RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 TBC1D32Q96NH3 1257 aa4.24□□□□□ -1.73
LSM2-211ENST00000475835 TUBA1CQ9BQE3 449 aa4.24□□□□□ -1.73
LSM2-211ENST00000475835 CENPOQ9BU64 300 aa4.24□□□□□ -1.73
LSM2-211ENST00000475835 PLVAPQ9BX97 442 aa4.24□□□□□ -1.73
LSM2-211ENST00000475835 GOLPH3LQ9H4A5 285 aa4.24□□□□□ -1.73
LSM2-211ENST00000475835 C8orf33Q9H7E9 229 aaPredicted RBP4.24□□□□□ -1.73
LSM2-211ENST00000475835 PPCSQ9HAB8 311 aa4.24□□□□□ -1.73
LSM2-211ENST00000475835 C12orf10Q9HB07 376 aa4.24□□□□□ -1.73
LSM2-211ENST00000475835 SLC5A4Q9NY91 659 aa4.24□□□□□ -1.73
LSM2-211ENST00000475835 SUCLA2Q9P2R7 463 aaPredicted RBP4.24□□□□□ -1.73
LSM2-211ENST00000475835 AGO2Q9UKV8 859 aaKnown RBP4.24□□□□□ -1.73
LSM2-211ENST00000475835 INTUQ9ULD6 942 aa4.24□□□□□ -1.73
LSM2-211ENST00000475835 ZMYND8Q9ULU4 1186 aaPredicted RBP4.24□□□□□ -1.73
LSM2-211ENST00000475835 GTF2A1LQ9UNN4 478 aa4.24□□□□□ -1.73
LSM2-211ENST00000475835 MRPS23Q9Y3D9 190 aaKnown RBP4.24□□□□□ -1.73
LSM2-211ENST00000475835 ATP6V1DQ9Y5K8 247 aa4.24□□□□□ -1.73
LSM2-211ENST00000475835 EID1Q9Y6B2 187 aa4.24□□□□□ -1.73
LSM2-211ENST00000475835 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.24□□□□□ -1.73
LSM2-211ENST00000475835 ZC3H13Q5T200 1668 aaKnown RBP4.24□□□□□ -1.73
LSM2-211ENST00000475835 ATP10AO60312 1499 aa4.24□□□□□ -1.73
LSM2-211ENST00000475835 ATP10BO94823 1461 aa4.24□□□□□ -1.73
LSM2-211ENST00000475835 NKTRP30414 1462 aaKnown RBP4.24□□□□□ -1.73
LSM2-211ENST00000475835 IFT172Q9UG01 1749 aa4.24□□□□□ -1.73
LSM2-211ENST00000475835 RTEL1-TNFRSF6BF6WH68 1400 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 TRPM2O94759 1503 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 HTR3EA5X5Y0 456 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 PLOD2O00469 737 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 ENPP3O14638 875 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 CETN3O15182 167 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 NVLO15381 856 aaKnown RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 TLR3O15455 904 aaKnown RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 ASAP2O43150 1006 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 RASA4O43374 803 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 KLHL41O60662 606 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 ZC3H11AO75152 810 aaKnown RBP eCLIP4.23□□□□□ -1.73
LSM2-211ENST00000475835 DDHD2O94830 711 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 SLU7O95391 586 aaKnown RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 NPTXRO95502 500 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 RECKO95980 971 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 MBD3O95983 291 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 ABL1P00519 1130 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 POTEJP0CG39 1038 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 SRGNP10124 158 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 PDE6BP35913 854 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 MTHFRP42898 656 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 GNAQP50148 359 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 SERPINB8P50452 374 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 RCAN1P53805 252 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 MRPS15P82914 257 aaKnown RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 DAB2P98082 770 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 GSTM4Q03013 218 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 UBXN1Q04323 297 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 NFX1Q12986 1120 aaKnown RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 MKRN4PQ13434 485 aaPredicted RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 ITGA7Q13683 1181 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 MORC3Q14149 939 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 NDUFA5Q16718 116 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 ZSCAN23Q3MJ62 389 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 RILPL1Q5EBL4 403 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 CEP78Q5JTW2 689 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 FKBP15Q5T1M5 1219 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 INTS3Q68E01 1043 aaKnown RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 SWSAP1Q6NVH7 229 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 HIBCHQ6NVY1 386 aaPredicted RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 C16orf54Q6UWD8 224 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 BTNL9Q6UXG8 535 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 TBC1D9Q6ZT07 1266 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 BTN2A1Q7KYR7 527 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 SRGAP1Q7Z6B7 1085 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 MRPL10Q7Z7H8 261 aaKnown RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 LRRTM3Q86VH5 581 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 IFNL1Q8IU54 200 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 SPATA2LQ8IUW3 424 aaPredicted RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 FAM186BQ8IYM0 893 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 SCYL3Q8IZE3 742 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 OR8H2Q8N162 312 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 VPS52Q8N1B4 723 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 SCAIQ8N9R8 606 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 GOLM1Q8NBJ4 401 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 FNIP1Q8TF40 1166 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.23□□□□□ -1.73
LSM2-211ENST00000475835 DYDC1Q8WWB3 177 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 MAIP1Q8WWC4 291 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 IPCEF1Q8WWN9 437 aaPredicted RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 IRGQQ8WZA9 623 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 GLMNQ92990 594 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 ATP6V1E2Q96A05 226 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 ITPKCQ96DU7 683 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 CEP295NLQ96MC4 621 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 TSGA13Q96PP4 275 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 TRAPPC9Q96Q05 1148 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 MTMR9Q96QG7 549 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 PRPF18Q99633 342 aaKnown RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 HNRNPABQ99729 332 aaKnown RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 ALG1Q9BT22 464 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 PUS3Q9BZE2 481 aaKnown RBP4.23□□□□□ -1.73
LSM2-211ENST00000475835 DRC3Q9H069 523 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 CSRNP2Q9H175 543 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 VPS16Q9H269 839 aa4.23□□□□□ -1.73
LSM2-211ENST00000475835 NCOR1P1Q9H4R4 102 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms