RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 FAM217BQ9NTX9 383 aaPredicted RBP11.66□□□□□ -0.54
RFX3-210ENST00000457373 ADD3Q9UEY8 706 aaKnown RBP11.66□□□□□ -0.54
RFX3-210ENST00000457373 DDX20Q9UHI6 824 aaKnown RBP11.66□□□□□ -0.54
RFX3-210ENST00000457373 ZHX1Q9UKY1 873 aaPredicted RBP11.66□□□□□ -0.54
RFX3-210ENST00000457373 CNPY2Q9Y2B0 182 aa11.66□□□□□ -0.54
RFX3-210ENST00000457373 DDX49Q9Y6V7 483 aaKnown RBP11.66□□□□□ -0.54
RFX3-210ENST00000457373 FRMPD3Q5JV73 1810 aa11.65□□□□□ -0.54
RFX3-210ENST00000457373 SYNGAP1Q96PV0 1343 aa11.65□□□□□ -0.54
RFX3-210ENST00000457373 PDIA3P30101 505 aaKnown RBP11.65□□□□□ -0.54
RFX3-210ENST00000457373 RGS19P49795 217 aa11.65□□□□□ -0.54
RFX3-210ENST00000457373 ALDH5A1P51649 535 aaPredicted RBP11.65□□□□□ -0.54
RFX3-210ENST00000457373 STK3Q13188 491 aa11.65□□□□□ -0.54
RFX3-210ENST00000457373 ACVR2BQ13705 512 aa11.65□□□□□ -0.54
RFX3-210ENST00000457373 EEPD1Q7L9B9 569 aa11.65□□□□□ -0.54
RFX3-210ENST00000457373 V9GY48 417 aaPredicted RBP11.65□□□□□ -0.54
RFX3-210ENST00000457373 ASTN1O14525 1302 aa11.64□□□□□ -0.55
RFX3-210ENST00000457373 CNTNAP5Q8WYK1 1306 aa11.64□□□□□ -0.55
RFX3-210ENST00000457373 CCDC196A0A1B0GTZ2 297 aa11.64□□□□□ -0.55
RFX3-210ENST00000457373 OPLAHO14841 1288 aa11.64□□□□□ -0.55
RFX3-210ENST00000457373 SEPT4O43236 478 aa11.64□□□□□ -0.55
RFX3-210ENST00000457373 ZNF865P0CJ78 1059 aaPredicted RBP11.64□□□□□ -0.55
RFX3-210ENST00000457373 RCAN1P53805 252 aa11.64□□□□□ -0.55
RFX3-210ENST00000457373 FOXK1P85037 733 aa11.64□□□□□ -0.55
RFX3-210ENST00000457373 MLLT1Q03111 559 aaPredicted RBP11.64□□□□□ -0.55
RFX3-210ENST00000457373 PPP2R5BQ15173 497 aa11.64□□□□□ -0.55
RFX3-210ENST00000457373 LHX8Q68G74 356 aa11.64□□□□□ -0.55
RFX3-210ENST00000457373 NOL8Q76FK4 1167 aaKnown RBP11.64□□□□□ -0.55
RFX3-210ENST00000457373 SYTL5Q8TDW5 730 aaPredicted RBP11.64□□□□□ -0.55
RFX3-210ENST00000457373 GPKOWQ92917 476 aaPredicted RBP eCLIP11.64□□□□□ -0.55
RFX3-210ENST00000457373 C22orf23Q9BZE7 217 aa11.64□□□□□ -0.55
RFX3-210ENST00000457373 ABHD16BQ9H3Z7 469 aa11.64□□□□□ -0.55
RFX3-210ENST00000457373 NRBP1Q9UHY1 535 aa11.64□□□□□ -0.55
RFX3-210ENST00000457373 FAM184BQ9ULE4 1060 aa11.64□□□□□ -0.55
RFX3-210ENST00000457373 KIAA0100Q14667 2235 aaKnown RBP11.64□□□□□ -0.55
RFX3-210ENST00000457373 GCOM1H8Y6P7 765 aaPredicted RBP11.63□□□□□ -0.55
RFX3-210ENST00000457373 MSCO60682 206 aa11.63□□□□□ -0.55
RFX3-210ENST00000457373 PPFIA3O75145 1194 aa11.63□□□□□ -0.55
RFX3-210ENST00000457373 POLR2MP0CAP2 368 aa11.63□□□□□ -0.55
RFX3-210ENST00000457373 AKR1A1P14550 325 aa11.63□□□□□ -0.55
RFX3-210ENST00000457373 HOXA13P31271 388 aaPredicted RBP11.63□□□□□ -0.55
RFX3-210ENST00000457373 NEK4P51957 841 aa11.63□□□□□ -0.55
RFX3-210ENST00000457373 AK2P54819 239 aa11.63□□□□□ -0.55
RFX3-210ENST00000457373 EVCP57679 992 aa11.63□□□□□ -0.55
RFX3-210ENST00000457373 FUT2Q10981 343 aa11.63□□□□□ -0.55
RFX3-210ENST00000457373 ARHGEF16Q5VV41 709 aa11.63□□□□□ -0.55
RFX3-210ENST00000457373 HEATR3Q7Z4Q2 680 aa11.63□□□□□ -0.55
RFX3-210ENST00000457373 FCHSD1Q86WN1 690 aa11.63□□□□□ -0.55
RFX3-210ENST00000457373 DNERQ8NFT8 737 aa11.63□□□□□ -0.55
RFX3-210ENST00000457373 ZNF274Q96GC6 653 aaPredicted RBP11.63□□□□□ -0.55
RFX3-210ENST00000457373 MPHOSPH6Q99547 160 aaKnown RBP11.63□□□□□ -0.55
RFX3-210ENST00000457373 FAM117AQ9C073 453 aa11.63□□□□□ -0.55
RFX3-210ENST00000457373 NCOA5Q9HCD5 579 aaKnown RBP11.63□□□□□ -0.55
RFX3-210ENST00000457373 COL20A1Q9P218 1284 aa11.63□□□□□ -0.55
RFX3-210ENST00000457373 OGDHLQ9ULD0 1010 aa11.63□□□□□ -0.55
RFX3-210ENST00000457373 B4DLN1 442 aa11.62□□□□□ -0.55
RFX3-210ENST00000457373 FARP2O94887 1054 aaPredicted RBP11.62□□□□□ -0.55
RFX3-210ENST00000457373 RARBP10826 455 aa11.62□□□□□ -0.55
RFX3-210ENST00000457373 CAPN2P17655 700 aa11.62□□□□□ -0.55
RFX3-210ENST00000457373 EIF2AK2P19525 551 aaKnown RBP11.62□□□□□ -0.55
RFX3-210ENST00000457373 HSD17B4P51659 736 aa11.62□□□□□ -0.55
RFX3-210ENST00000457373 MRPL12P52815 198 aaKnown RBP11.62□□□□□ -0.55
RFX3-210ENST00000457373 AKAP17AQ02040 695 aaKnown RBP11.62□□□□□ -0.55
RFX3-210ENST00000457373 CCDC144BQ3MJ40 725 aa11.62□□□□□ -0.55
RFX3-210ENST00000457373 FBXO16Q8IX29 292 aaPredicted RBP11.62□□□□□ -0.55
RFX3-210ENST00000457373 SAMD3Q8N6K7 520 aa11.62□□□□□ -0.55
RFX3-210ENST00000457373 SMARCC2Q8TAQ2 1214 aa11.62□□□□□ -0.55
RFX3-210ENST00000457373 MORC4Q8TE76 937 aa11.62□□□□□ -0.55
RFX3-210ENST00000457373 DIS3LQ8TF46 1054 aaKnown RBP11.62□□□□□ -0.55
RFX3-210ENST00000457373 CUL5Q93034 780 aa11.62□□□□□ -0.55
RFX3-210ENST00000457373 PHKBQ93100 1093 aa11.62□□□□□ -0.55
RFX3-210ENST00000457373 LENG1Q96BZ8 264 aaPredicted RBP11.62□□□□□ -0.55
RFX3-210ENST00000457373 IL17RAQ96F46 866 aa11.62□□□□□ -0.55
RFX3-210ENST00000457373 PAWRQ96IZ0 340 aaKnown RBP11.62□□□□□ -0.55
RFX3-210ENST00000457373 RMDN3Q96TC7 470 aa11.62□□□□□ -0.55
RFX3-210ENST00000457373 MAF1Q9H063 256 aa11.62□□□□□ -0.55
RFX3-210ENST00000457373 KATNBL1Q9H079 304 aa11.62□□□□□ -0.55
RFX3-210ENST00000457373 ALDH8A1Q9H2A2 487 aaPredicted RBP11.62□□□□□ -0.55
RFX3-210ENST00000457373 UPF2Q9HAU5 1272 aaKnown RBP11.62□□□□□ -0.55
RFX3-210ENST00000457373 PDGFCQ9NRA1 345 aa11.62□□□□□ -0.55
RFX3-210ENST00000457373 MAP3K20Q9NYL2 800 aaKnown RBP11.62□□□□□ -0.55
RFX3-210ENST00000457373 LRRC37A2A6NM11 1700 aa11.61□□□□□ -0.55
RFX3-210ENST00000457373 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.61□□□□□ -0.55
RFX3-210ENST00000457373 CPLX1O14810 134 aa11.61□□□□□ -0.55
RFX3-210ENST00000457373 PRPF3O43395 683 aaKnown RBP11.61□□□□□ -0.55
RFX3-210ENST00000457373 MYCLP12524 364 aaPredicted RBP11.61□□□□□ -0.55
RFX3-210ENST00000457373 ADCYAP1R1P41586 468 aa11.61□□□□□ -0.55
RFX3-210ENST00000457373 NAPAP54920 295 aa11.61□□□□□ -0.55
RFX3-210ENST00000457373 GHRHRQ02643 423 aa11.61□□□□□ -0.55
RFX3-210ENST00000457373 ANKRD1Q15327 319 aa11.61□□□□□ -0.55
RFX3-210ENST00000457373 NTRK3Q16288 839 aa11.61□□□□□ -0.55
RFX3-210ENST00000457373 GJC2Q5T442 439 aaPredicted RBP11.61□□□□□ -0.55
RFX3-210ENST00000457373 WWC2Q6AWC2 1192 aa11.61□□□□□ -0.55
RFX3-210ENST00000457373 USP17L6PQ6QN14 398 aa11.61□□□□□ -0.55
RFX3-210ENST00000457373 ANKLE1Q8NAG6 615 aa11.61□□□□□ -0.55
RFX3-210ENST00000457373 NSUN6Q8TEA1 469 aaKnown RBP11.61□□□□□ -0.55
RFX3-210ENST00000457373 SLC26A6Q9BXS9 759 aa11.61□□□□□ -0.55
RFX3-210ENST00000457373 SLKQ9H2G2 1235 aaPredicted RBP11.61□□□□□ -0.55
RFX3-210ENST00000457373 PSTPIP2Q9H939 334 aa11.61□□□□□ -0.55
RFX3-210ENST00000457373 XPNPEP3Q9NQH7 507 aa11.61□□□□□ -0.55
RFX3-210ENST00000457373 PXMP2Q9NR77 195 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms