RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 PDIA5Q14554 519 aa22.8■■□□□ 1.24
TUBGCP3-204ENST00000464139 USP17L6PQ6QN14 398 aa22.8■■□□□ 1.24
TUBGCP3-204ENST00000464139 HAS1Q92839 578 aa22.8■■□□□ 1.24
TUBGCP3-204ENST00000464139 RAB34Q9BZG1 259 aa22.8■■□□□ 1.24
TUBGCP3-204ENST00000464139 MRFAP1Q9Y605 127 aa22.8■■□□□ 1.24
TUBGCP3-204ENST00000464139 C10orf71Q711Q0 1435 aa22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 SIPA1L1O43166 1804 aa22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 BICDL2A1A5D9 508 aa22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 H0YIN7 160 aa22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 SLC1A4P43007 532 aa22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 SEPT2Q15019 361 aa22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 QRICH1Q2TAL8 776 aa22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 KRT79Q5XKE5 535 aa22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 PPP4R3AQ6IN85 833 aa22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 CNNM4Q6P4Q7 775 aa22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 NOC3LQ8WTT2 800 aaKnown RBP22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 CNOT6LQ96LI5 555 aaKnown RBP22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 DHX36Q9H2U1 1008 aaKnown RBP22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 PI4KBQ9UBF8 816 aa22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 STK17AQ9UEE5 414 aa22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 DDX41Q9UJV9 622 aaKnown RBP22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 SLX4Q8IY92 1834 aa22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 NKRFO15226 690 aaKnown RBP eCLIP22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 SEMA6BQ9H3T3 888 aa22.79■■□□□ 1.24
TUBGCP3-204ENST00000464139 ECM1Q16610 540 aa22.78■■□□□ 1.24
TUBGCP3-204ENST00000464139 SLFN13Q68D06 897 aa22.78■■□□□ 1.24
TUBGCP3-204ENST00000464139 RAD54LQ92698 747 aa22.78■■□□□ 1.24
TUBGCP3-204ENST00000464139 SLF1Q9BQI6 1058 aa22.78■■□□□ 1.24
TUBGCP3-204ENST00000464139 PRDM10Q9NQV6 1147 aa22.78■■□□□ 1.24
TUBGCP3-204ENST00000464139 A0A1W2PQC6 194 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 KIF5CO60282 957 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 MARCH6O60337 910 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 GDF11O95390 407 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 H2AFXP16104 143 aaPredicted RBP22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 ZNF569Q5MCW4 686 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 SIAH1Q8IUQ4 282 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 IDI2Q9BXS1 227 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 TRIM34Q9BYJ4 488 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 OGFRQ9NZT2 677 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 LUC7L2Q9Y383 392 aaKnown RBP22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 KLK7P49862 253 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 DNM2P50570 870 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 SNAP25P60880 206 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 PPP2R3AQ06190 1150 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 AOC3Q16853 763 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 EPC1Q9H2F5 836 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 KANSL2Q9H9L4 492 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 PCDHA1Q9Y5I3 950 aa22.77■■□□□ 1.24
TUBGCP3-204ENST00000464139 EFCAB8A8MWE9 144 aa22.76■■□□□ 1.23
TUBGCP3-204ENST00000464139 IDEP14735 1019 aa22.76■■□□□ 1.23
TUBGCP3-204ENST00000464139 MTIF2P46199 727 aaKnown RBP22.76■■□□□ 1.23
TUBGCP3-204ENST00000464139 UNC13DQ70J99 1090 aa22.76■■□□□ 1.23
TUBGCP3-204ENST00000464139 OR8K1Q8NGG5 319 aa22.76■■□□□ 1.23
TUBGCP3-204ENST00000464139 MKL1Q969V6 931 aa22.76■■□□□ 1.23
TUBGCP3-204ENST00000464139 MRIQ9BWK5 157 aa22.76■■□□□ 1.23
TUBGCP3-204ENST00000464139 ZNF446Q9NWS9 450 aa22.76■■□□□ 1.23
TUBGCP3-204ENST00000464139 ATF5Q9Y2D1 282 aaPredicted RBP22.76■■□□□ 1.23
TUBGCP3-204ENST00000464139 TDRD3Q9H7E2 651 aaKnown RBP22.76■■□□□ 1.23
TUBGCP3-204ENST00000464139 NYAP2Q9P242 653 aa22.76■■□□□ 1.23
TUBGCP3-204ENST00000464139 TBC1D8BQ0IIM8 1120 aa22.75■■□□□ 1.23
TUBGCP3-204ENST00000464139 CDC37Q16543 378 aaPredicted RBP22.75■■□□□ 1.23
TUBGCP3-204ENST00000464139 CAPN11Q9UMQ6 739 aa22.75■■□□□ 1.23
TUBGCP3-204ENST00000464139 ICA1Q05084 483 aa22.75■■□□□ 1.23
TUBGCP3-204ENST00000464139 TMEM119Q4V9L6 283 aa22.75■■□□□ 1.23
TUBGCP3-204ENST00000464139 STYK1Q6J9G0 422 aa22.75■■□□□ 1.23
TUBGCP3-204ENST00000464139 DDX12PQ92771 950 aa22.75■■□□□ 1.23
TUBGCP3-204ENST00000464139 NOC4LQ9BVI4 516 aaKnown RBP22.75■■□□□ 1.23
TUBGCP3-204ENST00000464139 PCDHA12Q9UN75 941 aa22.75■■□□□ 1.23
TUBGCP3-204ENST00000464139 PVALEFA0A1B0GWK0 134 aa22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 RASSF10A6NK89 507 aa22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 CLCN6P51797 869 aa22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 CENPPQ6IPU0 288 aa22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 TATDN1Q6P1N9 297 aa22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 DCAF4Q8WV16 495 aa22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 DNAJC7Q99615 494 aa22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 AGPAT5Q9NUQ2 364 aa22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 EPN1Q9Y6I3 576 aaPredicted RBP22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 PPP1R2P41236 205 aa22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 ARHGAP25P42331 645 aa22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 HDLBPQ00341 1268 aaKnown RBP22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 MIIPQ5JXC2 388 aa22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 WDR59Q6PJI9 974 aa22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 FAM114A1Q8IWE2 563 aa22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 SLC35F6Q8N357 371 aa22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 GLIS3Q8NEA6 775 aa22.74■■□□□ 1.23
TUBGCP3-204ENST00000464139 FKBP1AP62942 108 aaKnown RBP22.73■■□□□ 1.23
TUBGCP3-204ENST00000464139 LRRC41Q15345 812 aa22.73■■□□□ 1.23
TUBGCP3-204ENST00000464139 COBLL1Q53SF7 1204 aa22.73■■□□□ 1.23
TUBGCP3-204ENST00000464139 GTPBP4Q9BZE4 634 aaKnown RBP22.73■■□□□ 1.23
TUBGCP3-204ENST00000464139 F5H6K3 240 aa22.73■■□□□ 1.23
TUBGCP3-204ENST00000464139 NDUFA10O95299 355 aa22.73■■□□□ 1.23
TUBGCP3-204ENST00000464139 TRIM21P19474 475 aaKnown RBP22.73■■□□□ 1.23
TUBGCP3-204ENST00000464139 JAG1P78504 1218 aa22.73■■□□□ 1.23
TUBGCP3-204ENST00000464139 KLRC3Q07444 240 aa22.73■■□□□ 1.23
TUBGCP3-204ENST00000464139 ZNF772Q68DY9 489 aaPredicted RBP22.73■■□□□ 1.23
TUBGCP3-204ENST00000464139 PCMTD1Q96MG8 357 aaPredicted RBP22.73■■□□□ 1.23
TUBGCP3-204ENST00000464139 SERPINA10Q9UK55 444 aa22.73■■□□□ 1.23
TUBGCP3-204ENST00000464139 REXO2Q9Y3B8 237 aaKnown RBP22.73■■□□□ 1.23
TUBGCP3-204ENST00000464139 ARFGEF1Q9Y6D6 1849 aa22.72■■□□□ 1.23
TUBGCP3-204ENST00000464139 ABCB5Q2M3G0 1257 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms