RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 NUP88Q99567 741 aaPredicted RBP8.35□□□□□ -1.07
LRCH3-215ENST00000476664 DDX21Q9NR30 783 aaKnown RBP eCLIP8.35□□□□□ -1.07
LRCH3-215ENST00000476664 LRRC4BQ9NT99 713 aa8.35□□□□□ -1.07
LRCH3-215ENST00000476664 KLHL11Q9NVR0 708 aa8.35□□□□□ -1.07
LRCH3-215ENST00000476664 STK32BQ9NY57 414 aa8.35□□□□□ -1.07
LRCH3-215ENST00000476664 ZBTB21Q9ULJ3 1066 aa8.35□□□□□ -1.07
LRCH3-215ENST00000476664 PHTF1Q9UMS5 762 aa8.35□□□□□ -1.07
LRCH3-215ENST00000476664 KANK1Q14678 1352 aa8.35□□□□□ -1.07
LRCH3-215ENST00000476664 ARHGEF28Q8N1W1 1705 aaKnown RBP8.34□□□□□ -1.07
LRCH3-215ENST00000476664 USP19O94966 1318 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 NOP56O00567 594 aaKnown RBP8.34□□□□□ -1.07
LRCH3-215ENST00000476664 DNAJA2O60884 412 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 EPHX1P07099 455 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 FAM163BP0C2L3 166 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 RHOQP17081 205 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 TYRP1P17643 537 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 PTPRAP18433 802 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 LPOP22079 712 aaPredicted RBP8.34□□□□□ -1.07
LRCH3-215ENST00000476664 IL2P60568 153 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 ADCY1Q08828 1119 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 SPEM2Q0P670 501 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 BIRC3Q13489 604 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 NEUROD1Q13562 356 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 PIK3R6Q5UE93 754 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 CEP135Q66GS9 1140 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 MPRIPQ6WCQ1 1025 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 MAMDC2Q7Z304 686 aaPredicted RBP8.34□□□□□ -1.07
LRCH3-215ENST00000476664 VN1R5Q7Z5H4 357 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 PNMA8AQ86V59 439 aaPredicted RBP8.34□□□□□ -1.07
LRCH3-215ENST00000476664 CBARPQ8N350 705 aaPredicted RBP8.34□□□□□ -1.07
LRCH3-215ENST00000476664 BHMTQ93088 406 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 HAUS7Q99871 368 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 GBP3Q9H0R5 595 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 SUSD2Q9UGT4 822 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 SOX13Q9UN79 622 aa8.34□□□□□ -1.07
LRCH3-215ENST00000476664 COL14A1Q05707 1796 aaKnown RBP8.34□□□□□ -1.07
LRCH3-215ENST00000476664 SBF2Q86WG5 1849 aa8.33□□□□□ -1.08
LRCH3-215ENST00000476664 ULK1O75385 1050 aa8.33□□□□□ -1.08
LRCH3-215ENST00000476664 CFBP00751 764 aa8.33□□□□□ -1.08
LRCH3-215ENST00000476664 LTFP02788 710 aa8.33□□□□□ -1.08
LRCH3-215ENST00000476664 RGS19P49795 217 aa8.33□□□□□ -1.08
LRCH3-215ENST00000476664 KRT85P78386 507 aa8.33□□□□□ -1.08
LRCH3-215ENST00000476664 LRFN4Q6PJG9 635 aa8.33□□□□□ -1.08
LRCH3-215ENST00000476664 FAM186BQ8IYM0 893 aa8.33□□□□□ -1.08
LRCH3-215ENST00000476664 CRACR2BQ8N4Y2 399 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-215ENST00000476664 GPBAR1Q8TDU6 330 aa8.33□□□□□ -1.08
LRCH3-215ENST00000476664 ELMO3Q96BJ8 720 aa8.33□□□□□ -1.08
LRCH3-215ENST00000476664 OTUD5Q96G74 571 aa8.33□□□□□ -1.08
LRCH3-215ENST00000476664 C1orf112Q9NSG2 853 aa8.33□□□□□ -1.08
LRCH3-215ENST00000476664 SAP30BPQ9UHR5 308 aaKnown RBP8.33□□□□□ -1.08
LRCH3-215ENST00000476664 DYRK1BQ9Y463 629 aa8.33□□□□□ -1.08
LRCH3-215ENST00000476664 PCDHGC4Q9Y5F7 938 aa8.33□□□□□ -1.08
LRCH3-215ENST00000476664 SPATA31A1Q5TZJ5 1347 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 WASHC2AQ641Q2 1341 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 RRBP1Q9P2E9 1410 aaKnown RBP8.32□□□□□ -1.08
LRCH3-215ENST00000476664 A0A087WZG4 1122 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 TCRBV16S1A1N1A0A5B0 115 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 PRRT4C9JH25 899 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 M0R2C6 588 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 PMM2O15305 246 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 ITGBL1O95965 494 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-215ENST00000476664 MT-CO1P00395 513 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 ESRRAP11474 423 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-215ENST00000476664 SELPP16109 830 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 IARSP41252 1262 aaKnown RBP8.32□□□□□ -1.08
LRCH3-215ENST00000476664 AK2P54819 239 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 RBM10P98175 930 aaKnown RBP8.32□□□□□ -1.08
LRCH3-215ENST00000476664 POU5F1Q01860 360 aaKnown RBP8.32□□□□□ -1.08
LRCH3-215ENST00000476664 RASSF7Q02833 373 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 KLF1Q13351 362 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-215ENST00000476664 INPP5AQ14642 412 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 KCTD2Q14681 263 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 ZCCHC8Q6NZY4 707 aaKnown RBP8.32□□□□□ -1.08
LRCH3-215ENST00000476664 MMS22LQ6ZRQ5 1243 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 DDX53Q86TM3 631 aaKnown RBP8.32□□□□□ -1.08
LRCH3-215ENST00000476664 BVESQ8NE79 360 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 ACRBPQ8NEB7 543 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 TRMT2BQ96GJ1 504 aaKnown RBP8.32□□□□□ -1.08
LRCH3-215ENST00000476664 SCLYQ96I15 445 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 SLC6A18Q96N87 628 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 GTF2IRD1Q9UHL9 959 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 DMTF1Q9Y222 760 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 MRFAP1Q9Y605 127 aa8.32□□□□□ -1.08
LRCH3-215ENST00000476664 MORC2Q9Y6X9 1032 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-215ENST00000476664 J3QW42 95 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 TCERG1O14776 1098 aaKnown RBP8.31□□□□□ -1.08
LRCH3-215ENST00000476664 NBNO60934 754 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 CAPNS1P04632 268 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 TP53P04637 393 aaPredicted RBP8.31□□□□□ -1.08
LRCH3-215ENST00000476664 ASGR2P07307 311 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 SETSIPP0DME0 302 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 NAT1P18440 290 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 DDIT3P35638 169 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 GRIA2P42262 883 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 CCT5P48643 541 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 YARSP54577 528 aaKnown RBP8.31□□□□□ -1.08
LRCH3-215ENST00000476664 OCRLQ01968 901 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 SIM2Q14190 667 aaPredicted RBP8.31□□□□□ -1.08
LRCH3-215ENST00000476664 SLC4A8Q2Y0W8 1093 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 INAVAQ3KP66 663 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms