ENST00000477561 PDLIM7Q9NR12 457 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 PXMP2Q9NR77 195 aa9.57□□□□□ -0.88
HDAC6-221ENST00000477561 SEC63Q9UGP8 760 aaKnown RBP9.57□□□□□ -0.88
HDAC6-221ENST00000477561 BAZ2BQ9UIF8 2168 aaKnown RBP9.57□□□□□ -0.88
HDAC6-221ENST00000477561 KLF18A0A0U1RQI7 1052 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 DCDC2CA8MYV0 355 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 ARVCFO00192 962 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 ZEB2O60315 1214 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 SORBS3O60504 671 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 REC8O95072 547 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 NR3C2P08235 984 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 MYL3P08590 195 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 CLTBP09497 229 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 ITGB8P26012 769 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 BMP8BP34820 402 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 GNAQP50148 359 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 NKX3-2P78367 333 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 FAAP100Q0VG06 881 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 TRAF1Q13077 416 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 TTLL4Q14679 1199 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 LY6KQ17RY6 165 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 APOA5Q6Q788 366 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 Q6ZUG5 572 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 TMTC3Q6ZXV5 915 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 SGMS1Q86VZ5 419 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 IL31RAQ8NI17 732 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 PPP1R13LQ8WUF5 828 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 BADQ92934 168 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 KCNB2Q92953 911 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 IWS1Q96ST2 819 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 MAF1Q9H063 256 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 TMEM39AQ9NV64 488 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 Q9Y3F1 56 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 MYH6P13533 1939 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 ELP1O95163 1332 aa9.56□□□□□ -0.88
HDAC6-221ENST00000477561 A0A0U1RQG5 324 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-221ENST00000477561 GOLGA8AA7E2F4 631 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 GOLGA8BA8MQT2 603 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 ZBTB43O43298 467 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 EIF3JO75822 258 aaKnown RBP9.55□□□□□ -0.88
HDAC6-221ENST00000477561 HMGB1P09429 215 aaKnown RBP9.55□□□□□ -0.88
HDAC6-221ENST00000477561 SMARCA1P28370 1054 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 ANP32AP39687 249 aaKnown RBP9.55□□□□□ -0.88
HDAC6-221ENST00000477561 CDK7P50613 346 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 CHMP4BP1P59074 171 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 224.3 ms