RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 NSUN6Q8TEA1 469 aaKnown RBP24.34■■□□□ 1.49
SREBF1-210ENST00000471445 PIGSQ96S52 555 aa24.34■■□□□ 1.49
SREBF1-210ENST00000471445 MAP3K14Q99558 947 aa24.34■■□□□ 1.49
SREBF1-210ENST00000471445 SH2B2O14492 632 aaPredicted RBP24.33■■□□□ 1.49
SREBF1-210ENST00000471445 PRC1O43663 620 aa24.33■■□□□ 1.49
SREBF1-210ENST00000471445 CD4P01730 458 aa24.33■■□□□ 1.49
SREBF1-210ENST00000471445 C9orf50Q5SZB4 431 aa24.33■■□□□ 1.49
SREBF1-210ENST00000471445 CASC1Q6TDU7 716 aa24.33■■□□□ 1.49
SREBF1-210ENST00000471445 ZNF654Q8IZM8 581 aa24.33■■□□□ 1.49
SREBF1-210ENST00000471445 TMEM87BQ96K49 555 aa24.33■■□□□ 1.49
SREBF1-210ENST00000471445 RMDN3Q96TC7 470 aa24.33■■□□□ 1.49
SREBF1-210ENST00000471445 GPHNQ9NQX3 736 aaPredicted RBP24.33■■□□□ 1.49
SREBF1-210ENST00000471445 PCDHA1Q9Y5I3 950 aa24.33■■□□□ 1.49
SREBF1-210ENST00000471445 GRIN2DO15399 1336 aa24.33■■□□□ 1.48
SREBF1-210ENST00000471445 TLR3O15455 904 aaKnown RBP24.32■■□□□ 1.48
SREBF1-210ENST00000471445 ARIH2O95376 493 aa24.32■■□□□ 1.48
SREBF1-210ENST00000471445 CFBP00751 764 aa24.32■■□□□ 1.48
SREBF1-210ENST00000471445 MCM5P33992 734 aa24.32■■□□□ 1.48
SREBF1-210ENST00000471445 CPT1AP50416 773 aa24.32■■□□□ 1.48
SREBF1-210ENST00000471445 ITGA7Q13683 1181 aa24.32■■□□□ 1.48
SREBF1-210ENST00000471445 SHHQ15465 462 aa24.32■■□□□ 1.48
SREBF1-210ENST00000471445 IWS1Q96ST2 819 aa24.32■■□□□ 1.48
SREBF1-210ENST00000471445 SEZ6LQ9BYH1 1024 aa24.32■■□□□ 1.48
SREBF1-210ENST00000471445 MAP3K20Q9NYL2 800 aaKnown RBP24.32■■□□□ 1.48
SREBF1-210ENST00000471445 CDC45O75419 566 aa24.31■■□□□ 1.48
SREBF1-210ENST00000471445 TIMP1P01033 207 aa24.31■■□□□ 1.48
SREBF1-210ENST00000471445 PURAQ00577 322 aaKnown RBP24.31■■□□□ 1.48
SREBF1-210ENST00000471445 FPGSQ05932 587 aa24.31■■□□□ 1.48
SREBF1-210ENST00000471445 TTLL4Q14679 1199 aa24.31■■□□□ 1.48
SREBF1-210ENST00000471445 SAMD3Q8N6K7 520 aa24.31■■□□□ 1.48
SREBF1-210ENST00000471445 COPS5Q92905 334 aa24.31■■□□□ 1.48
SREBF1-210ENST00000471445 MYL10Q9BUA6 226 aa24.31■■□□□ 1.48
SREBF1-210ENST00000471445 PXMP2Q9NR77 195 aa24.31■■□□□ 1.48
SREBF1-210ENST00000471445 POLR3EQ9NVU0 708 aa24.31■■□□□ 1.48
SREBF1-210ENST00000471445 TXNP10599 105 aaKnown RBP24.3■■□□□ 1.48
SREBF1-210ENST00000471445 EIF2AK2P19525 551 aaKnown RBP24.3■■□□□ 1.48
SREBF1-210ENST00000471445 EPHB4P54760 987 aa24.3■■□□□ 1.48
SREBF1-210ENST00000471445 PSMC6P62333 389 aa24.3■■□□□ 1.48
SREBF1-210ENST00000471445 TRAF1Q13077 416 aa24.3■■□□□ 1.48
SREBF1-210ENST00000471445 CCDC62Q6P9F0 684 aa24.3■■□□□ 1.48
SREBF1-210ENST00000471445 CTCFLQ8NI51 663 aaPredicted RBP24.3■■□□□ 1.48
SREBF1-210ENST00000471445 PNMA6FA0A0J9YX94 578 aa24.29■■□□□ 1.48
SREBF1-210ENST00000471445 LIFRP42702 1097 aa24.29■■□□□ 1.48
SREBF1-210ENST00000471445 STXBP2Q15833 593 aa24.29■■□□□ 1.48
SREBF1-210ENST00000471445 ARHGEF16Q5VV41 709 aa24.29■■□□□ 1.48
SREBF1-210ENST00000471445 CCDC136Q96JN2 1154 aa24.29■■□□□ 1.48
SREBF1-210ENST00000471445 SPZ1Q9BXG8 430 aa24.29■■□□□ 1.48
SREBF1-210ENST00000471445 MYH7BA7E2Y1 1941 aa24.29■■□□□ 1.48
SREBF1-210ENST00000471445 A6NJR5 290 aa24.28■■□□□ 1.48
SREBF1-210ENST00000471445 KIF5BP33176 963 aa24.28■■□□□ 1.48
SREBF1-210ENST00000471445 RNF20Q5VTR2 975 aa24.28■■□□□ 1.48
SREBF1-210ENST00000471445 MFSD5Q6N075 450 aa24.28■■□□□ 1.48
SREBF1-210ENST00000471445 TMTC2Q8N394 836 aa24.28■■□□□ 1.48
SREBF1-210ENST00000471445 PDCD2LQ9BRP1 358 aa24.28■■□□□ 1.48
SREBF1-210ENST00000471445 NR3C2P08235 984 aa24.27■■□□□ 1.48
SREBF1-210ENST00000471445 MYL3P08590 195 aa24.27■■□□□ 1.48
SREBF1-210ENST00000471445 SMARCA1P28370 1054 aa24.27■■□□□ 1.48
SREBF1-210ENST00000471445 BRDTQ58F21 947 aaPredicted RBP24.27■■□□□ 1.48
SREBF1-210ENST00000471445 SEPT14Q6ZU15 432 aa24.27■■□□□ 1.48
SREBF1-210ENST00000471445 MTG1Q9BT17 334 aaPredicted RBP24.27■■□□□ 1.48
SREBF1-210ENST00000471445 TANC1Q9C0D5 1861 aa24.27■■□□□ 1.48
SREBF1-210ENST00000471445 CCDC69A6NI79 296 aa24.26■■□□□ 1.47
SREBF1-210ENST00000471445 B4GALT4O60513 344 aa24.26■■□□□ 1.47
SREBF1-210ENST00000471445 HOXA13P31271 388 aaPredicted RBP24.26■■□□□ 1.47
SREBF1-210ENST00000471445 NFXL1Q6ZNB6 911 aa24.26■■□□□ 1.47
SREBF1-210ENST00000471445 PPP1R12CQ9BZL4 782 aa24.26■■□□□ 1.47
SREBF1-210ENST00000471445 GCOM1H8Y6P7 765 aaPredicted RBP24.25■■□□□ 1.47
SREBF1-210ENST00000471445 KPNA6O60684 536 aa24.25■■□□□ 1.47
SREBF1-210ENST00000471445 EIF3JO75822 258 aaKnown RBP24.25■■□□□ 1.47
SREBF1-210ENST00000471445 GH1P01241 217 aa24.25■■□□□ 1.47
SREBF1-210ENST00000471445 POLR2MP0CAP2 368 aa24.25■■□□□ 1.47
SREBF1-210ENST00000471445 ARHGAP1Q07960 439 aa24.25■■□□□ 1.47
SREBF1-210ENST00000471445 PGM5Q15124 567 aa24.25■■□□□ 1.47
SREBF1-210ENST00000471445 Q7L0L9 218 aa24.25■■□□□ 1.47
SREBF1-210ENST00000471445 DEFB123Q8N688 67 aa24.25■■□□□ 1.47
SREBF1-210ENST00000471445 LZTS2Q9BRK4 669 aa24.25■■□□□ 1.47
SREBF1-210ENST00000471445 LRRC2Q9BYS8 371 aa24.25■■□□□ 1.47
SREBF1-210ENST00000471445 ALDH8A1Q9H2A2 487 aaPredicted RBP24.25■■□□□ 1.47
SREBF1-210ENST00000471445 FRMPD4Q14CM0 1322 aa24.25■■□□□ 1.47
SREBF1-210ENST00000471445 PLEKHA8P1O95397 391 aa24.24■■□□□ 1.47
SREBF1-210ENST00000471445 CALM1P0DP23 149 aa24.24■■□□□ 1.47
SREBF1-210ENST00000471445 CALM2P0DP24 149 aa24.24■■□□□ 1.47
SREBF1-210ENST00000471445 CALM3P0DP25 149 aa24.24■■□□□ 1.47
SREBF1-210ENST00000471445 RXRAP19793 462 aa24.24■■□□□ 1.47
SREBF1-210ENST00000471445 GNAQP50148 359 aa24.24■■□□□ 1.47
SREBF1-210ENST00000471445 PPIGQ13427 754 aaKnown RBP eCLIP24.24■■□□□ 1.474e-7■■■□□ 15.2
SREBF1-210ENST00000471445 LY6KQ17RY6 165 aa24.24■■□□□ 1.47
SREBF1-210ENST00000471445 SGMS1Q86VZ5 419 aa24.24■■□□□ 1.47
SREBF1-210ENST00000471445 IL31RAQ8NI17 732 aa24.24■■□□□ 1.47
SREBF1-210ENST00000471445 RNPC3Q96LT9 517 aaKnown RBP24.24■■□□□ 1.47
SREBF1-210ENST00000471445 DDX41Q9UJV9 622 aaKnown RBP24.24■■□□□ 1.47
SREBF1-210ENST00000471445 MMP3P08254 477 aa24.23■■□□□ 1.47
SREBF1-210ENST00000471445 TSGA10IPQ3SY00 556 aa24.23■■□□□ 1.47
SREBF1-210ENST00000471445 FAM109BQ6ICB4 259 aaPredicted RBP24.23■■□□□ 1.47
SREBF1-210ENST00000471445 TMEM199Q8N511 208 aa24.23■■□□□ 1.47
SREBF1-210ENST00000471445 PIBF1Q8WXW3 757 aa24.23■■□□□ 1.47
SREBF1-210ENST00000471445 EMID1Q96A84 441 aaPredicted RBP24.23■■□□□ 1.47
SREBF1-210ENST00000471445 RRP36Q96EU6 259 aaKnown RBP24.23■■□□□ 1.47
SREBF1-210ENST00000471445 NEK1Q96PY6 1258 aa24.23■■□□□ 1.47
SREBF1-210ENST00000471445 NOC4LQ9BVI4 516 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms