RNA–Protein interactions for RNA: ENST00000453560.6

RAP1B-208, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 530 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-208ENST00000453560 HOMER1Q86YM7 354 aa22.51■■□□□ 1.19
RAP1B-208ENST00000453560 VTI1AQ96AJ9 217 aa22.51■■□□□ 1.19
RAP1B-208ENST00000453560 TMEM87BQ96K49 555 aa22.51■■□□□ 1.19
RAP1B-208ENST00000453560 RMDN3Q96TC7 470 aa22.51■■□□□ 1.19
RAP1B-208ENST00000453560 TMEM39AQ9NV64 488 aa22.51■■□□□ 1.19
RAP1B-208ENST00000453560 COL6A3P12111 3177 aa22.51■■□□□ 1.19
RAP1B-208ENST00000453560 ZEB2O60315 1214 aa22.5■■□□□ 1.19
RAP1B-208ENST00000453560 CFBP00751 764 aa22.5■■□□□ 1.19
RAP1B-208ENST00000453560 PPP2R5BQ15173 497 aa22.5■■□□□ 1.19
RAP1B-208ENST00000453560 FAM126BQ8IXS8 530 aa22.5■■□□□ 1.19
RAP1B-208ENST00000453560 SLC43A3Q8NBI5 491 aa22.5■■□□□ 1.19
RAP1B-208ENST00000453560 IWS1Q96ST2 819 aa22.5■■□□□ 1.19
RAP1B-208ENST00000453560 MAP3K20Q9NYL2 800 aaKnown RBP22.5■■□□□ 1.19
RAP1B-208ENST00000453560 TBX21Q9UL17 535 aa22.5■■□□□ 1.19
RAP1B-208ENST00000453560 PNMA6FA0A0J9YX94 578 aa22.49■■□□□ 1.19
RAP1B-208ENST00000453560 NKRFO15226 690 aaKnown RBP eCLIP22.49■■□□□ 1.19
RAP1B-208ENST00000453560 RAG1P15918 1043 aa22.49■■□□□ 1.19
RAP1B-208ENST00000453560 LIFRP42702 1097 aa22.49■■□□□ 1.19
RAP1B-208ENST00000453560 TRAF1Q13077 416 aa22.49■■□□□ 1.19
RAP1B-208ENST00000453560 GPR153Q6NV75 609 aa22.49■■□□□ 1.19
RAP1B-208ENST00000453560 TMTC2Q8N394 836 aa22.49■■□□□ 1.19
RAP1B-208ENST00000453560 MYL10Q9BUA6 226 aa22.49■■□□□ 1.19
RAP1B-208ENST00000453560 GRIN2DO15399 1336 aa22.49■■□□□ 1.19
RAP1B-208ENST00000453560 SCN10AQ9Y5Y9 1956 aa22.49■■□□□ 1.19
RAP1B-208ENST00000453560 ARIH2O95376 493 aa22.48■■□□□ 1.19
RAP1B-208ENST00000453560 CPT1AP50416 773 aa22.48■■□□□ 1.19
RAP1B-208ENST00000453560 ITGA7Q13683 1181 aa22.48■■□□□ 1.19
RAP1B-208ENST00000453560 RNF20Q5VTR2 975 aa22.48■■□□□ 1.19
RAP1B-208ENST00000453560 SAMD3Q8N6K7 520 aa22.48■■□□□ 1.19
RAP1B-208ENST00000453560 OR6J1Q8NGC5 347 aa22.48■■□□□ 1.19
RAP1B-208ENST00000453560 CTCFLQ8NI51 663 aaPredicted RBP22.48■■□□□ 1.19
RAP1B-208ENST00000453560 SPZ1Q9BXG8 430 aa22.48■■□□□ 1.19
RAP1B-208ENST00000453560 PXMP2Q9NR77 195 aa22.48■■□□□ 1.19
RAP1B-208ENST00000453560 CD4P01730 458 aa22.47■■□□□ 1.19
RAP1B-208ENST00000453560 TXNP10599 105 aaKnown RBP22.47■■□□□ 1.19
RAP1B-208ENST00000453560 KIF5BP33176 963 aa22.47■■□□□ 1.19
RAP1B-208ENST00000453560 TTLL4Q14679 1199 aa22.47■■□□□ 1.19
RAP1B-208ENST00000453560 STXBP2Q15833 593 aa22.47■■□□□ 1.19
RAP1B-208ENST00000453560 ARHGEF16Q5VV41 709 aa22.47■■□□□ 1.19
RAP1B-208ENST00000453560 CCDC62Q6P9F0 684 aa22.47■■□□□ 1.19
RAP1B-208ENST00000453560 COPS5Q92905 334 aa22.47■■□□□ 1.19
RAP1B-208ENST00000453560 SEZ6LQ9BYH1 1024 aa22.47■■□□□ 1.19
RAP1B-208ENST00000453560 CCDC69A6NI79 296 aa22.46■■□□□ 1.19
RAP1B-208ENST00000453560 A6NJR5 290 aa22.46■■□□□ 1.19
RAP1B-208ENST00000453560 TIMP1P01033 207 aa22.46■■□□□ 1.19
RAP1B-208ENST00000453560 EIF2AK2P19525 551 aaKnown RBP22.46■■□□□ 1.19
RAP1B-208ENST00000453560 SMARCA1P28370 1054 aa22.46■■□□□ 1.19
RAP1B-208ENST00000453560 PURAQ00577 322 aaKnown RBP22.46■■□□□ 1.19
RAP1B-208ENST00000453560 SHHQ15465 462 aa22.46■■□□□ 1.19
RAP1B-208ENST00000453560 C9orf50Q5SZB4 431 aa22.46■■□□□ 1.19
RAP1B-208ENST00000453560 NFXL1Q6ZNB6 911 aa22.46■■□□□ 1.19
RAP1B-208ENST00000453560 POLR3EQ9NVU0 708 aa22.46■■□□□ 1.19
RAP1B-208ENST00000453560 TLR3O15455 904 aaKnown RBP22.45■■□□□ 1.18
RAP1B-208ENST00000453560 NR3C2P08235 984 aa22.45■■□□□ 1.18
RAP1B-208ENST00000453560 HOXA13P31271 388 aaPredicted RBP22.45■■□□□ 1.18
RAP1B-208ENST00000453560 PSMC6P62333 389 aa22.45■■□□□ 1.18
RAP1B-208ENST00000453560 TSGA10IPQ3SY00 556 aa22.45■■□□□ 1.18
RAP1B-208ENST00000453560 LRRC2Q9BYS8 371 aa22.45■■□□□ 1.18
RAP1B-208ENST00000453560 MYH7BA7E2Y1 1941 aa22.44■■□□□ 1.18
RAP1B-208ENST00000453560 EIF3JO75822 258 aaKnown RBP22.44■■□□□ 1.18
RAP1B-208ENST00000453560 CALM1P0DP23 149 aa22.44■■□□□ 1.18
RAP1B-208ENST00000453560 CALM2P0DP24 149 aa22.44■■□□□ 1.18
RAP1B-208ENST00000453560 CALM3P0DP25 149 aa22.44■■□□□ 1.18
RAP1B-208ENST00000453560 EPHB4P54760 987 aa22.44■■□□□ 1.18
RAP1B-208ENST00000453560 FPGSQ05932 587 aa22.44■■□□□ 1.18
RAP1B-208ENST00000453560 SEPT14Q6ZU15 432 aa22.44■■□□□ 1.18
RAP1B-208ENST00000453560 SGMS1Q86VZ5 419 aa22.44■■□□□ 1.18
RAP1B-208ENST00000453560 RASEFQ8IZ41 740 aa22.44■■□□□ 1.18
RAP1B-208ENST00000453560 NEK1Q96PY6 1258 aa22.44■■□□□ 1.18
RAP1B-208ENST00000453560 LZTS2Q9BRK4 669 aa22.44■■□□□ 1.18
RAP1B-208ENST00000453560 PDCD2LQ9BRP1 358 aa22.44■■□□□ 1.18
RAP1B-208ENST00000453560 GCOM1H8Y6P7 765 aaPredicted RBP22.43■■□□□ 1.18
RAP1B-208ENST00000453560 PLEKHA8P1O95397 391 aa22.43■■□□□ 1.18
RAP1B-208ENST00000453560 POLR2MP0CAP2 368 aa22.43■■□□□ 1.18
RAP1B-208ENST00000453560 RXRAP19793 462 aa22.43■■□□□ 1.18
RAP1B-208ENST00000453560 LY6KQ17RY6 165 aa22.43■■□□□ 1.18
RAP1B-208ENST00000453560 BRDTQ58F21 947 aaPredicted RBP22.43■■□□□ 1.18
RAP1B-208ENST00000453560 MFSD5Q6N075 450 aa22.43■■□□□ 1.18
RAP1B-208ENST00000453560 PIBF1Q8WXW3 757 aa22.43■■□□□ 1.18
RAP1B-208ENST00000453560 RRP36Q96EU6 259 aaKnown RBP22.43■■□□□ 1.18
RAP1B-208ENST00000453560 SLC12A7Q9Y666 1083 aa22.43■■□□□ 1.18
RAP1B-208ENST00000453560 B4GALT4O60513 344 aa22.42■■□□□ 1.18
RAP1B-208ENST00000453560 MYL3P08590 195 aa22.42■■□□□ 1.18
RAP1B-208ENST00000453560 GNAQP50148 359 aa22.42■■□□□ 1.18
RAP1B-208ENST00000453560 EXOSC10Q01780 885 aaKnown RBP22.42■■□□□ 1.18
RAP1B-208ENST00000453560 ARHGAP1Q07960 439 aa22.42■■□□□ 1.18
RAP1B-208ENST00000453560 PGM5Q15124 567 aa22.42■■□□□ 1.18
RAP1B-208ENST00000453560 ADCK5Q3MIX3 580 aa22.42■■□□□ 1.18
RAP1B-208ENST00000453560 SRBD1Q8N5C6 995 aaKnown RBP22.42■■□□□ 1.18
RAP1B-208ENST00000453560 MTG1Q9BT17 334 aaPredicted RBP22.42■■□□□ 1.18
RAP1B-208ENST00000453560 CDH23Q9H251 3354 aa22.41■■□□□ 1.18
RAP1B-208ENST00000453560 FRMPD4Q14CM0 1322 aa22.41■■□□□ 1.18
RAP1B-208ENST00000453560 KPNA6O60684 536 aa22.41■■□□□ 1.18
RAP1B-208ENST00000453560 RGS20O76081 388 aa22.41■■□□□ 1.18
RAP1B-208ENST00000453560 GH1P01241 217 aa22.41■■□□□ 1.18
RAP1B-208ENST00000453560 VSIG10LQ86VR7 867 aa22.41■■□□□ 1.18
RAP1B-208ENST00000453560 IL31RAQ8NI17 732 aa22.41■■□□□ 1.18
RAP1B-208ENST00000453560 TRPV6Q9H1D0 765 aa22.41■■□□□ 1.18
RAP1B-208ENST00000453560 ALDH8A1Q9H2A2 487 aaPredicted RBP22.41■■□□□ 1.18
RAP1B-208ENST00000453560 DDX41Q9UJV9 622 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms