RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 PCDHA1Q9Y5I3 950 aa21.98■■□□□ 1.11
COL5A1-203ENST00000460264 LAMA2P24043 3122 aaKnown RBP21.97■■□□□ 1.11
COL5A1-203ENST00000460264 CDC45O75419 566 aa21.97■■□□□ 1.11
COL5A1-203ENST00000460264 DDAH1O94760 285 aa21.97■■□□□ 1.11
COL5A1-203ENST00000460264 CFBP00751 764 aa21.97■■□□□ 1.11
COL5A1-203ENST00000460264 HSD17B4P51659 736 aa21.97■■□□□ 1.11
COL5A1-203ENST00000460264 FAM126BQ8IXS8 530 aa21.97■■□□□ 1.11
COL5A1-203ENST00000460264 ZNF654Q8IZM8 581 aa21.97■■□□□ 1.11
COL5A1-203ENST00000460264 SLC43A3Q8NBI5 491 aa21.97■■□□□ 1.11
COL5A1-203ENST00000460264 MAP3K14Q99558 947 aa21.97■■□□□ 1.11
COL5A1-203ENST00000460264 SCN10AQ9Y5Y9 1956 aa21.96■■□□□ 1.11
COL5A1-203ENST00000460264 SH2B2O14492 632 aaPredicted RBP21.96■■□□□ 1.11
COL5A1-203ENST00000460264 NKRFO15226 690 aaKnown RBP eCLIP21.96■■□□□ 1.11
COL5A1-203ENST00000460264 GPR153Q6NV75 609 aa21.96■■□□□ 1.11
COL5A1-203ENST00000460264 OR6J1Q8NGC5 347 aa21.96■■□□□ 1.11
COL5A1-203ENST00000460264 TMEM87BQ96K49 555 aa21.96■■□□□ 1.11
COL5A1-203ENST00000460264 IWS1Q96ST2 819 aa21.96■■□□□ 1.11
COL5A1-203ENST00000460264 MYL10Q9BUA6 226 aa21.96■■□□□ 1.11
COL5A1-203ENST00000460264 GRIN2DO15399 1336 aa21.96■■□□□ 1.11
COL5A1-203ENST00000460264 PNMA6FA0A0J9YX94 578 aa21.95■■□□□ 1.1
COL5A1-203ENST00000460264 EIF2AK2P19525 551 aaKnown RBP21.95■■□□□ 1.1
COL5A1-203ENST00000460264 CPT1AP50416 773 aa21.95■■□□□ 1.1
COL5A1-203ENST00000460264 TRAF1Q13077 416 aa21.95■■□□□ 1.1
COL5A1-203ENST00000460264 ITGA7Q13683 1181 aa21.95■■□□□ 1.1
COL5A1-203ENST00000460264 SHHQ15465 462 aa21.95■■□□□ 1.1
COL5A1-203ENST00000460264 C9orf50Q5SZB4 431 aa21.95■■□□□ 1.1
COL5A1-203ENST00000460264 ARHGEF16Q5VV41 709 aa21.95■■□□□ 1.1
COL5A1-203ENST00000460264 PXMP2Q9NR77 195 aa21.95■■□□□ 1.1
COL5A1-203ENST00000460264 TLR3O15455 904 aaKnown RBP21.94■■□□□ 1.1
COL5A1-203ENST00000460264 ARIH2O95376 493 aa21.94■■□□□ 1.1
COL5A1-203ENST00000460264 TIMP1P01033 207 aa21.94■■□□□ 1.1
COL5A1-203ENST00000460264 CD4P01730 458 aa21.94■■□□□ 1.1
COL5A1-203ENST00000460264 TXNP10599 105 aaKnown RBP21.94■■□□□ 1.1
COL5A1-203ENST00000460264 KIF5BP33176 963 aa21.94■■□□□ 1.1
COL5A1-203ENST00000460264 PSMC6P62333 389 aa21.94■■□□□ 1.1
COL5A1-203ENST00000460264 TTLL4Q14679 1199 aa21.94■■□□□ 1.1
COL5A1-203ENST00000460264 CTCFLQ8NI51 663 aaPredicted RBP21.94■■□□□ 1.1
COL5A1-203ENST00000460264 COPS5Q92905 334 aa21.94■■□□□ 1.1
COL5A1-203ENST00000460264 SPZ1Q9BXG8 430 aa21.94■■□□□ 1.1
COL5A1-203ENST00000460264 POLR3EQ9NVU0 708 aa21.94■■□□□ 1.1
COL5A1-203ENST00000460264 MAP3K20Q9NYL2 800 aaKnown RBP21.94■■□□□ 1.1
COL5A1-203ENST00000460264 HOXA13P31271 388 aaPredicted RBP21.93■■□□□ 1.1
COL5A1-203ENST00000460264 LIFRP42702 1097 aa21.93■■□□□ 1.1
COL5A1-203ENST00000460264 EPHB4P54760 987 aa21.93■■□□□ 1.1
COL5A1-203ENST00000460264 PURAQ00577 322 aaKnown RBP21.93■■□□□ 1.1
COL5A1-203ENST00000460264 FPGSQ05932 587 aa21.93■■□□□ 1.1
COL5A1-203ENST00000460264 STXBP2Q15833 593 aa21.93■■□□□ 1.1
COL5A1-203ENST00000460264 RNF20Q5VTR2 975 aa21.93■■□□□ 1.1
COL5A1-203ENST00000460264 CCDC62Q6P9F0 684 aa21.93■■□□□ 1.1
COL5A1-203ENST00000460264 NFXL1Q6ZNB6 911 aa21.93■■□□□ 1.1
COL5A1-203ENST00000460264 TMTC2Q8N394 836 aa21.93■■□□□ 1.1
COL5A1-203ENST00000460264 SAMD3Q8N6K7 520 aa21.93■■□□□ 1.1
COL5A1-203ENST00000460264 SEZ6LQ9BYH1 1024 aa21.93■■□□□ 1.1
COL5A1-203ENST00000460264 CCDC69A6NI79 296 aa21.92■■□□□ 1.1
COL5A1-203ENST00000460264 SEPT14Q6ZU15 432 aa21.92■■□□□ 1.1
COL5A1-203ENST00000460264 LRRC2Q9BYS8 371 aa21.92■■□□□ 1.1
COL5A1-203ENST00000460264 MYH7BA7E2Y1 1941 aa21.92■■□□□ 1.1
COL5A1-203ENST00000460264 A6NJR5 290 aa21.91■■□□□ 1.1
COL5A1-203ENST00000460264 NR3C2P08235 984 aa21.91■■□□□ 1.1
COL5A1-203ENST00000460264 MYL3P08590 195 aa21.91■■□□□ 1.1
COL5A1-203ENST00000460264 BRDTQ58F21 947 aaPredicted RBP21.91■■□□□ 1.1
COL5A1-203ENST00000460264 PIBF1Q8WXW3 757 aa21.91■■□□□ 1.1
COL5A1-203ENST00000460264 GCOM1H8Y6P7 765 aaPredicted RBP21.9■■□□□ 1.1
COL5A1-203ENST00000460264 EIF3JO75822 258 aaKnown RBP21.9■■□□□ 1.1
COL5A1-203ENST00000460264 PLEKHA8P1O95397 391 aa21.9■■□□□ 1.1
COL5A1-203ENST00000460264 POLR2MP0CAP2 368 aa21.9■■□□□ 1.1
COL5A1-203ENST00000460264 RXRAP19793 462 aa21.9■■□□□ 1.1
COL5A1-203ENST00000460264 SMARCA1P28370 1054 aa21.9■■□□□ 1.1
COL5A1-203ENST00000460264 MFSD5Q6N075 450 aa21.9■■□□□ 1.1
COL5A1-203ENST00000460264 LZTS2Q9BRK4 669 aa21.9■■□□□ 1.1
COL5A1-203ENST00000460264 PDCD2LQ9BRP1 358 aa21.9■■□□□ 1.1
COL5A1-203ENST00000460264 MTG1Q9BT17 334 aaPredicted RBP21.9■■□□□ 1.1
COL5A1-203ENST00000460264 TRPV6Q9H1D0 765 aa21.9■■□□□ 1.1
COL5A1-203ENST00000460264 B4GALT4O60513 344 aa21.89■■□□□ 1.09
COL5A1-203ENST00000460264 GH1P01241 217 aa21.89■■□□□ 1.09
COL5A1-203ENST00000460264 CALM1P0DP23 149 aa21.89■■□□□ 1.09
COL5A1-203ENST00000460264 CALM2P0DP24 149 aa21.89■■□□□ 1.09
COL5A1-203ENST00000460264 CALM3P0DP25 149 aa21.89■■□□□ 1.09
COL5A1-203ENST00000460264 GNAQP50148 359 aa21.89■■□□□ 1.09
COL5A1-203ENST00000460264 ARHGAP1Q07960 439 aa21.89■■□□□ 1.09
COL5A1-203ENST00000460264 LY6KQ17RY6 165 aa21.89■■□□□ 1.09
COL5A1-203ENST00000460264 TSGA10IPQ3SY00 556 aa21.89■■□□□ 1.09
COL5A1-203ENST00000460264 Q7L0L9 218 aa21.89■■□□□ 1.09
COL5A1-203ENST00000460264 SGMS1Q86VZ5 419 aa21.89■■□□□ 1.09
COL5A1-203ENST00000460264 SRBD1Q8N5C6 995 aaKnown RBP21.89■■□□□ 1.09
COL5A1-203ENST00000460264 DEFB123Q8N688 67 aa21.89■■□□□ 1.09
COL5A1-203ENST00000460264 IL31RAQ8NI17 732 aa21.89■■□□□ 1.09
COL5A1-203ENST00000460264 RRP36Q96EU6 259 aaKnown RBP21.89■■□□□ 1.09
COL5A1-203ENST00000460264 PPP1R12CQ9BZL4 782 aa21.89■■□□□ 1.09
COL5A1-203ENST00000460264 ALDH8A1Q9H2A2 487 aaPredicted RBP21.89■■□□□ 1.09
COL5A1-203ENST00000460264 SLC12A7Q9Y666 1083 aa21.89■■□□□ 1.09
COL5A1-203ENST00000460264 KPNA6O60684 536 aa21.88■■□□□ 1.09
COL5A1-203ENST00000460264 PGM5Q15124 567 aa21.88■■□□□ 1.09
COL5A1-203ENST00000460264 FCHSD1Q86WN1 690 aa21.88■■□□□ 1.09
COL5A1-203ENST00000460264 RAB11FIP4Q86YS3 637 aa21.88■■□□□ 1.09
COL5A1-203ENST00000460264 RASEFQ8IZ41 740 aa21.88■■□□□ 1.09
COL5A1-203ENST00000460264 AFG1LQ8WV93 481 aa21.88■■□□□ 1.09
COL5A1-203ENST00000460264 NEK1Q96PY6 1258 aa21.88■■□□□ 1.09
COL5A1-203ENST00000460264 SEC63Q9UGP8 760 aaKnown RBP21.88■■□□□ 1.09
COL5A1-203ENST00000460264 RGS20O76081 388 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms