RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 MCATQ8IVS2 390 aaKnown RBP5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 RPUSD2Q8IZ73 545 aaKnown RBP5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 CHCHD4Q8N4Q1 142 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 KIAA1958Q8N8K9 716 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 C17orf50Q8WW18 174 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 RELTQ969Z4 430 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 SYAP1Q96A49 352 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 SLC39A13Q96H72 371 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 CDHR1Q96JP9 859 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 GPR62Q9BZJ7 368 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 TMCC3Q9ULS5 477 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 TTF2Q9UNY4 1162 aaKnown RBP5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 ADGRL1O94910 1474 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 A0A0G2JLL6 359 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 CCDC66A2RUB6 948 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 TMEM110-MUSTN1A8MSY1 372 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 PEX10O60683 326 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 S100BP04271 92 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 BMP7P18075 431 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 STIP1P31948 543 aaKnown RBP5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 ETV3P41162 512 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 INHBEP58166 350 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 CCDC15Q0P6D6 951 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 SAFB2Q14151 953 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 NFE2L2Q16236 605 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 LONRF1Q17RB8 773 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 AGMOQ6ZNB7 445 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 TSPYL5Q86VY4 417 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 LILRA2Q8N149 483 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 CCDC191Q8NCU4 936 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 TBC1D22AQ8WUA7 517 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 STAG1Q8WVM7 1258 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 ACSF2Q96CM8 615 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 SHISA4Q96DD7 197 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 ASB16Q96NS5 453 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 IPO9Q96P70 1041 aaKnown RBP5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 KCNC2Q96PR1 638 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 CEP89Q96ST8 783 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 SGPP1Q9BX95 441 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 RWDD1Q9H446 243 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 ZNF552Q9H707 407 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 RMI1Q9H9A7 625 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 PCDH12Q9NPG4 1184 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 DUSP13Q9UII6 198 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 MAFFQ9ULX9 164 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 JAG2Q9Y219 1238 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 YBX2Q9Y2T7 364 aaKnown RBP5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 SLC45A1Q9Y2W3 748 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 SNAPC4Q5SXM2 1469 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 CEP162Q5TB80 1403 aa5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 TARBP1Q13395 1621 aaKnown RBP5.55□□□□□ -1.52
HMGB3P9-201ENST00000441799 ABCC10Q5T3U5 1492 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 IFRD1O00458 451 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 LRRN2O75325 713 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 RECKO95980 971 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 HOXD10P28358 340 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 RBM5P52756 815 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 NR0B2Q15466 257 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 ZSCAN26Q16670 478 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 MAP9Q49MG5 647 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 ZNF605Q86T29 641 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 RELL1Q8IUW5 271 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 ELOA2Q8IYF1 753 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 DTWD2Q8NBA8 298 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 TDRD7Q8NHU6 1098 aaKnown RBP5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 GIPC2Q8TF65 315 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 PPM1EQ8WY54 764 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 INTS4Q96HW7 963 aaKnown RBP5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 C8orf48Q96LL4 319 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 IWS1Q96ST2 819 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 IQCGQ9H095 443 aaKnown RBP5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 TRIT1Q9H3H1 467 aaKnown RBP5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 TRPV5Q9NQA5 729 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 GPATCH2Q9NW75 528 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 ASAP1Q9ULH1 1129 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 RABL2BQ9UNT1 228 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 PCDHA11Q9Y5I1 949 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 IKBKGQ9Y6K9 419 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 WRNQ14191 1432 aaPredicted RBP eCLIP5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 ABCC8Q09428 1581 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 TNIKQ9UKE5 1360 aa5.54□□□□□ -1.52
HMGB3P9-201ENST00000441799 TEX51A0A1B0GUA7 166 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 NOTOA8MTQ0 251 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 UPK3BL1B0FP48 263 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 UPK3BL2E5RIL1 263 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 FOXD2O60548 495 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 BBOX1O75936 387 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 LDHAP00338 332 aaKnown RBP5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 RBP3P10745 1247 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 GUCY2CP25092 1073 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 PSMA3P25788 255 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 ALDH1B1P30837 517 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 GTF2A1P52655 376 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 BMS1Q14692 1282 aaKnown RBP5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 CCDC85BQ15834 202 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 RNF187Q5TA31 235 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 CCSAPQ6IQ19 270 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 PDXDC1Q6P996 788 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 ZSCAN29Q8IWY8 852 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 CCDC89Q8N998 374 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms