RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 SEC63Q9UGP8 760 aaKnown RBP20.46■□□□□ 0.87
SF1-212ENST00000463343 DDX49Q9Y6V7 483 aaKnown RBP20.46■□□□□ 0.87
SF1-212ENST00000463343 CNTNAP5Q8WYK1 1306 aa20.46■□□□□ 0.87
SF1-212ENST00000463343 SYNGAP1Q96PV0 1343 aa20.46■□□□□ 0.87
SF1-212ENST00000463343 ZNF865P0CJ78 1059 aaPredicted RBP20.45■□□□□ 0.86
SF1-212ENST00000463343 GHRHRQ02643 423 aa20.45■□□□□ 0.86
SF1-212ENST00000463343 LRRC41Q15345 812 aa20.45■□□□□ 0.86
SF1-212ENST00000463343 NTRK3Q16288 839 aa20.45■□□□□ 0.86
SF1-212ENST00000463343 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.45■□□□□ 0.86
SF1-212ENST00000463343 COL20A1Q9P218 1284 aa20.45■□□□□ 0.86
SF1-212ENST00000463343 TPCN1Q9ULQ1 816 aa20.45■□□□□ 0.86
SF1-212ENST00000463343 PLXNA1Q9UIW2 1896 aa20.45■□□□□ 0.86
SF1-212ENST00000463343 MYH6P13533 1939 aa20.45■□□□□ 0.86
SF1-212ENST00000463343 LTBP2Q14767 1821 aa20.44■□□□□ 0.86
SF1-212ENST00000463343 ASB14A6NK59 587 aa20.44■□□□□ 0.86
SF1-212ENST00000463343 CFBP00751 764 aa20.44■□□□□ 0.86
SF1-212ENST00000463343 HSD17B4P51659 736 aa20.44■□□□□ 0.86
SF1-212ENST00000463343 ARMCX2Q7L311 632 aa20.44■□□□□ 0.86
SF1-212ENST00000463343 TAAR1Q96RJ0 339 aa20.44■□□□□ 0.86
SF1-212ENST00000463343 BACH2Q9BYV9 841 aa20.44■□□□□ 0.86
SF1-212ENST00000463343 ADD3Q9UEY8 706 aaKnown RBP20.44■□□□□ 0.86
SF1-212ENST00000463343 ATP11BQ9Y2G3 1177 aa20.44■□□□□ 0.86
SF1-212ENST00000463343 ALDH5A1P51649 535 aaPredicted RBP20.43■□□□□ 0.86
SF1-212ENST00000463343 STK3Q13188 491 aa20.43■□□□□ 0.86
SF1-212ENST00000463343 ANKRD1Q15327 319 aa20.43■□□□□ 0.86
SF1-212ENST00000463343 MORC4Q8TE76 937 aa20.43■□□□□ 0.86
SF1-212ENST00000463343 GUCD1Q96NT3 240 aa20.43■□□□□ 0.86
SF1-212ENST00000463343 KATNBL1Q9H079 304 aa20.43■□□□□ 0.86
SF1-212ENST00000463343 MAP3K20Q9NYL2 800 aaKnown RBP20.43■□□□□ 0.86
SF1-212ENST00000463343 PHF24Q9UPV7 400 aa20.43■□□□□ 0.86
SF1-212ENST00000463343 CNPY2Q9Y2B0 182 aa20.43■□□□□ 0.86
SF1-212ENST00000463343 UNC80Q8N2C7 3258 aa20.43■□□□□ 0.86
SF1-212ENST00000463343 HOXA13P31271 388 aaPredicted RBP20.42■□□□□ 0.86
SF1-212ENST00000463343 ADCYAP1R1P41586 468 aa20.42■□□□□ 0.86
SF1-212ENST00000463343 ACVR2BQ13705 512 aa20.42■□□□□ 0.86
SF1-212ENST00000463343 SAMD3Q8N6K7 520 aa20.42■□□□□ 0.86
SF1-212ENST00000463343 DNERQ8NFT8 737 aa20.42■□□□□ 0.86
SF1-212ENST00000463343 GPKOWQ92917 476 aaPredicted RBP eCLIP20.42■□□□□ 0.868e-14■□□□□ 8.7
SF1-212ENST00000463343 ABHD16BQ9H3Z7 469 aa20.42■□□□□ 0.86
SF1-212ENST00000463343 LOC102724159A0A0B4J2E5 919 aa20.41■□□□□ 0.86
SF1-212ENST00000463343 GCOM1H8Y6P7 765 aaPredicted RBP20.41■□□□□ 0.86
SF1-212ENST00000463343 PRPF3O43395 683 aaKnown RBP20.41■□□□□ 0.86
SF1-212ENST00000463343 PFKFB2O60825 505 aa20.41■□□□□ 0.86
SF1-212ENST00000463343 POLR2MP0CAP2 368 aa20.41■□□□□ 0.86
SF1-212ENST00000463343 IFNAR1P17181 557 aa20.41■□□□□ 0.86
SF1-212ENST00000463343 PWP2Q15269 919 aaKnown RBP20.41■□□□□ 0.86
SF1-212ENST00000463343 SHHQ15465 462 aa20.41■□□□□ 0.86
SF1-212ENST00000463343 TRIM60Q495X7 471 aa20.41■□□□□ 0.86
SF1-212ENST00000463343 ZNF697Q5TEC3 545 aa20.41■□□□□ 0.86
SF1-212ENST00000463343 WWC2Q6AWC2 1192 aa20.41■□□□□ 0.86
SF1-212ENST00000463343 HEATR3Q7Z4Q2 680 aa20.41■□□□□ 0.86
SF1-212ENST00000463343 PHKBQ93100 1093 aa20.41■□□□□ 0.86
SF1-212ENST00000463343 UPF2Q9HAU5 1272 aaKnown RBP20.41■□□□□ 0.86
SF1-212ENST00000463343 PDLIM7Q9NR12 457 aa20.41■□□□□ 0.86
SF1-212ENST00000463343 PPFIA3O75145 1194 aa20.4■□□□□ 0.86
SF1-212ENST00000463343 LCTP09848 1927 aa20.4■□□□□ 0.86
SF1-212ENST00000463343 RARBP10826 455 aa20.4■□□□□ 0.86
SF1-212ENST00000463343 EDNRBP24530 442 aa20.4■□□□□ 0.86
SF1-212ENST00000463343 SMAD3P84022 425 aaKnown RBP20.4■□□□□ 0.86
SF1-212ENST00000463343 PKN1Q16512 942 aa20.4■□□□□ 0.86
SF1-212ENST00000463343 ANO1Q5XXA6 986 aa20.4■□□□□ 0.86
SF1-212ENST00000463343 NOL8Q76FK4 1167 aaKnown RBP20.4■□□□□ 0.86
SF1-212ENST00000463343 RNF180Q86T96 592 aa20.4■□□□□ 0.86
SF1-212ENST00000463343 RMDN3Q96TC7 470 aa20.4■□□□□ 0.86
SF1-212ENST00000463343 ZHX1Q9UKY1 873 aaPredicted RBP20.4■□□□□ 0.86
SF1-212ENST00000463343 SCRN1Q12765 414 aa20.39■□□□□ 0.85
SF1-212ENST00000463343 PFKFB3Q16875 520 aaPredicted RBP20.39■□□□□ 0.85
SF1-212ENST00000463343 TYW1BQ6NUM6 668 aa20.39■□□□□ 0.85
SF1-212ENST00000463343 EEPD1Q7L9B9 569 aa20.39■□□□□ 0.85
SF1-212ENST00000463343 NSUN6Q8TEA1 469 aaKnown RBP20.39■□□□□ 0.85
SF1-212ENST00000463343 BADQ92934 168 aa20.39■□□□□ 0.85
SF1-212ENST00000463343 TSEN34Q9BSV6 310 aaKnown RBP20.39■□□□□ 0.85
SF1-212ENST00000463343 SLKQ9H2G2 1235 aaPredicted RBP20.39■□□□□ 0.85
SF1-212ENST00000463343 XPNPEP3Q9NQH7 507 aa20.39■□□□□ 0.85
SF1-212ENST00000463343 FAM184BQ9ULE4 1060 aa20.39■□□□□ 0.85
SF1-212ENST00000463343 MCM3APO60318 1980 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 TRIM43BA6NCK2 446 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 STXBP3O00186 592 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 MEIS2O14770 477 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 LARGE1O95461 756 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 TLE2Q04725 743 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 ME3Q16798 604 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 CCDC144BQ3MJ40 725 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 TAPT1Q6NXT6 567 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 USP17L6PQ6QN14 398 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 FCHSD1Q86WN1 690 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.38■□□□□ 0.85
SF1-212ENST00000463343 TRIM43Q96BQ3 446 aaPredicted RBP20.38■□□□□ 0.85
SF1-212ENST00000463343 TBC1D32Q96NH3 1257 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 SLC26A6Q9BXS9 759 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 RNF26Q9BY78 433 aaPredicted RBP20.38■□□□□ 0.85
SF1-212ENST00000463343 SEMA6BQ9H3T3 888 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 PSTPIP2Q9H939 334 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 PDGFCQ9NRA1 345 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 BARHL2Q9NY43 387 aa20.38■□□□□ 0.85
SF1-212ENST00000463343 PIK3CDO00329 1044 aa20.37■□□□□ 0.85
SF1-212ENST00000463343 CPLX1O14810 134 aa20.37■□□□□ 0.85
SF1-212ENST00000463343 KIAA0355O15063 1070 aa20.37■□□□□ 0.85
SF1-212ENST00000463343 SCG2P13521 617 aa20.37■□□□□ 0.85
SF1-212ENST00000463343 AKR1A1P14550 325 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms