RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 RSPO2Q6UXX9 243 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 CMIPQ8IY22 773 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 AGGF1Q8N302 714 aaeCLIP5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 CHST14Q8NCH0 376 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 C1orf162Q8NEQ5 155 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 SCARF2Q96GP6 870 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 SARGQ9BW04 601 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 GPR27Q9NS67 375 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 CHST7Q9NS84 486 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 ANKRD6Q9Y2G4 727 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 ST14Q9Y5Y6 855 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 CCDC189A1A4V9 331 aa5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 PTPDC1A2A3K4 754 aa5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 C2orf71A6NGG8 1288 aa5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 ULK1O75385 1050 aa5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 RECQLP46063 649 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 KPNA1P52294 538 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 POU4F1Q01851 419 aa5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 LONRF3Q496Y0 759 aa5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 ACBD5Q5T8D3 534 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 LBX2Q6XYB7 198 aa5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 C11orf74Q86VG3 221 aa5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 CLIP3Q96DZ5 547 aa5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 SEMA6CQ9H3T2 930 aa5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 TAGLN3Q9UI15 199 aa5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 INTUQ9ULD6 942 aa5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 PNMA8BQ9ULN7 279 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 BACE2Q9Y5Z0 518 aa5.2□□□□□ -1.58
CDC42BPA-207ENST00000441725 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 AURKAO14965 403 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 MEFVO15553 781 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 DYNC1LI2O43237 492 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 YBX3P16989 372 aaKnown RBP eCLIP5.19□□□□□ -1.583e-6■□□□□ 8.2
CDC42BPA-207ENST00000441725 PAK1Q13153 545 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 RALBP1Q15311 655 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 CREB3L3Q68CJ9 461 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 PGM2L1Q6PCE3 622 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 OVCH1Q7RTY7 1134 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 PNMA8AQ86V59 439 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 PJA1Q8NG27 643 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 FBXO41Q8TF61 875 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 FAXDC2Q96IV6 333 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 Q96M66 194 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 LRGUKQ96M69 825 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 FCRL3Q96P31 734 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 SHISA3A0PJX4 238 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 IFIT2P09913 472 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 U2AF1L5P0DN76 240 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 PLS3P13797 630 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 HOXB4P17483 251 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 LTBRP36941 435 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 PREPP48147 710 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 U2AF1Q01081 240 aaKnown RBP eCLIP5.19□□□□□ -1.587e-7■■■■□ 23.3
CDC42BPA-207ENST00000441725 SETQ01105 290 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 OCRLQ01968 901 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 NMIQ13287 307 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 GRM3Q14832 879 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 DDB1Q16531 1140 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 TMEM240Q5SV17 173 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 CDPF1Q6NVV7 123 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 DTWD2Q8NBA8 298 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 SLC5A5Q92911 643 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 ALG1Q9BT22 464 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 CLEC1BQ9P126 229 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 DDX20Q9UHI6 824 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 TPX2Q9ULW0 747 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 RNF112Q9ULX5 631 aa5.19□□□□□ -1.58
CDC42BPA-207ENST00000441725 CCDC66A2RUB6 948 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 PCDHGA12O60330 932 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 EOMESO95936 686 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 ASGR2P07307 311 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 NFICP08651 508 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 NBPF7P0C2Y1 421 aaPredicted RBP5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 LPOP22079 712 aaPredicted RBP5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 DNM2P50570 870 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 SESN3P58005 492 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 FAPQ12884 760 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 GALEQ14376 348 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 TESK1Q15569 626 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 BROXQ5VW32 411 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 CWF19L1Q69YN2 538 aaKnown RBP5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 ANKRD34AQ69YU3 496 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 CISD2Q8N5K1 135 aaKnown RBP5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 E2F7Q96AV8 911 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 UBA5Q9GZZ9 404 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 USP25Q9UHP3 1055 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 GIT1Q9Y2X7 761 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 PCDHGA9Q9Y5G4 932 aaKnown RBP5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 PCDHGA8Q9Y5G5 932 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 PCDHGA7Q9Y5G6 932 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 PCDHGA6Q9Y5G7 932 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 PCDHGA3Q9Y5H0 932 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 PCDHGA2Q9Y5H1 932 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 WASHC2AQ641Q2 1341 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 MAFGO15525 162 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 SH3BP5O60239 455 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 FOSP01100 380 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms