RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 FAM50BQ9Y247 325 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 GPR55Q9Y2T6 319 aaPredicted RBP6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 WASHC2AQ641Q2 1341 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 A6NNZ2 444 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 TGM5O43548 720 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 ALBP02768 609 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 SLC5A1P13866 664 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 TTLL4Q14679 1199 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 PPP2R5DQ14738 602 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 EXOSC6Q5RKV6 272 aaKnown RBP6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 CDC37L1Q7L3B6 337 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 OVCH1Q7RTY7 1134 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 PNMA8AQ86V59 439 aaPredicted RBP6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 C11orf74Q86VG3 221 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 MAP4K3Q8IVH8 894 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 TMTC2Q8N394 836 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 SLC35G2Q8TBE7 412 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 LRGUKQ96M69 825 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 HERPUD2Q9BSE4 406 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 ASPNQ9BXN1 380 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 TMPRSS13Q9BYE2 586 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 CABP5Q9NP86 173 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 NMRK2Q9NPI5 230 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 GPR27Q9NS67 375 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 KCNK4Q9NYG8 393 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 SAP30BPQ9UHR5 308 aaKnown RBP6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 ZKSCAN5Q9Y2L8 839 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 COQ6Q9Y2Z9 468 aa6.62□□□□□ -1.35
TM9SF3-202ENST00000443638 ABHD14A-ACY1A0A1B0GW23 586 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 NEURL1BA8MQ27 555 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 LRIG2O94898 1065 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 HSPA6P17066 643 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 RHCEP18577 417 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 HALP42357 657 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 ALDH5A1P51649 535 aaPredicted RBP6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 KPNA1P52294 538 aaPredicted RBP6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 RBM10P98175 930 aaKnown RBP6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 AMPD2Q01433 879 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 RHDQ02161 417 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 NOL9Q5SY16 702 aaKnown RBP6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 ANO1Q5XXA6 986 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 PGM2L1Q6PCE3 622 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 ARMCX6Q7L4S7 300 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 MTDHQ86UE4 582 aaKnown RBP6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 AMOTL1Q8IY63 956 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 ANKRD42Q8N9B4 389 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 FRS2Q8WU20 508 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 RNF141Q8WVD5 230 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 DIO2Q92813 273 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 TRMT2BQ96GJ1 504 aaKnown RBP6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 MCMBPQ9BTE3 642 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 NAA15Q9BXJ9 866 aaKnown RBP6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 PRDM14Q9GZV8 571 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 NLRC4Q9NPP4 1024 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 RAD18Q9NS91 495 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 OXSMQ9NWU1 459 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 MKS1Q9NXB0 559 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 ST14Q9Y5Y6 855 aa6.61□□□□□ -1.35
TM9SF3-202ENST00000443638 PTPDC1A2A3K4 754 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 NPHP1O15259 732 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 MSCO60682 206 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 VAMP4O75379 141 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 HRGP04196 525 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 MYL3P08590 195 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 SRGNP10124 158 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 AKAP5P24588 427 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 LMOD3Q0VAK6 560 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 SCRN1Q12765 414 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 SNW1Q13573 536 aaKnown RBP6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 GAS6Q14393 721 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 EFCAB2Q5VUJ9 269 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 MSL1Q68DK7 614 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 GPAT2Q6NUI2 795 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 XRRA1Q6P2D8 792 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 LBX2Q6XYB7 198 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 WFDC8Q8IUA0 241 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 ZC3H7AQ8IWR0 971 aaKnown RBP6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 PPIL6Q8IXY8 311 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 SMAP1Q8IYB5 467 aaPredicted RBP6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 CPXCR1Q8N123 301 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 EFHBQ8N7U6 833 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 MFSD2AQ8NA29 543 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 XAGE3Q8WTP9 111 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 NANOS1Q8WY41 292 aaKnown RBP6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 ZDHHC15Q96MV8 337 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 H2AFY2Q9P0M6 372 aaPredicted RBP6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 FBXL21Q9UKT6 434 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 IPPQ9Y573 584 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 MRFAP1Q9Y605 127 aa6.6□□□□□ -1.35
TM9SF3-202ENST00000443638 MEGF11A6BM72 1044 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 IL33O95760 270 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 APPP05067 770 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 THBDP07204 575 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 FAM163BP0C2L3 166 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 ADH5P11766 374 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 ITIH2P19823 946 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 MX2P20592 715 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 MAN1A1P33908 653 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 CD68P34810 354 aaPredicted RBP6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 GPR3P46089 330 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms