RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 CRKP46108 304 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 SF3B2Q13435 895 aaKnown RBP15.1■□□□□ 0.01
TOP3B-213ENST00000457179 ZYXQ15942 572 aaKnown RBP15.1■□□□□ 0.01
TOP3B-213ENST00000457179 PFKFB3Q16875 520 aaPredicted RBP15.1■□□□□ 0.01
TOP3B-213ENST00000457179 BLIDQ8IZY5 108 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 MLKLQ8NB16 471 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 GJA10Q969M2 543 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 ZNF277Q9NRM2 450 aaPredicted RBP15.1■□□□□ 0.01
TOP3B-213ENST00000457179 STK32BQ9NY57 414 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 CTNND2Q9UQB3 1225 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 TCP10L2B9ZVM9 353 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 NDUFAB1O14561 156 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 AARSP49588 968 aaKnown RBP eCLIP15.1■□□□□ 0.01
TOP3B-213ENST00000457179 PPARDQ03181 441 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 ACTN3Q08043 901 aaPredicted RBP15.1■□□□□ 0.01
TOP3B-213ENST00000457179 SLC15A2Q16348 729 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 MAP9Q49MG5 647 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 COG1Q8WTW3 980 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 VEZTQ9HBM0 779 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 GUCA1BQ9UMX6 200 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 RGL2O15211 777 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 ELF1P32519 619 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 TRIM10Q9UDY6 481 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 GOLGA6BA6NDN3 693 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 SMCO2A6NFE2 343 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 FGRP09769 529 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 MYBL2P10244 700 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 PAX7P23759 505 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 CASP14P31944 242 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 NEDD9Q14511 834 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 RNF187Q5TA31 235 aaPredicted RBP15.09■□□□□ 0.01
TOP3B-213ENST00000457179 SOGA3Q5TF21 947 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 CEP57Q86XR8 500 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 PRPF38AQ8NAV1 312 aaKnown RBP15.09■□□□□ 0.01
TOP3B-213ENST00000457179 NUP88Q99567 741 aaPredicted RBP15.09■□□□□ 0.01
TOP3B-213ENST00000457179 TMEM260Q9NX78 707 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 ZEB2O60315 1214 aa15.08■□□□□ 0.01
TOP3B-213ENST00000457179 CCNT1O60563 726 aaKnown RBP15.08■□□□□ 0.01
TOP3B-213ENST00000457179 PCP11498 1178 aaKnown RBP15.08■□□□□ 0.01
TOP3B-213ENST00000457179 DPYDQ12882 1025 aa15.08■□□□□ 0.01
TOP3B-213ENST00000457179 NPY5RQ15761 445 aa15.08■□□□□ 0.01
TOP3B-213ENST00000457179 KIRREL3Q8IZU9 778 aa15.08■□□□□ 0.01
TOP3B-213ENST00000457179 SLF1Q9BQI6 1058 aa15.08■□□□□ 0.01
TOP3B-213ENST00000457179 DACH1Q9UI36 760 aa15.08■□□□□ 0.01
TOP3B-213ENST00000457179 DDTLA6NHG4 134 aaPredicted RBP15.08■□□□□ 0
TOP3B-213ENST00000457179 SSBP05455 408 aaKnown RBP eCLIP15.08■□□□□ 0
TOP3B-213ENST00000457179 SARSP49591 514 aaKnown RBP15.08■□□□□ 0
TOP3B-213ENST00000457179 RRAGBQ5VZM2 374 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 APOBEC3HQ6NTF7 200 aaKnown RBP15.08■□□□□ 0
TOP3B-213ENST00000457179 WDR93Q6P2C0 686 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 ZKSCAN4Q969J2 545 aaPredicted RBP15.08■□□□□ 0
TOP3B-213ENST00000457179 SELENOOQ9BVL4 669 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 VIPAS39Q9H9C1 493 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.08■□□□□ 0
TOP3B-213ENST00000457179 SYNRGQ9UMZ2 1314 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 THSD7AQ9UPZ6 1657 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 EIF3HO15372 352 aaKnown RBP eCLIP15.08■□□□□ 02e-6■■□□□ 11.9
TOP3B-213ENST00000457179 ERCC3P19447 782 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 MRPS25P82663 173 aaKnown RBP15.08■□□□□ 0
TOP3B-213ENST00000457179 PDCLQ13371 301 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 CUL4BQ13620 913 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 PPP2R5BQ15173 497 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 C16orf86Q6ZW13 317 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 CAGE1Q8TC20 777 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 ENOX1Q8TC92 643 aaKnown RBP15.08■□□□□ 0
TOP3B-213ENST00000457179 VPS16Q9H269 839 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 SHOX2O60902 331 aaPredicted RBP15.07■□□□□ 0
TOP3B-213ENST00000457179 HLA-DOAP06340 250 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 ATP1A2P50993 1020 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 USP14P54578 494 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 PPFIA1Q13136 1202 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 MMS19Q96T76 1030 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 AGPSO00116 658 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 TULP1O00294 542 aaPredicted RBP15.07■□□□□ 0
TOP3B-213ENST00000457179 MARCH6O60337 910 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 TNNI2P48788 182 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 MIGA2Q7L4E1 593 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 LARGE2Q8N3Y3 721 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 MIEF2Q96C03 454 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 PANX2Q96RD6 677 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 TMEM60Q9H2L4 133 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 ODF2LQ9ULJ1 636 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 TFR2Q9UP52 801 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 NHSQ6T4R5 1651 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 PDS5AQ29RF7 1337 aaKnown RBP15.07■□□□□ 0
TOP3B-213ENST00000457179 TUBBP07437 444 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 ZNF18P17022 549 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 TUBB4BP68371 445 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 UBE2SQ16763 222 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 NAIF1Q69YI7 327 aaPredicted RBP15.06■□□□□ 0
TOP3B-213ENST00000457179 KANK3Q6NY19 840 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 CCDC84Q86UT8 332 aaPredicted RBP15.06■□□□□ 0
TOP3B-213ENST00000457179 ZNF579Q8NAF0 562 aaKnown RBP15.06■□□□□ 0
TOP3B-213ENST00000457179 RRP36Q96EU6 259 aaKnown RBP15.06■□□□□ 0
TOP3B-213ENST00000457179 ZC3H4Q9UPT8 1303 aaKnown RBP15.06■□□□□ 0
TOP3B-213ENST00000457179 BCORQ6W2J9 1755 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 CHD4Q14839 1912 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 IL17AQ16552 155 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 EGFL6Q8IUX8 553 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 NEDD1Q8NHV4 660 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms