RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 GRIN2DO15399 1336 aa16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 A0A1W2PPC1 479 aa16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 CCDC69A6NI79 296 aa16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 EPB41L2O43491 1005 aaKnown RBP16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 CFBP00751 764 aa16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 CENPBP07199 599 aaPredicted RBP16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 NR3C2P08235 984 aa16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 CALM1P0DP23 149 aa16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 CALM2P0DP24 149 aa16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 CALM3P0DP25 149 aa16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 RXRAP19793 462 aa16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 GNAQP50148 359 aa16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 FUT2Q10981 343 aa16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 TRAF1Q13077 416 aa16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 FSCN1Q16658 493 aaKnown RBP16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 NFXL1Q6ZNB6 911 aa16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 NOL8Q76FK4 1167 aaKnown RBP16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 PDLIM7Q9NR12 457 aa16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 FAM217BQ9NTX9 383 aaPredicted RBP16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 SLC12A7Q9Y666 1083 aa16.31■□□□□ 0.2
RTFDC1-204ENST00000449062 B4DLN1 442 aa16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 RGS20O76081 388 aa16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 ARIH2O95376 493 aa16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 CPA1P15085 419 aa16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 ITGB8P26012 769 aa16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 HOXA13P31271 388 aaPredicted RBP16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 MRPL12P52815 198 aaKnown RBP16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 APOA5Q6Q788 366 aa16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 CXCL17Q6UXB2 119 aa16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 TMTC3Q6ZXV5 915 aa16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 VSIG10LQ86VR7 867 aa16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 CMTR1Q8N1G2 835 aaKnown RBP16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 FBXL16Q8N461 479 aa16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 SCFD2Q8WU76 684 aa16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 USP26Q9BXU7 913 aa16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 AP5M1Q9H0R1 490 aa16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 STARD7Q9NQZ5 370 aa16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 PXMP2Q9NR77 195 aa16.3■□□□□ 0.2
RTFDC1-204ENST00000449062 A6NJR5 290 aa16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 ARVCFO00192 962 aa16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 KIAA0355O15063 1070 aa16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 EIF3JO75822 258 aaKnown RBP16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 REC8O95072 547 aa16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 SLC34A2O95436 690 aa16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 HMGB1P09429 215 aaKnown RBP16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 FAAP100Q0VG06 881 aa16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 STXBP2Q15833 593 aa16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 RAB11FIP4Q86YS3 637 aa16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 PIBF1Q8WXW3 757 aa16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 COPS5Q92905 334 aa16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 RRP36Q96EU6 259 aaKnown RBP16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 GLT1D1Q96MS3 346 aa16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 PDCD2LQ9BRP1 358 aa16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 AGXT2Q9BYV1 514 aa16.29■□□□□ 0.2
RTFDC1-204ENST00000449062 LRRC37A2A6NM11 1700 aa16.28■□□□□ 0.2
RTFDC1-204ENST00000449062 GCOM1H8Y6P7 765 aaPredicted RBP16.28■□□□□ 0.2
RTFDC1-204ENST00000449062 NKRFO15226 690 aaKnown RBP eCLIP16.28■□□□□ 0.2
RTFDC1-204ENST00000449062 CABYRO75952 493 aa16.28■□□□□ 0.2
RTFDC1-204ENST00000449062 POLR2MP0CAP2 368 aa16.28■□□□□ 0.2
RTFDC1-204ENST00000449062 TXNP10599 105 aaKnown RBP16.28■□□□□ 0.2
RTFDC1-204ENST00000449062 EIF2AK2P19525 551 aaKnown RBP16.28■□□□□ 0.2
RTFDC1-204ENST00000449062 ARHGEF16Q5VV41 709 aa16.28■□□□□ 0.2
RTFDC1-204ENST00000449062 MPHOSPH6Q99547 160 aaKnown RBP16.28■□□□□ 0.2
RTFDC1-204ENST00000449062 MEIS2O14770 477 aa16.27■□□□□ 0.2
RTFDC1-204ENST00000449062 MDM2Q00987 491 aaPredicted RBP16.27■□□□□ 0.2
RTFDC1-204ENST00000449062 IL31RAQ8NI17 732 aa16.27■□□□□ 0.2
RTFDC1-204ENST00000449062 DDX41Q9UJV9 622 aaKnown RBP16.27■□□□□ 0.2
RTFDC1-204ENST00000449062 TBX21Q9UL17 535 aa16.27■□□□□ 0.2
RTFDC1-204ENST00000449062 FRMPD4Q14CM0 1322 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 MYH6P13533 1939 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 A0A0U1RQG5 324 aaPredicted RBP16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 hCG_1642624A0A1W2PR95 340 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 PIK3CDO00329 1044 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 PQBP1O60828 265 aaKnown RBP16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 CD4P01730 458 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 CLTBP09497 229 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 CDC27P30260 824 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 RCAN1P53805 252 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 EVCP57679 992 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 PURAQ00577 322 aaKnown RBP16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 TTLL4Q14679 1199 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 PGM5Q15124 567 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 PPP2R5BQ15173 497 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 LY6KQ17RY6 165 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 SEPT14Q6ZU15 432 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 MICU3Q86XE3 530 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 FAM126BQ8IXS8 530 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 CCDC82Q8N4S0 544 aa16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 JAKMIP1Q96N16 626 aaKnown RBP16.26■□□□□ 0.19
RTFDC1-204ENST00000449062 DCDC2CA8MYV0 355 aa16.25■□□□□ 0.19
RTFDC1-204ENST00000449062 ZBTB43O43298 467 aa16.25■□□□□ 0.19
RTFDC1-204ENST00000449062 ZEB2O60315 1214 aa16.25■□□□□ 0.19
RTFDC1-204ENST00000449062 RPS6KB1P23443 525 aa16.25■□□□□ 0.19
RTFDC1-204ENST00000449062 ARHGAP1Q07960 439 aa16.25■□□□□ 0.19
RTFDC1-204ENST00000449062 ITGA7Q13683 1181 aa16.25■□□□□ 0.19
RTFDC1-204ENST00000449062 USP17L6PQ6QN14 398 aa16.25■□□□□ 0.19
RTFDC1-204ENST00000449062 SYNE3Q6ZMZ3 975 aa16.25■□□□□ 0.19
RTFDC1-204ENST00000449062 Q6ZUG5 572 aa16.25■□□□□ 0.19
RTFDC1-204ENST00000449062 FCHSD1Q86WN1 690 aa16.25■□□□□ 0.19
RTFDC1-204ENST00000449062 BADQ92934 168 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms